New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_tpiA = 2290113NA (NA)52 (1.470) 33/280 0.2 98.1% intergenic (‑32/+1) insH1/yejO IS5 transposase and trans‑activator/pseudogene, autotransporter outer membrane homology;putative transport; Not classified; putative ATP‑binding component of a transport system
?NC_000913_3_hsa_tpiA = 3654601 1 (0.030)intergenic (+74/‑82) slp/dctR outer membrane lipoprotein/Putative LuxR family repressor for dicarboxylate transport

Only 100 of 104 total aligned reads displayed.

TGGCCGGAACCGGGCTGGGGTGCGCCTTACTACACCAATGCGGTGAGTCAGGTAACACCTGAGCTGGTCAAATAACACCACCGAAAGATGCAGATGCTTTCTCAGCATCTGCATCATGCATTACATCAAATTAATACACAGTAAGCTAACTATTATTATTATAAGCCCTGTCCTGTTAATTACCTTTGGCAAACTGATTATAAAGTTAATGTCCGCACCAGGAGTCGGTTATGTTTCTTATAATTACCAGGGATACGATGTTCTTCACCGCGATGAAAAACATTCTGAGTAAAGGTA  >  NC_000913_3_hsa_tpiA/3654453‑3654749
                                                                                                                                                    |                                                                                                                                                    
aactggggatgacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa                                                                                                                                                      >  1:605813‑M2/146‑149 (MQ=255)
aactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa                                                                                                                                                      <  2:41980‑M2/4‑1 (MQ=255)
aactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa                                                                                                                                                      >  1:164957‑M2/146‑149 (MQ=255)
aactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa                                                                                                                                                      <  2:486461‑M2/4‑1 (MQ=255)
aactggggataacgcctgaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgggtcagccgagaagaatttccccgcttattcgcaccttccCTaa                                                                                                                                                      <  2:498044‑M2/4‑1 (MQ=255)
 actgtggataacgccttaaatggcgaagaatcggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgatatgactgtgtcagccgagaagaatttccccgcttattcgcaccttccCTAAc                                                                                                                                                     <  2:589242‑M2/5‑1 (MQ=255)
 actggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAc                                                                                                                                                     <  1:125450‑M2/5‑1 (MQ=255)
 actggggataacgccttaaatggcgaagaaacggtctaaatagcctgattcaaggcatttacgggagaaaaaatcggcccaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAc                                                                                                                                                     <  1:30749‑M2/5‑1 (MQ=255)
     ggAACCGGGTTGGGGTGCGCCTTACTACCCCAATGCGGTGAGTCAGGTAACACCTGAGCTGGTCAAATAACACCACCGAAAGATGCAGATGCTTTCTCAGCATCTGCATCATGCATTACATCAAATTAATACACAGTAAGCTAAggaag                                                                                                                                                 >  2:344899‑M2/1‑144 (MQ=255)
       gataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcgCTAACtattat                                                                                                                                               >  1:212812‑M2/139‑149 (MQ=255)
       gataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACtattat                                                                                                                                               <  1:181162‑M2/11‑1 (MQ=255)
       gataacgcctgaaatggcgaagaaacggtctaaataggcggattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagacagccgagaagaatttcccctcttattcgcaccttccCTAACtattat                                                                                                                                               <  1:181191‑M2/11‑1 (MQ=255)
       aaCCGGGCTGGGGTGCGCCTTACTACACCAATGCGGTGAGTCAGGTAACACCTGAGCTGGTCAAATAACACCACCGAAAGATGCAGATGCTTTCTCAGCATCTGCATCATGCATTACATCAAATTAATACACAGTAAGCTAAggaaggt                                                                                                                                               >  1:197074‑M2/1‑142 (MQ=255)
         ccGGGCTGGGGTGCGCCTTACTACACCAAGGCGGTGAGTCAGGTAACACCTGAGCTGGTCAAATAACACCACCGAAAGATGCAGATGCTTTCTCAGCATCTGCATCATGCATTACATCAAATTAATACACAGTAAGCTAAggaaggtgc                                                                                                                                             >  2:244335‑M2/1‑140 (MQ=255)
           acgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACtattattatt                                                                                                                                           >  1:223693‑M2/135‑149 (MQ=255)
               cttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACTATTATTATTATaa                                                                                                                                       <  1:621381‑M2/19‑1 (MQ=255)
                     tggcgaagaaacggtctaaatagtctgattcaaggcactcacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagtagaatttccccgcttattcgcaccttccCTAACTATTATTAATATAAGCcctg                                                                                                                                 <  1:409832‑M2/25‑1 (MQ=255)
                       gcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgcctgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACTATTATTATTATAAGCcctgtc                                                                                                                               <  1:276874‑M2/27‑1 (MQ=255)
                        cgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcctattcgcaccttccCTAACTATAATTATTATAAACcctgacc                                                                                                                              >  2:433285‑M2/122‑149 (MQ=255)
                         cTTACTACACCAATGCGGTGAGTCAGGTAACACCTGAGCTGGTCAAATAACACCACCGAAAGATGCAGATGCTTTCTCAGCATCTGCATCATGCATTACATCAAATTAATACACAGTAAGCTAAggaaggttcgaacaagtccctgata                                                                                                                             <  2:564838‑M2/149‑26 (MQ=255)
                          ttACTACACCAATGCGGTGAGTCAGGTAACACCTGAGCTGGTCAAATAACACCACCGAAAGATGCAGATGCTTTCTCAGCATCTGCATCATGCATTACATCAAATTAATACACAGTAAGCTAAgggaggtgcgaacaagtcgttgatat                                                                                                                            >  2:573273‑M2/1‑123 (MQ=255)
                          ttACTACACCAATGCGGTGAGTCAGGTAACACCTGAGCTGGTCAAATAACACCACCGAAAGATGCAGATGCTTTCTCAGCATCTGCATCATGCATTACATCAAATTAATACACAGTAAGCTAAggaaggtgcgaacaagtccctgatat                                                                                                                            >  2:297991‑M2/1‑123 (MQ=255)
                            actacACCAATGCGGTGAGTCAGGTAACACCTGAGCTGGTCAAATAACACCACCGAAAGATGCAGATGCTTTCTCAGCATCTGCATCATGCATTACATCAAATTAATACACAGTAAGCTAAggaaggtgcgaacaagtccctgatatga                                                                                                                          >  2:305966‑M2/1‑121 (MQ=255)
                               tcaccAATGCGGTGAGTCAGGTAACACCTGAGCTGGTCAAATAACACCACCGAAAGATGCAGATGCTTTCTCAGCATCTGCATCATGCATTACATCAAATTAATACACAGTAAGCTAAggaaggtgcgaacaagtccctgatatgagat                                                                                                                       >  1:431496‑M2/2‑118 (MQ=255)
                               acggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACTATTATTATTATAAGCCCTGTCCTGTTAAt                                                                                                                       >  2:545173‑M2/115‑149 (MQ=255)
                                cacCAATGCGGTGAGTCAGGTAACACCTGAGCTGGTCAAATAACACCACCGAAAGATGCAGATGCTTTCTCAGCATCTGAATATTGCCTGAGATCAAATTTATGCCCAGTAAGCTAAggaaggtgcgaacaagtccctgatatgagatc                                                                                                                      <  1:240960‑M2/149‑33 (MQ=255)
                                 acCAATGCGGTGAGTCAGGTAACACCTGAGCTGGTCAAATAACACCACCGAAAGATGCAGATGCTTTCTCAGCATCTGCATCATGCATTACATCAAATTAATACACAGTAAGCTAAggaaggtgcgaacaagtccctgatatgagatca                                                                                                                     <  1:363349‑M2/149‑34 (MQ=255)
                                   cAATGCGGTGAGTCAGGTAACACCTGAGCTGGTCAAATAACACCACCGAAAGATGCAGATGCTTTCTCAGCATCTGCATCATGCATTACATCAAATTAATACACAGTAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatg                                                                                                                   <  1:257010‑M2/149‑36 (MQ=255)
                                   cAATGCGGTGAGTCAGGTAACACCTGAGCTGGTCAAATAACACCACCGAAAGATGCAGATGCTTTCTCAGCATCTGCATCATGCATTACATCAAATTAATACACAGTAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatg                                                                                                                   <  1:412590‑M2/149‑36 (MQ=255)
                                   cAATGCGGTGAGTCAGGTAACACCTGAGCTGGTCAAATAACACCACCGAAAGATGCAGATGCTTTCTCAGCATCTGCATCATGCATTACATCAAATTAATACACAGTAAGCTAAggaaggtgcgaacaagtccctgatat                                                                                                                            <  1:10323‑M2/140‑27 (MQ=255)
                                      aaataggtcgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagacttttcccgcttattcgcggctgccCTAACTATTATTATTATAAGCCCTGTCCTGTTAATTACCttt                                                                                                                <  1:612500‑M2/42‑1 (MQ=255)
                                       aataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACTATTATTATTATAAGCCCTGTCCTGTTAATTACCTTTg                                                                                                               <  2:112550‑M2/43‑1 (MQ=255)
