| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_hsa_tpiA | 2110440 = | 25 (0.640) | 3 (0.080) | 3/274 | 5.6 | 9.2% | coding (580/882 nt) | rfbA | glucose‑1‑phosphate thymidylyltransferase |
| ? | NC_000913_3_hsa_tpiA | 2110468 = | 35 (0.920) | coding (552/882 nt) | rfbA | glucose‑1‑phosphate thymidylyltransferase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AAAATTACTTGCTTCTATCAGACTCTGATGAGTCCCCGTGTCCAGCCACGCGTAGCCACGCCCCATCATCGCGACAGACAGACGTCCCTGCTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCAAACTCAACGACACC > NC_000913_3_hsa_tpiA/2110303‑2110581 | aaaaTTACTTGCTTCTATCAGACTCTGATGAGTCCCCGTGTCCAGCCACGCGTAGCCACGCCCCATCATCGCGACAGACAGACGTCCCTGCTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGTGCAGACGGCTTCaa < 2:93445/150‑1 (MQ=255) cTTGCTTCTATCAGACTCTGATGAGTCCCCGTGTCCAGCCACGCGTAGCCACACCCCATCATCGCGACAGACAGACGTCCCTGCTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTc < 2:457544/150‑1 (MQ=255) ttCTATCAGACTCTGATGAGTCCCCGTGTCCAGCCACGCGTAGCCACGCCCCATCATCGCGACAGACAGACGTCCCTGCTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCAt > 1:514252/1‑150 (MQ=255) aCTCTGATGAGTCCCCGTGTCCAGCCACGCGTAGCCACGCCCCATCATCGCGACAGACAGACGTCCCTGCTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCAc < 1:402452/150‑1 (MQ=255) tctGATGAGTCCCCGTGTCCAGCCACGCGTAGCCACGCCCCATCATCGCGACAGACAGACGGCCCTGCTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGTGCAGACGGGTTCAGGTTTTTCGCCATCTGAACCAcgt > 2:468035/1‑150 (MQ=255) tgaGTCCCCGTGTCCAGCCACGCGTAGCCACGCCCCATCATCGCGACAGACAGACGTCCCTGCTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTa > 2:575496/1‑150 (MQ=255) ccGTGTCCAGCCACGCGTAGCCACGCCCCATCATCGCGACAGACAGACGTCCCTGCTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATTTGAACCACGTCGTTATCATaaa > 2:636579/1‑150 (MQ=255) ggtgtGCAGCCACGCGTAGCCACGCGCCATCATCGCGACAGACAGACGTCCCTGCTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATaaaa < 2:343029/149‑1 (MQ=255) cctttCCAGCCACGCGTAGCCACGCCCCATCATCGCGACAGACAGACGTCCCTGCTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATaaaa < 2:343026/146‑1 (MQ=255) gtCCAGCCACGCGTAGCCACGCCCCATCATCGCGACAGACAGACGTCCCTGCTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTa < 2:311413/150‑1 (MQ=255) cgTAGCCACGCCCCATCATCGCGACAGACAGACGTCCCTGCTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTaa > 1:264347/1‑150 (MQ=255) gCCCCATCATCGCGACAGACAGACGTCCCTGCTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGTGCAGACGGCATCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATACAAGTACACACCTGTAACgcggaaca > 2:516685/1‑143 (MQ=255) atcatcGCGACAGACAGACGTCCCTGCTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGGTATCATACAAGTACAGACCTGTAACGGCGTAATTActc > 1:1104/1‑150 (MQ=255) tcGCGAAAGACCGACGTCCCTGCCCAAGATAAATACGGTCACTAGCTTGAATTTCGAACTCACCACGTGCAGACGGCTTCAAGTTTTGCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGGCCTGTAACGGCGTAATTACTCTTTg < 1:364050/150‑1 (MQ=255) gacagacGTCCCTGCTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAAc < 1:559089/150‑1 (MQ=255) cagacGTCCCTGCTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACgg > 1:200588/1‑150 (MQ=255) agacGTCCCTGCTGAAGATAAATACTGTTAATATCTGGAAGTTCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGAAACGGCGTAATTACTCTTTGGTTCTAACGGt < 2:553509/150‑1 (MQ=255) tCCCTGCTCAAGATAAATGCGGTTAATATTTGTAATTTCTAACTCACCACGTGGAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTttc < 2:188709/150‑1 (MQ=255) aCGGGTATTATCTGGAATTTCTAACTCCCCACGTGCAGACGGCTGCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTGCTAACGGTTTTTCTTCCAGACTGATTGCCGt < 2:88232/150‑1 (MQ=255) aaTTTCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCaaa < 2:200588/150‑1 (MQ=255) aCTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCAAACTCAACGa > 1:80937/1‑150 (MQ=255) tCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTAc > 2:332119/1‑63 (MQ=255) tCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTAc < 1:332119/63‑1 (MQ=255) tCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCAAACTCAACGaca > 2:285572/1‑150 (MQ=255) accacGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCAAACTCAACGACAcc > 2:362665/1‑150 (MQ=255) | AAAATTACTTGCTTCTATCAGACTCTGATGAGTCCCCGTGTCCAGCCACGCGTAGCCACGCCCCATCATCGCGACAGACAGACGTCCCTGCTCAAGATAAATACGGTTAATATCTGTAATTTCTAACTCACCACGTGCAGACGGCTTCAAGTTTTTCGCCATCTGAACCACGTCGTTATCATAAAAGTACAGACCTGTAACGGCGTAATTACTCTTTGGTTCTAACGGTTTTTCTTCCAGACTGATTGCCGTACCGTTTTTATCAAACTCAACGACACC > NC_000913_3_hsa_tpiA/2110303‑2110581 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |