New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_tpiA 2544028 =54 (1.380)4 (0.110) 3/270 5.5 7.2% coding (596/792 nt) ucpA furfural resistance protein, putative short‑chain oxidoreductase
?NC_000913_3_hsa_tpiA 2544050 = 52 (1.390)coding (574/792 nt) ucpA furfural resistance protein, putative short‑chain oxidoreductase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CATCCGATGCGAGGAAGGCCGCCAGTTCGCCGACTTCCAGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACGCGAATACCAGACTGCGCGTACTCCACCGCCAGCGATTTTGTCAGGCCAACAATCGCCGCTTTCGTTAAGGCGTACGCCGTTTCGCCAGGATCGGCCACCATATCACCA  >  NC_000913_3_hsa_tpiA/2543912‑2544195
                                                                                                                                          |                                                                                                                                                  
cATCCGATGCGAGGAAGGCCGCCAGTTCGCCGACTTCCAGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCa                                                                                                                                         >  1:513544/1‑150 (MQ=255)
  tCCGATGCGAGGAAGGCCGCCAGTTCGCCGACTTCCAGCGGATCGGCGAGGCGCCGCATCGGCATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGTGTTCGACTTGCGGGCAATGCTTTCCGCCATTGGTGTGCGCAcc                                                                                                                                       >  2:576990/1‑149 (MQ=255)
     gATGCGAGGAAGGCCGCCAGTTCGCCGACTTCCAGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTAt                                                                                                                                    <  2:513544/150‑1 (MQ=255)
          gAGGAAGGCCGCCAGTTCGCCGACTTCCAGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGAGGGCAATGGTTACCTCCATGGGTGTGCGCACGTATccccg                                                                                                                               >  2:316538/1‑148 (MQ=255)
                ggCCGCCAGTTCGCCGACTTCCAGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAAt                                                                                                                         >  2:22667/1‑150 (MQ=255)
                   cgccAGTTCGCCGACTTCCAGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGc                                                                                                                      <  1:218786/150‑1 (MQ=255)
                   cgccAGTTCGCCGACTTCCAGCGGATCGGCGAGGCGACGAATCGAGTTTGCTTTCGCCATTTCATTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGc                                                                                                                      <  2:490505/150‑1 (MQ=255)
                      cAGTTCGCCGACTTCCAGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTCGCCATTGCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAAGGCTTTCCGCCATTCGTGTGCGCACGTATACCGAGCGAATGGCGtt                                                                                                                   >  2:292411/1‑150 (MQ=255)
                           cGCCGACTTCCAGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAAcgc                                                                                                              >  1:684084/1‑150 (MQ=255)
                           cGCCGACTTCCAGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAAcgc                                                                                                              <  1:489357/150‑1 (MQ=255)
                             ccGACTTCCAGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCCCGTATCCCGGGCAAATGGCGTTAACGCGa                                                                                                            >  1:24657/1‑150 (MQ=255)
                               gACTTCCAGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACGCGAAt                                                                                                          <  1:42865/150‑1 (MQ=255)
                                acctCCAGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTCGCCATTTCCGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACGCGAATa                                                                                                         <  1:46556/147‑1 (MQ=255)
                                   tCCAGCGGATCGGCGAGGCGACGCATCGGGGTTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATTTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACGCGAATACCa                                                                                                      <  2:128358/150‑1 (MQ=255)
                                   tCCAGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACGCGAATACCa                                                                                                      <  1:439801/150‑1 (MQ=255)
                                     cAGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTGGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACGCGAATACCAGa                                                                                                    <  2:136167/150‑1 (MQ=255)
                                          gATCGGCGAGGCGACGCATCGGGATTGCGTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGGTCGGCTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATAGCGTTAACGCGAATACCGGGCTgcc                                                                                               >  1:138058/1‑149 (MQ=255)
                                           aTCGGCGAGGCGACGCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACGCGAATACCAGACTgcgc                                                                                              <  2:376516/150‑1 (MQ=255)