                                        agaggttgatttaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACTATTATTATTATAAGCCCTGTCCTGTTAATTACCTTTgg                                                                                                              <  2:48492‑M2/44‑1 (MQ=255)
                                           tGAGTCAGGTATCACTGGAGCTGGTCAAATAACACCACCGAAAGATGCAGATGCTTTCTCAGCATCTGCATCATGCATTACATCAAATTAATACACAGTAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcat                                                                                                           >  2:432921‑M2/1‑106 (MQ=255)
                                             ctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACTATTATTATTATAAGCCCTGTCCTGTTAATTACCTTTGGCAAAc                                                                                                         >  1:184333‑M2/101‑149 (MQ=255)
                                             aGTCAGGTAACACCTGAGCTGGTCAAATAACACCACCGAAAGATGCAGATGCTTTCTCAGCATCTGCATCATGCATTACATCAAATTAATACACAGTAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatct                                                                                                         <  1:522144‑M2/149‑46 (MQ=255)
                                               tCAGGTAACACCTGAGCTGGTCAAATAACACCACCGAAAGATGCAGATGCTTTCTCAGCATCTGCATCATGCATTACATCAAATTAATACACAGTAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgg                                                                                                       <  1:313020‑M2/149‑48 (MQ=255)
                                                 ttcaaggcatttacggaagaaaaaatcggctcaaacatgaagaaatgaaattactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACTATTATTATTATAAGCCCTGTCCTGTTAATTACCTTTGGCAAACTGAt                                                                                                     <  1:291721‑M2/53‑1 (MQ=255)
                                                  tcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACTATTATTATTATAAGCCCTGTCCTGTTAATTACCTTTGGCAACCTGAtt                                                                                                    <  2:530630‑M2/54‑1 (MQ=255)
                                                   gTAACACCTGAGCTGGTCAAATAACACCACCGAAAGATGCAGATGCTTTCTCAGCATCTGCATCATGCATTACATCAAATTAATACACAGTAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagcc                                                                                                   <  1:508422‑M2/149‑52 (MQ=255)
                                                    tAACACCTGAGCTGGTCAAATAACACCACCGAAAGATGCAGATGCTTTCTCAGCATCTGCATCATGCATTACATCAAATTAATACACAGTAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagcca                                                                                                  <  1:507686‑M2/149‑53 (MQ=255)
                                                     aaCACCTGAGCTGGTCAAATAACACCACCGAAAGATGCAGATGCTTTCTCAGCATCTGCATCATGCATTACATCAAATTAATACACAGTAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccat                                                                                                 <  1:85363‑M2/149‑54 (MQ=255)
                                                       gcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagacgagaagaatttccccgcttattcgcaccttccCTAACTATTATTATTATAAGCCCTGTCCTGTTAATTACCTTTGGCAAACTGATTAtaac                                                                                               >  2:176908‑M2/91‑148 (MQ=255)
                                                       gcatttacgggagaaaaaaccggttcaaatctgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACTATTATTATTATAAGCCCTGTCCTGTTAATTACCTTTGGCAAACTGATTATaaa                                                                                               <  1:155339‑M2/59‑1 (MQ=255)
                                                             acgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACTATTATTATTATAAGCCCTGTCCTGTTAATTACCTTTGGCAAACTGATTATAAAGTTAAt                                                                                         <  2:141761‑M2/65‑1 (MQ=255)
                                                             aGCTGGTCAAATAACACCACCGAAAGATGCAGATGCTTTCTCAGCATCTGAATCATGGATTACATCAAATTAATACACAGTAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagg                                                                                         >  1:430357‑M2/1‑88 (MQ=255)
                                                               gggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACTATTATTATTATAAGCCCTGTCCTGTTAATTACCTTTGGCAAACTGATTATAAAGTTAATGt                                                                                       <  2:223693‑M2/67‑1 (MQ=255)
                                                                tGGACAAATAACACCACCGAAAGATGCAGATGCTTTCTCAGCATCTGCATCATGCATTACATCAAATTAATACACAGTAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggtt                                                                                      >  1:204581‑M2/1‑85 (MQ=255)
                                                                ggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACTATTATTATTATAAGCCCTGTCCTGTTAATTACCTTTGGCAAACTGATTATAAAGTTAATGTc                                                                                      <  1:534466‑M2/68‑1 (MQ=255)
