New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_tpiA = 120780520 (0.450)13 (0.330) 13/242 NT 34.8% coding (305/630 nt) stfP e14 prophage; uncharacterized protein
?NC_000913_3_hsa_tpiA = 1209602 31 (0.790)pseudogene (18/501 nt) stfE pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related

GTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACA  >  NC_000913_3_hsa_tpiA/1207664‑1207953
                                                                                                                                             |                                                                                                                                                    
gTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCaaaa                                                                                                                                               <  2:71528/149‑1 (MQ=255)
     aGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCaa                                                                                                                                          >  1:210951/1‑149 (MQ=255)
      gCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAAt                                                                                                                                         <  2:827088/149‑1 (MQ=255)
         tagatctgtgttctgatcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATgca                                                                                                                                      >  2:613670‑M1/118‑149 (MQ=255)
           gatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCCATgcagc                                                                                                                                    <  2:188326‑M1/34‑1 (MQ=255)
                  gttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGCTTGGGAGAAGGAGCAAAactaaattcagcgtcgccg                                                                                                                             <  1:14405‑M1/41‑8 (MQ=255)
                          gACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgccttacctgttggtgtcccgcttccgtg                                                                                                                     >  2:482241‑M1/1‑116 (MQ=255)
                          catttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAgg                                                                                                                     >  1:165446‑M1/101‑149 (MQ=255)
                           ctttgtcgatacgcttacacagccaataagcatgttaattccccctgctaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGa                                                                                                                    >  2:59244‑M1/100‑149 (MQ=255)
                                ttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCAc                                                                                                               >  2:483982‑M1/95‑149 (MQ=255)
                                         gtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCAt                                                                                                      <  1:608588‑M1/64‑1 (MQ=255)
                                           acatagccaataagcatgttaaagccccctggtaaacgcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAg                                                                                                    >  1:214519‑M1/84‑149 (MQ=255)
                                             ttCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACGCAATGCAGCAACGGCTACATTAGGACGCACCGGCTTCATAGCt                                                                                                  >  2:746035/1‑149 (MQ=255)
                                                 ggcgctGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacag                                                                                              <  2:335853‑M1/148‑57 (MQ=255)
                                                 ccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttaatcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATAc                                                                                              <  1:489907‑M1/72‑1 (MQ=255)
                                                  gcgcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCCACATTAGGACGCACCGGTTTCATCGCTATAcc                                                                                             >  2:103185/1‑149 (MQ=255)
                                                   cgcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggc                                                                                            >  1:418135‑M1/1‑91 (MQ=255)
                                                    aaaagcatgttaaatccccccggtaaaagcaggaagtatgccatttgcttgttatttcttcattttcataaacgGTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCgg                                                                                           >  1:278987‑M1/75‑149 (MQ=255)
                                                     ctgctgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTACGACGCACCGGTTTCATAGCTATACCGGt                                                                                          >  1:136727/1‑149 (MQ=255)
                                                     ctgctgTTAAGCCGCAAGAACCCGTTTGGCGATACCAAACCGGCTGGCACCGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGt                                                                                          <  1:652765/149‑1 (MQ=37)
                                                      tgctgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctgg                                                                                         >  1:92313‑M1/1‑88 (MQ=255)
                                                       gctgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaaccggctgcc                                                                                        >  1:628205‑M1/1‑87 (MQ=255)
                                                         catgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATg                                                                                      <  1:684001‑M1/80‑1 (MQ=255)
                                                          atgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttaataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCGAGACCGGGTATGa                                                                                     <  1:25976‑M1/81‑1 (MQ=255)
                                                                ccGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGGTtggtg                                                                               >  1:11599/1‑149 (MQ=255)
                                                                aatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGCTtggtg                                                                               <  2:427891‑M1/87‑1 (MQ=255)
                                                                 atccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGTAACGGCTACATTAGTACGCACCGGTTTCATAGCTATACCGGTTATGATtggtgg                                                                              <  1:530937‑M1/88‑1 (MQ=255)
                                                                  gCAAGAATCGGTGTTGCGATATCAAAGCGTAGGGCACGGCGCAAACGACTGTCGAAACCCTTGGTGTGGGAGAAGGctctgcattacctgtgtgtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaat                                                                             <  1:112231‑M1/149‑74 (MQ=255)
                                                                   ccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAAGACGCACCGGTTTCATTGCTATACCGGTTATTATCCGTGGTa                                                                            <  2:340830‑M1/90‑1 (MQ=255)
                                                                    aaGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGCAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgagaggcaatgg                                                                           >  2:576071‑M1/1‑74 (MQ=255)
                                                                     ccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGGGGTAtt                                                                          <  1:163853‑M1/92‑1 (MQ=255)
                                                                       aaTCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGa                                                                        <  2:655257/149‑1 (MQ=255)
                                                                       aaTCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGa                                                                        <  1:785529/149‑1 (MQ=255)
                                                                        tggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAg                                                                       <  1:684120‑M1/95‑1 (MQ=255)
                                                                        tggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATAACGGTTATGATTGGTGGTATTGAg                                                                       <  1:63870‑M1/95‑1 (MQ=255)
                                                                          gtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaaggTAGGATTGGGAGAAGGAGCAAAACTCAATGCATCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATCCCGGTTATGATTTGTGGTATTGAGCa                                                                     <  1:546792‑M1/97‑1 (MQ=255)
                                                                            gTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACATGGGATTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccacgccgccgacaggatgcgtggaatgcactggtgacgcct                                                                   >  1:167111‑M1/1‑66 (MQ=255)
                                                                             tttGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactacgccaacaggctggttgaattgcaatggtgccgcttt                                                                  >  1:613272‑M1/1‑65 (MQ=255)
                                                                              ttGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCa                                                                 <  1:697147/149‑1 (MQ=255)
                                                                               tGGCGATATCAAATCGGATGGCACTGTGCCAAACGCTCCCGCCACCGATCTCACGGTAGCAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAg                                                                <  1:273317/149‑1 (MQ=255)
                                                                                 gCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGTACGCACCGGTTTCATAGCTATAGCGGTGATGATTGGTGGTATTTAGAAATCAGTa                                                              >  1:164138/1‑149 (MQ=38)
                                                                                  cGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTaa                                                             <  1:405852/149‑1 (MQ=255)
                                                                                  cGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATAAGTaa                                                             >  2:747813/1‑149 (MQ=255)
                                                                                    atatCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgct                                                           <  1:432595‑M1/149‑92 (MQ=255)
                                                                                      atCAAGTCGGCTGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGGTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCAt                                                         <  2:336786/149‑1 (MQ=255)
                                                                                         aaaTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCa                                                      <  2:678583/149‑1 (MQ=255)
                                                                                          aaTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattaactgttggtgtcccggttccgtggccttcagccactcagccaacaggctggctgaaatccaatggtggcgctttttctgcttcacga                                                     >  2:154845‑M1/1‑52 (MQ=255)
                                                                                           aTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGt                                                    >  1:452949/1‑149 (MQ=255)
                                                                                                  gcttgatatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACCTTAGGACCCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCGGTCATCATTCCgtgtggggg                                             <  2:309888‑M1/121‑3 (MQ=255)
                                                                                                    cACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGa                                           >  1:458200/1‑149 (MQ=255)
                                                                                                     tgttattgcttcatttgcacaaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCCGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTCGCCCCGACCATCAATCAGTAATCATTCAGTGGGGGTGGaa                                          >  2:812905‑M1/26‑149 (MQ=255)
                                                                                                      gttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGTGCAATGAGTAATCGTTCAGTGGGGGTGGAAt                                         <  1:303177‑M1/125‑1 (MQ=255)
                                                                                                      gttatttcttcagtttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAAt                                         >  1:595865‑M1/25‑149 (MQ=255)
                                                                                                       ttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGAAACGGCTACATTAGGACGCATCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATg                                        >  1:50447‑M1/24‑149 (MQ=255)
                                                                                                       tgtgCAAACGGCTCTCGAAACCCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccaccccgcccccctgcttgctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactgg                                        <  1:795107‑M1/149‑111 (MQ=255)
                                                                                                        tatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTGTGATTGGTGGTATTGCGCAATCAGTAATCTTTCAGTGGGTGTGGAATGc                                       <  1:704614‑M1/127‑1 (MQ=255)
                                                                                                         atttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGcc                                      <  1:426227‑M1/128‑1 (MQ=255)
                                                                                                         atttcgtcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGcc                                      >  1:133868‑M1/22‑149 (MQ=255)
                                                                                                                  ttttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCATCGGTTTCATAGCTATACCGGTTATGATGGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCa                             <  1:792128‑M1/137‑1 (MQ=255)
                                                                                                                      gagaatccttggttTGGGAGAAGGctctggattacctgttggtgtcccggttccgtggccttcagcgactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatgcccggaactggcaaaggcttatccga                         <  2:218294‑M1/143‑126 (MQ=255)
                                                                                                                       gAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgac                        <  2:458350‑M1/149‑127 (MQ=255)
                                                                                                                         aaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCct                      <  1:487536‑M1/144‑1 (MQ=255)
                                                                                                                             gttGGCTTGGGAGGAGTGGCAAATGTTAATGCAGCAATGGCTACATTAGGACTCACCGGTTTCTTAGATTTACCGGGTATGTTGGGGGGTATTGAGCAATCAGGAATCATTCAGTGGGGGTGGAGTGCCGCAAAAGCATCTGCCTTTgg                  <  2:24866/148‑1 (MQ=255)
                                                                                                                             cTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggccaaggcttatccgacaaataa                  >  2:22765‑M1/1‑17 (MQ=255)
                                                                                                                             cTTGGTTTGGGACAGGTcgcggcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttaaccgacaaataa                  >  2:518928‑M1/1‑17 (MQ=255)
                                                                                                                                  tttGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgccaagtaaattgc             >  1:63719‑M1/1‑12 (MQ=255)
                                                                                                                                  tttGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgc             >  1:485458‑M1/1‑12 (MQ=255)
                                                                                                                                  TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCACTCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTggggggg             <  1:577542‑M1/149‑1 (MQ=255)
                                                                                                                                  TTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCCAAAGCATCTGCCTCTggggggg             <  1:703862‑M1/149‑1 (MQ=255)
                                                                                                                                      ggAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctga         >  1:786318‑M1/1‑8 (MQ=255)
                                                                                                                                      GGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATgg         <  1:442500‑M1/149‑1 (MQ=255)
                                                                                                                                         gaAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagcatacccggaactggcaaaggcttatccgacaaataaattgcctgattt      >  2:362056‑M1/1‑5 (MQ=255)
                                                                                                                                         GAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGAGGGGTGgaac      <  2:712831‑M1/149‑2 (MQ=255)
                                                                                                                                           AGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATACGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATa    <  1:420463‑M1/149‑1 (MQ=255)
                                                                                                                                             gctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgt  >  1:315725‑M1/1‑1 (MQ=255)
                                                                                                                                             gctctgcattacctggtggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgt  <  2:764913‑M1/149‑149 (MQ=255)
                                                                                                                                             GAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACa  <  1:462152‑M1/149‑1 (MQ=255)
                                                                                                                                             |                                                                                                                                                    
GTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACA  >  NC_000913_3_hsa_tpiA/1207664‑1207953

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.