                                                    gcgaCGCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACGCGAATACCAGACTGCGCGTACTCCAc                                                                                     >  1:485544/1‑150 (MQ=255)
                                                       aCGCATCGGGATTGCTTTCGCCATTGCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACGCGAATACCAGACTGCGCGTACTCCACCGc                                                                                  <  2:141981/150‑1 (MQ=255)
                                                                 actGCTCTCGCCCTTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACGCGAATACCAGACTGCGCGTACTCCACCGCCAGCGAtttt                                                                        <  1:25062/148‑1 (MQ=255)
                                                                     cTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACGCGAATACCAGACTGCGCGTACTCCACCGCCAGCGATTTTGTCa                                                                    <  2:610391/150‑1 (MQ=255)
                                                                      tttCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGGTAACGCGAATACCAGACTGCGCGTACTCCACCGCCCGCGACTTTGTCAg                                                                   >  2:160710/1‑150 (MQ=255)
                                                                          gCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACGCGAATACCAGACTGCGCGTACTCCACCGCCAGCGATTTTGTCAGGCca                                                               >  2:687615/1‑150 (MQ=255)
                                                                            cATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACGCGAATACCAGACTGCGCGTACTCCACCGc                                                                                  >  2:234860/1‑129 (MQ=255)
                                                                            cATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACGCGAATACCAGACTGCGCGTACTCCACCGc                                                                                  <  1:234860/129‑1 (MQ=255)
                                                                             aTTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACGCGAATACCAGACTGCGCGTACTCCACCGCCAGCGATTTTGTCAGGCcaaca                                                            <  2:256945/150‑1 (MQ=255)
                                                                                   gtcagCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACGCGAATACCAGACTGCGCGTAc                                                                                          <  2:51561/114‑1 (MQ=255)
                                                                                   gtcagCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACGCGAATACCAGACTGCGCGTAc                                                                                          >  1:51561/1‑114 (MQ=255)
                                                                                   gtcagCACCGACTCTGGATCTTCCGGGTTAGAATGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACGCGAATACCAGACTGCGCGTACTCCACCGCCAGCGATTTTGTCAGGCCAACAATcgcc                                                      >  2:310309/1‑150 (MQ=255)
                                                                                    tcagCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACGCGAATACCAGACTGCGCGTACTCCACCGCCAGCGATTTTGTCAGGCCAACAATcgccg                                                     <  2:396730/150‑1 (MQ=255)
                                                                                        cACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACGCGAATACCAGACTGCGCGTACTCCACCGCCAGCGATTTTGTCAGGCCAACAATCGCCGCttt                                                 >  1:633517/1‑150 (MQ=255)
                                                                                        cACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGATAACGCGAATCCCAGACTGCGCGTACTCCACCGCCAGCGATTTTGCAAGGCCAACAATCGCCGCttt                                                 >  2:110341/1‑150 (MQ=255)
                                                                                            gACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACGCGAATACCAGACTGCGCGTACTCCACCGCCAGCGATTTTGTCAGGCCAACAATCGCCGCTTTCGtt                                             >  2:100945/1‑150 (MQ=255)
                                                                                               tctGGATCTTCCGGTTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACGCGAATACCAGACTGCGCGTACTCCACCGCCAGCGATTTTGTCAGGCCAACAATCGCCGCTTTCGTTAAg                                          <  1:310309/150‑1 (MQ=255)
                                                                                                ctGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACGCGAATACCAGACTGCGCGTACTCCACCGCCAGCGATTTTGTCAGGCCAACAATCGCCGCTTTCGTTAAgg                                         >  1:464589/1‑150 (MQ=255)
                                                                                                 tGGATCTTCCGGGTCCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACGCGAATACCAGACTGCGCGTACTCCACCGCCAGCGATTTTGTCAGGCCAACAATCGCCGCTTTCGTTAAGGc                                        >  2:82157/1‑150 (MQ=255)
                                                                                                     tCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACGCGAATACCAGACTGCGCGTACTCCACCGCCAGCGATTTTGTCAGGCCAACAATCGCCGCTTTCGTTAAGGCGTAc                                    >  2:37678/1‑150 (MQ=255)