                                                                 gagaaaaaatcggctcaaacttgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACTATTATTATTATAAGCCCTGTCCTGTCAATTACCTTTGGCAAACTGATTATAAAGTTAATGTcc                                                                                     <  2:329111‑M2/69‑1 (MQ=255)
                                                                   gacaaaaacgcctgaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACTATTATTATTATAAGCCCTGTCCTGTTAATTACCTTTGGCAAACTGATTATAAAGTTAATGTCCGc                                                                                   >  2:107242‑M2/79‑149 (MQ=255)
                                                                     aaaTAACACCACCGAAAGATGCAGATGCTTTCTCAGCATCTGCATCATGCATTACATCAAATTAATACACAGTAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatca                                                                                 <  1:242795‑M2/149‑70 (MQ=255)
                                                                        tAACACCACCGAAAGATGCAGATGCTTTCTCAGCATCTGCATCATGCATTACATCAAATTAATACACAGTAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccctagaacagggttcatcatga                                                                              >  2:232192‑M2/1‑77 (MQ=255)
                                                                        tAACACCACCGAAAGATGCAGATGCTTTCTCAGCATCTGCATCATGCATTACATCAAATTAATACACAGTAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga                                                                              >  1:46880‑M2/1‑77 (MQ=255)
                                                                        aatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACTATTATTATTATAAGCCCTGTCCTGTTAATTACCTTTGGCAAACTGATTATAAAGTTAATGTCCGCACCAg                                                                              <  1:601597‑M2/76‑1 (MQ=255)
                                                                              caccGAAAGATGCAGATGCTTTCTCAGCATCTGCATCATGCATTACATCAAATTAATACACAGTAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatc                                                                        >  2:389341‑M2/1‑71 (MQ=255)
                                                                              caccGAAAGATGCAGATGCTTTCTCAGCATCTGCATCATGCATTACATCAAATTAATACACAGTAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagg                                                                                         >  1:240376‑M2/1‑71 (MQ=255)
                                                                              caccGAAAGATGCAGATGCTTTCTCAGCATCTGCATCATGCATTACATCAAATTAATACACAGTAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagg                                                                                         <  2:240376‑M2/132‑62 (MQ=255)
                                                                              cacaGAAAGATGCAGATGCTTTCTCAGCATCTGCATCATGCATTACATCAAATTAATACACAGTAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatc                                                                        >  2:91985‑M2/1‑71 (MQ=255)
                                                                                 aaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACTATTATTATTATAAGCCCTGTCCTGTTAGTTACCTTTGGCAAACTGATTATAAAGTTAATGTCCGCACCAGGAGTCGGtt                                                                     >  2:588549‑M2/65‑149 (MQ=255)
                                                                                 aaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACTATTATTATTATAAGCCCTGTCCTGTTAATTACCTTTGGCAAACTGATTATAAAGTTAATGTCCGCACCAGGAGTCGGtt                                                                     >  2:196929‑M2/65‑149 (MQ=255)
                                                                                  gAAAGATGCAGATGCTTTCTCAGCATCTGCATCATGCATTACATCAAATTAATACACAGTAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaact                                                                    <  1:232962‑M2/149‑83 (MQ=255)
                                                                                        tgcagatgcTTTCTCAGCATCTGCATCATGCATTACATCAAATTAATACACAGTAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacctt                                                              >  2:507686‑M2/1‑61 (MQ=255)
                                                                                             atgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACTATTATTATTATAAGCCCTGTCCTGTTAATTACCttt                                                                                                                <  2:217763‑M2/42‑1 (MQ=255)
                                                                                             atgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACTATTATTATTATAAGCCCTGTCCTGTTAATTACCttt                                                                                                                >  1:217763‑M2/53‑94 (MQ=255)
                                                                                             atgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACTATTATTATTATAAGCCCTGTCCTGTTAATTACCTTTGGCAAACTGATTATAAAGTTAATGTCCGCACCAGGAGTCGGTTATGTTTCTtata                                                         <  2:421247‑M2/97‑1 (MQ=255)
                                                                                                 tttCTCAGCATCTGCATCATGCATTACCTCAAATTAATACACAGTAAGCTCAggaagaagcgaacaactccctgatatgaaatcatgtttgtcatctggagccatagaacagggttcatcatgagccatcaacttaccttcgccgacag                                                     <  2:148421‑M2/149‑98 (MQ=255)
                                                                                                    gactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACTATTATTATTATAAGCCCTGTCCTGTTAATTACCTTTGGCAAACTGATTATAAAGTTAATGTCCGCACCAGGAGTCGGTTATGTTTCTTATAATTACCa                                                  <  1:107242‑M2/104‑1 (MQ=255)
                                                                                                       aGCATCTGCATCATGCATTACATCAAATTAATACACAGTAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgactt                                               <  2:154643‑M2/149‑104 (MQ=255)
                                                                                                        gagtcagcctagaataatttccccgcttattcgcatcttccCTAACTATTATTATTATAAGCCCTGTCCTGTTAATTACCTTTGGCAAACTGATTATAAAGTTAATGTCAGCGTCGCGAGGCGGTTATGTTTCTTATAATTACCAGGGa                                              <  2:447662‑M2/108‑1 (MQ=255)
                                                                                                        gCATCTGCATCATGCATTACATCAAATTAATACACAGTAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattc                                              >  2:508422‑M2/1‑45 (MQ=255)
                                                                                                          gtcagccgagaagaatttccccgcttattggcaccttccCTAACTATTATTATTATAAGCCCTGTCCTGTTAATTACCTTTGGCAAACTGATTATAAAGTTAATGTCCGCACCAGGAGTCGGTTATGTTTCTTATAATTACCAGGGATa                                            <  2:337943‑M2/110‑1 (MQ=255)
                                                                                                           tcagccgagaagaatttccccgcttattctcaccttccCTAACTATTATTATTATAAGCCCTGTCCTGTTAATTACCTTTGGCAAACTGATTATAAAGTTAATGTCCGCACCAGGAGTCGGTTATGTTTCTTATAATTACCAGGGATAc                                           <  1:231585‑M2/111‑1 (MQ=255)
                                                                                                                atcatGCATTACATCAAATTAATACACAGTAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaa                                      >  2:232962‑M2/1‑37 (MQ=255)
                                                                                                                atcatGCATTACATCAAATTAATACACAGTAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaa                                      >  2:412590‑M2/1‑37 (MQ=255)
                                                                                                                  catGCATTACATCAAATTAATACACAGTAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagc                                    >  2:85363‑M2/1‑35 (MQ=255)
                                                                                                                  agaagaatttccccgcttattcgcaccttccCTAACTATTATTATTATAAGCCCTGTCCTGTTAATTACCTTTGGCAAACTGATTATAAAGTTAATGTCCGCACCAGGAGTCGGTTATGTTTCTTATAATTACCAGGGATACGATGttc                                    <  1:535897‑M2/118‑1 (MQ=255)
                                                                                                                  agaagaatttccccgcttattcgcaccttccCTAACTATTATTATTATAAGCCCTGTCCTGTTAATTACCTTTGACAAACTGATTATAAAGTTAATGTCCGCACCAGGAGTCGCTTATGTTTCTTATAATTACCGGGGATACGGTGttc                                    >  2:120719‑M2/32‑149 (MQ=255)
                                                                                                                    tGAATTAGATCAAATTAAAACAAATTAGTCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgc                                  >  2:621734‑M2/1‑33 (MQ=255)
                                                                                                                      gaatttccccgcttattcgcaccttccATAACTATTATTATTATAAGCCCTGTCCTGTTAATTACCTTTGGCAAACTGATTATAAAGTTAATGTCCGCACCAGGAGTCGGTTATGTTTCTTATAATTACCAGGGATACGATGTTCTTCa                                >  2:293896‑M2/28‑149 (MQ=255)
                                                                                                                             tCAAATTAATACACAGTAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagacc                         <  1:589401‑M2/149‑126 (MQ=255)
                                                                                                                              ccgcttattcgcaccttccCTAACTATTATTATTATAAGCCCTGTCCTGTTAATTACCTTTGGCAAACTGATTATAAAGTTAATGTCCGCACCAGGAGTGGGTTATGTTTCTTATAATTACCAGGAATACAATGTTCTTCACCGCGGTg                        >  2:256054‑M2/20‑149 (MQ=255)
                                                                                                                                     ttcgcaccttccCTAACTATTATTATTATAAGCCCTGTCCTGTTAATTACCTTTGGCAAACTGATTATAAAGTTAATGTCCGCACCAGGAGTCGGTTATGTTTCTTATAATTACCAGGGATACGATGTTCTTCACCGCGATGAAAAACa                 <  1:545173‑M2/137‑1 (MQ=255)
