New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_tpiA	= 1961824	55 (0.950)	5 (0.090)	5/258	7.0	8.9%	intergenic (+29/‑148)	argS/yecT	arginyl‑tRNA synthetase/uncharacterized protein
	?	NC_000913_3_hsa_tpiA	= 1961834	51 (0.950)					intergenic (+39/‑138)	argS/yecT	arginyl‑tRNA synthetase/uncharacterized protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CACTGCCCGATCCTCAGCGCAGAAAACGAAGAAGTGCGTAACAGCCGTCTAAAACTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913_3_hsa_tpiA/1961667‑1961824 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagcctgatcGGCTAACCCTGATCAGGCTTCACTCTCACGAAAAATCGATTACATACGCTCTACAGTCTCAATACCCAGCGTATCCAGACCCAGCTTCAGCGTCTTCGCCGTCAGTTGTGCCAGTTTTAGACGGCTGTTACGCACTTCTTCGTTT  <  NC_000913_3_hsa_tpiA/1961834‑1961690                                                                                                                                                                                                                                                                                                                 CACTGCCCGATCCTCAGCGCAGAAAACGAAGAAGTGCGTAACAGCCGTCTAAAACTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAA                                                                                                                                                           <  1:898561/150‑1   CTGCCTGATCCTCAGCGCAGAAAACGAAGAAGTGCGTAACAGCCGTCTAAAACTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGC                                                                                                                                                         <  1:161636/150‑1      CCCGATCCTCAGCGCAGAAAACGAAGAAGTGCGTAACAGCCGTCTAAAACTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTG                                                                                                                                                      >  2:533077/1‑150       CCGAACCTCAGCGCAGAAAACGAAGAAGTGCGTAACAGCCGTCTAAAACTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGA                                                                                                                                                     <  2:497715/150‑1        CGATCCTCAGCGCAGAAAACGAAGAAGGGCGTAACAGCCGTCTAAAACTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGAT                                                                                                                                                    <  2:107413/150‑1                             AAGAAGTGCGTAACAGCCGTCTAAAACTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCGGCTAACCCTGATCAGGCTT                                                                                                                               <  1:832011/150‑1                                                                                                         TATTGAGACTGTAGAGCGTATGTAATCGATTTTTCTTGAGAGTGAAGCCTGATCGGCTAACCCTGATCAGGCTTCACTCTCACGAAAAATCGATTACATACGCTCTACAGTCTCAATACCCAACGTATCCAGACCCACCTTCAGCacctt                                                   >  2:564775/1‑145                                                                                                                ACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCGGCTAACCCTGATCAGGC                                                                                                                                 >  1:307504/1‑65                                                                                                                ACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATCGGCTAACCCTGATCAGGC                                                                                                                                 <  2:307504/65‑1                                                                                                                                       TTTTCGTGACCGTCAAGCCTGACCGCCTAACCCCGATCACGCTTCACTCCCACGAAAAATCGATTACATACGCTCTACAGTCTCAATACCCAGCGTATCCAGACCCAGCTTCAGCGTCTTCGCCGTCAGTTGTGCCAGTTTTAGACGGCT                     <  1:564775/150‑1                                                                                                                                                     AAGCCTGATCGGCTAACCCTGATCAGGCTTCACTCTCACGAAAAATCGATTACATACGCTCTACAGTCTCAATACCCAGCGTATCCAGACCCAGCTTCAGCGTCTTCGCCGTCAGTTGTGCCAGTTTTAGACGGCTGTTACGCACTTCTT       >  2:177698/1‑150                                                                                                                                                       GCCTGATCGGCTAACCCTGCTCAGCCGTCACTCTCACGAAAAATCGATTACATACGCTCTACAGTCTCAATACCCAGCGTATCCAGACCCAGCTTCAGCGTCTTCGCCGTCAGTTGTGCCAGTTTTAGACGGCTGTTACGCACTTCTTCG     <  1:493545/150‑1                                                                                                                                                        CCTGATCGGCTAACCCTGATCAGGCTTCACTCTCACGAAAAATCGATTACATACGCTCTACAGTCTCAATACCCAGCGTATCCAGACCCAGCTTCAGCGTCTTCGCCGTCAGTTGTGCCAGTTTTAGACGGCTGTTACGCACTTCTTCGT    >  2:909435/1‑150                                                                                                                                                          TGATCGGCTAACCCTGATCAGGCTTCACTCTCACGAGAAATCGATTACATACGCTCTACAGTCTCAATACCCAGCGTATCCAGACCCAGCTTCAGCGTCTTCGCGGTCAGTTGTGTCGGTTTTAGCCGGCTGTTACGGACTTCTTCGTTT  >  2:356773/1‑150                                                                                                                                                                                                                                                                                                                 CACTGCCCGATCCTCAGCGCAGAAAACGAAGAAGTGCGTAACAGCCGTCTAAAACTGGCACAACTGACGGCGAAGACGCTGAAGCTGGGTCTGGATACGCTGGGTATTGAGACTGTAGAGCGTATGTAATCGATTTTTCGTGAGAGTGAAGCCTGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913_3_hsa_tpiA/1961667‑1961824 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagcctgatcGGCTAACCCTGATCAGGCTTCACTCTCACGAAAAATCGATTACATACGCTCTACAGTCTCAATACCCAGCGTATCCAGACCCAGCTTCAGCGTCTTCGCCGTCAGTTGTGCCAGTTTTAGACGGCTGTTACGCACTTCTTCGTTT  <  NC_000913_3_hsa_tpiA/1961834‑1961690

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.