New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3779138110 (1.510)7 (0.100) 6/278 6.9 6.2% coding (85/777 nt) lldR dual role activator/repressor for lldPRD operon
?NC_000913 = 3779144 107 (1.550)coding (91/777 nt) lldR dual role activator/repressor for lldPRD operon
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 111 total aligned reads displayed.

TCACCTGTATAGTGGGCGTGATCACCACGCTTCAGGCTTATGTCTTAACGTGGATGATTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGTGCTGCTCAGTCGACGCGGCGGCGGGACGTTTATTCGCTGGCGTCATGAC  >  NC_000913/3778990‑3779281
                                                                                                                                                    |                                                                                                                                               
tCACCTGTATAGTGGGCGTGATCACCACGCTTCAGGCTTATGTCTTAACGTGGATGATTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGCGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCa                                                                                                                                                 >  1:963359/1‑149 (MQ=255)
     ggTATAGTGGGCGAGATCACCTCGCTTCAGGCTTATGTCTTAACGTGGATGATTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCTTGAAg                                                                                                                                            <  2:738403/148‑1 (MQ=255)
       tataGTGGGCGTGATCACCACGCTTCAGGCTTATGTCTTAACGTGGAGGATTCCTTAATGATTGTTTTACCCAGCCGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAACCCTGGAAGCGGGCATGAAGtt                                                                                                                                          >  1:603896/1‑149 (MQ=255)
          aGTGGGCGTGATCACCACGCTTCAGGCTTATGTCTTAACGTGGATGATTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGcc                                                                                                                                       >  1:1037299/1‑149 (MQ=255)
          aGTGGGCGTGATCACCACGCTTCAGGCTTATGTCTTAACGTGGATGATTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGcc                                                                                                                                       >  1:842756/1‑149 (MQ=255)
             gggCGTGATCACCACGCTTCAGGCTTATGTCTTAACGTGGATGATTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGc                                                                                                                                    >  1:434727/1‑149 (MQ=255)
              ggCGTGATCTCCACGCTTCAGGCGTATGTCTTCACGTGGATGAGTCCTTTATGATGGTTTTCCCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCt                                                                                                                                   <  1:993546/149‑1 (MQ=255)
                cGTGATCACCACGCTTCAGGCTTATGTCTTAACGTGGATGATTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGa                                                                                                                                 <  2:1063612/149‑1 (MQ=255)
                 gTGATCACCACGCTTCAGGCTTATGTCTTAACGTGGATGATTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAg                                                                                                                                >  1:581308/1‑149 (MQ=255)
                 gTGATCACCACGCTTCAGGCTTATGTCTTAACGTGGATGATTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAg                                                                                                                                >  2:11794/1‑149 (MQ=255)
                  tGATCACCACGCTTCAGGCTTATGTCATCACGTGGCTGATTCCTTAATGATTGTTTTCCCCAGACGCCTGTCAGACGAGGTGGCCGATCGGGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAgc                                                                                                                               <  1:381760/149‑1 (MQ=255)
                   gATCACCACGCTTCAGGCTTATGTCTTAACGTGGATGATTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAACCGGGCATGAAGTTGCCCGCTGAgcg                                                                                                                              >  1:665872/1‑149 (MQ=255)
                       accacGCTTCAGGCTTATGTCTTAACGTGGATGATTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGATGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCaa                                                                                                                          <  2:791376/149‑1 (MQ=255)
                        ccccGCTGCAGGCTTATGTCTTAACGTGGAGGATTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAAc                                                                                                                         <  1:193824/146‑1 (MQ=255)
                           cGCTTCAGGCTTATGTCTTAACGTGGATGATTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTgg                                                                                                                      <  2:648536/149‑1 (MQ=255)
                           cGCTGCAGGCTTATGTCTTAACGCGGATTACTCCTTCATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGAACGTGTCCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTgg                                                                                                                      <  1:1078120/149‑1 (MQ=255)
                              ttCAGGCATAGTGCTTAACGTGGAGGATTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGGTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACGTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGa                                                                                                                   <  1:575152/149‑1 (MQ=255)
                               tCAGGCTTATGTCTTAACGTGGATGATTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGAt                                                                                                                  <  1:646951/149‑1 (MQ=255)
                                 cggCTTATGTCTTAACGTGGATGATTCCTTACTGATGGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGc                                                                                                                <  1:897033/148‑1 (MQ=255)
                                 aGGCTTATGTCTTAACGTGGATGATTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGc                                                                                                                <  1:729552/149‑1 (MQ=255)
                                     ttATGTCTTAACGTGGATGATTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGa                                                                                                                   >  1:1151892/1‑142 (MQ=255)
                                     ttATGTCTTAACGTGGATGATTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGa                                                                                                                   <  2:1151892/142‑1 (MQ=255)
                                       aTGTCTTAACGCGGATGATGCCTTAATGATTGTTATACCCACACCCCTGTCAGACGAGGGTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCg                                                                                                          <  1:190085/149‑1 (MQ=255)
                                       aTGGCTTAACGTGGATGAATCCTAAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGGGGCCGAGCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCAGGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCg                                                                                                          <  1:136539/149‑1 (MQ=255)
                                         gtctacaCGTCGAAGATCCCTAAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGAGCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGACGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGc                                                                                                        <  1:56426/143‑1 (MQ=255)
                                            ttAACGTGGATGATTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTa                                                                                                     >  1:911892/1‑149 (MQ=255)
                                            ttAACGGGGATGATTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTa                                                                                                     <  2:978141/149‑1 (MQ=255)
                                              accggggaggaTTCCTTAATGTTTGTTTTACCCAGACGCCTGGCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATc                                                                                                   <  1:208254/144‑1 (MQ=255)
                                              aaCGTGGATGATTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACTAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATc                                                                                                   >  2:727655/1‑149 (MQ=255)
                                              aaCGTGGATGATTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATc                                                                                                   <  2:340379/149‑1 (MQ=255)
                                               aCGTGGATGATTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAATACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCa                                                                                                  <  2:335690/149‑1 (MQ=255)
                                               aCGTGGAAGAATCCTTAATGATTGGTTTACCCAGCCCCCGGGCCGACCCGGTTGCCGCTCGGGGGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCa                                                                                                  <  1:263348/149‑1 (MQ=255)
                                                  tGGATGATTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGt                                                                                               >  2:284399/1‑149 (MQ=255)
                                                    gatgatTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTaa                                                                                             >  2:648737/1‑149 (MQ=255)