                                                                                                          cGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACGCGAATACCAGACTGCGCGTACTCCACCGCCAGCGATTTTGTCAGGCCAACAATCGCCGCTTTCGTTAAGGCGTACGCCGt                               >  1:479988/1‑150 (MQ=255)
                                                                                                            ggTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACGCGAATACCAGACTGCGCGTACTCCACCGCCAGCGATTTTGTCAGGCCAACAATCGCCGCTTTCGTTAAGGCGTACGCCGttt                             >  2:585184/1‑150 (MQ=255)
                                                                                                               tCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACGCGAATACCAGACTGCGCGTACTCCACCGCCAGCGATTTTGTCAGGCCAACAATCGCCGCTTTCGTTAAGGCGTACGCCGTTTCGc                          <  1:22667/150‑1 (MQ=255)
                                                                                                                 gACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACGCGAATACCAGACTGCGCGTACTCCACCGCCAGCGATTTTGTCAGGCCAACAATCGCCGCTTTCGTTAAGGCGTACGCCGTTTCGCCa                        >  2:642966/1‑150 (MQ=255)
                                                                                                                 gACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACGCGAATACCAGACTGCGCGTACTCCACCGCCAGCGATTTTGTCAGGCCAACAATCGCCGCTTTCGTTAAGGCGTACGCCGTTTCGCCa                        >  1:205580/1‑150 (MQ=255)
                                                                                                                 gACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACGCGAATACCAGACTGCGCGTACTCCACCGCCAGCGATTTTGTCAGGCCAACAATCGCCGCTTTCGTTAAGGCGTACGCCGTTTCGCCa                        <  1:84848/150‑1 (MQ=255)
                                                                                                                 gACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACGCGAATACCAGACTGCGCGTACTCCACCGCCAGCGATTTTGTCAGGCCAACAATCGCCGCTTTCGTTAAGGCGTACGCCGTTTCGCCa                        <  1:37678/150‑1 (MQ=255)
                                                                                                                      gCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACGCGAATACCAGACTGCGCGTACTCCACCGCCAGCGATTTTGTCAGGCCAACAATCGCCGCTTTCGTTAAGGCGTACGCCGTTTCGCCAGGATc                   <  1:561158/150‑1 (MQ=255)
                                                                                                                         ggCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACGCGAATACCAGACTGCGCGTACTCCACCGCCAGCGATTTTGTCAGGCCAACAATCGCCGCTTTCGTTAAGGCGTACGCCGTTTCGCCAGGATCGGc                <  2:684084/150‑1 (MQ=255)
                                                                                                                            aaTGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACGCGAATACCAGACTGCGCGTACTCCACCGCCAGCGATTTTGTCAGGCCAACAATCGCCGCTTTCGTTAAGGCGTACGCCGTTTCGCCAGGATCGGccac             <  2:551940/150‑1 (MQ=255)
                                                                                                                              tGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACGCGAATACCAGACTGCGCGTACTCCACCGCCAGCGATTTTGTCAGGCCAACAATCGCCGCTTTCGTTAAGGCGTACGCCGTTTCGCCAGGATCGGccacca           <  2:276891/150‑1 (MQ=255)
                                                                                                                                 tttCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACGCGAATACCAGACTGCGCGTACTCCACCGCCAGCGATTTTGTCAGGCCAACAATCGCCGCTTTCGTTAAGGCGTACGCCGTTTCGCCAGGATCGGCCACCatat       >  2:564429/1‑150 (MQ=255)
                                                                                                                                 tttCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACGCGAATACCAGACTGCGCGTACTCCACCGCCAGCGATTTTGTCAGGCCAACAATCGCCGCTTTCGTTAAGGCGTACGCCGTTTCGCCAGGATCGGCCACCatat       >  2:219078/1‑150 (MQ=255)
                                                                                                                                  ttCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATTGCGTTAACGCGAATACCAGACTGCGCGTACTCCACCGCCAGCGATTTTGTCAGGCCAACAATCGCCGCTTTCGTTAAGGCGTACGCCGTTTCGCCAGGATCGGCCACCATATc      >  2:432156/1‑150 (MQ=255)
                                                                                                                                    ccGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACGCGAATACCAGACTGCGCGTACTCCACCGCCAGCGATTTTGTCAGGCCAACAATCGCCGCTTTCGTTAAGGCGTCCGCCGTTTCGCCAGGATCGCCACCACTATCAc    >  2:157119/1‑150 (MQ=255)
                                                                                                                                      gCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACGCGAATACCAGACTGCGCGTACTCCACCGCCAGCGATTTTGTCAGGCCAACAATCGCCGCTTTCGTTAAGGCGTACGCCGTTTCGCCAGGATCGGCCACCATCTCACCa  >  2:469819/1‑150 (MQ=255)
                                                                                                                                          |                                                                                                                                                  
CATCCGATGCGAGGAAGGCCGCCAGTTCGCCGACTTCCAGCGGATCGGCGAGGCGACGCATCGGGATTGCTTTCGCCATTTCAGTCAGCACCGACTCTGGATCTTCCGGGTTCGACTGGCGGGCAATGCTTTCCGCCATTGGTGTGCGCACGTATCCCGGGCAAATGGCGTTAACGCGAATACCAGACTGCGCGTACTCCACCGCCAGCGATTTTGTCAGGCCAACAATCGCCGCTTTCGTTAAGGCGTACGCCGTTTCGCCAGGATCGGCCACCATATCACCA  >  NC_000913_3_hsa_tpiA/2543912‑2544195

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.