                                                                                                                                     aTACACAGTAAGCTAAggaaggtgcgaacaagtacctgatatgagatcatgtttgtcatgtggagcaatagaacagggttcatcatgagtcatcaacttacattcgcagaaagtgaattgagcagtaagcgccgtaagatcagaaaaga                 <  2:32349‑M2/149‑134 (MQ=255)
                                                                                                                                       cgcaccttccCTAACTATTATTATTATAAGCCCTGTCCTGTTAATTACCTTTGGCAAACTGATTATAAAGTTAATGTCCGCACCAGGAGTCGGTTATGTTTCTTATAATTACCAGGGATACGATGTTCTTCACCGCGATGAAAAACAtt               <  1:293896‑M2/139‑1 (MQ=255)
                                                                                                                                       acacAGTAAGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagg               <  1:362640‑M2/149‑136 (MQ=255)
                                                                                                                                        gcaccttccCTAACTATTATTATTATAAGCCCTGTCCTGTTAATTACCTTTGGCAAACTGATTATAAAGTTAATGTCCGCACCAGGAGTCGGTTATGTTTCTTATAATTACCAGGGATACGATGTTCTTGACCGCGATGAAACACATTc              >  1:430095‑M2/10‑149 (MQ=255)
                                                                                                                                        gcaccttccCTAACTATTATTATTATAAGCCCTGTCCTGTTAATTACCTTTGGCAAACTGATTATAAAGTTAATGTCCGCACCAGGAGTCGGTTATGTTTCTTATAATTACCAGGGATACGATGTTCTTCACCGCGATGAAAAACATTc              >  1:453467‑M2/10‑149 (MQ=255)
                                                                                                                                          accttccCTAACTATTATTATTATAAGCCCTGTCCTGTTAATTACCTTTGGCAAACTGATTATAAAGTTAATGTCCGCACCAGGAGTCGGTTATGTTTCTTATAATTACCAGGGATACGATGTTCTTCACCGCGATGAAAAACATTCTg            <  2:340754‑M2/142‑1 (MQ=255)
                                                                                                                                          accttccCTAACTATTATTATTATAAGCCCTGTCCTGTTAATTACCTTTGGCAAACTGATTATAAAGTTAATGTCCGCACCAGGAGTCGGTTATGTTTCTTATAATTACCAGGGATACGATGTTCTTCACCGCGATGAAAAACATTCTg            >  1:117113‑M2/8‑149 (MQ=255)
                                                                                                                                                gCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgt      <  2:420011‑M2/149‑145 (MQ=255)
                                                                                                                                                gCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgt      <  2:409125‑M2/149‑145 (MQ=255)
                                                                                                                                                 cTAAggaaggagcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtc     >  2:11906‑M2/1‑4 (MQ=255)
                                                                                                                                                 cTAAggaaagtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcataagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagacaagagactttctggtc     <  1:346975‑M2/149‑146 (MQ=255)
                                                                                                                                                  tAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgt                               >  1:564484‑M2/1‑3 (MQ=255)
                                                                                                                                                  tAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgt                               <  2:564484‑M2/122‑120 (MQ=255)
                                                                                                                                                   aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtccc   <  2:215665‑M2/149‑148 (MQ=255)
                                                                                                                                                   aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtccc   <  2:576859‑M2/149‑148 (MQ=255)
                                                                                                                                                   aaCTATTATTATTATAAGCCCTGTCCTGTTAATTACCTTTGGCAAACTGATTATAAAGTTAATGTCCGCACCAGGAGTCGGTTATGTTTCTTATAATTACCAGGGATACGATGTTCTTCACCGGGATGAAAAACATTCTGAGTAAAGGt   >  1:69056/1‑149 (MQ=255)
                                                                                                                                                    aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccg  <  1:376265‑M2/149‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
TGGCCGGAACCGGGCTGGGGTGCGCCTTACTACACCAATGCGGTGAGTCAGGTAACACCTGAGCTGGTCAAATAACACCACCGAAAGATGCAGATGCTTTCTCAGCATCTGCATCATGCATTACATCAAATTAATACACAGTAAGCTAACTATTATTATTATAAGCCCTGTCCTGTTAATTACCTTTGGCAAACTGATTATAAAGTTAATGTCCGCACCAGGAGTCGGTTATGTTTCTTATAATTACCAGGGATACGATGTTCTTCACCGCGATGAAAAACATTCTGAGTAAAGGTA  >  NC_000913_3_hsa_tpiA/3654453‑3654749

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.