                                                    gatgatTCCTTAATGATTGTTTGACCCAGACGCCGGGCCGACGCGGGGGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTaa                                                                                             <  1:622726/149‑1 (MQ=255)
                                                      tgatTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCAGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATCCAACTCGGCGTATCACGAAAtt                                                                                           >  2:105187/1‑149 (MQ=255)
                                                        atTCCTTAATGATTGTTTTACCCAGCCGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGTTGAAATAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCa                                                                                         >  2:959564/1‑149 (MQ=255)
                                                        atTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGGTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCa                                                                                         <  1:534795/149‑1 (MQ=255)
                                                          tCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGc                                                                                                        >  1:544497/1‑132 (MQ=255)
                                                          tCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGc                                                                                                        <  2:544497/132‑1 (MQ=255)
                                                          tCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACt                                                                                       <  2:155812/149‑1 (MQ=255)
                                                              tAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAACACCTGGAAGCGGGCATGAAGATGCCCGCTGAGCGCCAACTGGCGCTGCAACTCGGCGTATCACGTAATTCACTgcgc                                                                                   >  1:732345/1‑149 (MQ=255)
                                                               aaTGATTGTTATACCCAGACGCCTGTCAGACGCGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAAACTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTAGGATTATCACGTAATTCACTgcccc                                                                                  >  1:663927/1‑146 (MQ=255)
                                                                 tGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAg                                                                                <  2:750262/149‑1 (MQ=255)
                                                                   aTTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCACCTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGCGgc                                                                              >  1:596649/1‑149 (MQ=255)
                                                                   aTTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGgc                                                                              <  1:1113386/149‑1 (MQ=255)
                                                                       gtttCCCCAGACGCCTGTCAGTCTAGGTTGCCGATCGTGGGCGGGCGCTGATTGATGAAAAAAACCTGGTCGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGAGGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTg                                                                          <  2:349505/148‑1 (MQ=255)
                                                                        tttACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTgg                                                                         >  1:706960/1‑149 (MQ=255)
                                                                            cccAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCaaa                                                                     <  1:748777/149‑1 (MQ=255)
                                                                              ccgACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGGTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAAc                                                                   <  1:77589/147‑1 (MQ=255)
                                                                               aGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACt                                                                  >  1:920004/1‑149 (MQ=255)
                                                                                 ccGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTgg                                                                <  2:131330/148‑1 (MQ=255)
                                                                                  cGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGgt                                                               <  2:335251/149‑1 (MQ=255)
                                                                                    ccTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGgtga                                                             >  1:1000660/1‑149 (MQ=255)
                                                                                    ccTGGCAGACGAGGGTGCCGATCGGGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCAGGAAGTTGCCCGCGGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGgtga                                                             <  2:536202/149‑1 (MQ=255)
                                                                                     cTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGgtgag                                                            >  1:774857/1‑149 (MQ=255)
                                                                                     cTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGgtgag                                                            >  2:76320/1‑149 (MQ=255)
                                                                                      tGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAACACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGgtgagt                                                           >  2:80717/1‑149 (MQ=255)
                                                                                      tGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGgtgagt                                                           >  2:300484/1‑149 (MQ=255)
                                                                                       gTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCaaaa                                                                    >  1:95345/1‑139 (MQ=255)
                                                                                       gTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCaaaa                                                                    <  2:95345/139‑1 (MQ=255)
                                                                                       gTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCTAAGCTGgtgagtg                                                          >  1:455068/1‑149 (MQ=255)
                                                                                       gTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGgtgagtg                                                          >  2:25182/1‑149 (MQ=255)
                                                                                        tCAGCCGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCAATCTGGCGATGCAACTCGGCGTATCACGTAAGTCACTGCGCGAGGCGCTGGAAAAACGGgtgagtga                                                         >  1:810512/1‑149 (MQ=255)
                                                                                          aGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAg                                                       >  2:846227/1‑149 (MQ=255)
                                                                                          aGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAg                                                       >  1:507950/1‑149 (MQ=255)
                                                                                            aCGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGATGCGCTGGCAAAACTGGTGAGTGAAGGc                                                     >  1:1120447/1‑149 (MQ=255)
                                                                                            aCGAGGCTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGc                                                     <  2:209593/149‑1 (MQ=255)
                                                                                               cggTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGtg                                                  <  1:965071/148‑1 (MQ=255)
                                                                                               aGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGtg                                                  >  1:865406/1‑149 (MQ=255)
                                                                                                ggTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGtgc                                                 <  1:761943/149‑1 (MQ=255)
                                                                                                ggTTGCCGAGCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGtgc                                                 <  1:1141084/149‑1 (MQ=255)
                                                                                                 gTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGtgct                                                >  1:593917/1‑149 (MQ=255)
                                                                                                 gTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGtgct                                                <  1:25182/149‑1 (MQ=255)
                                                                                                    gCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGTgctgct                                             <  1:978179/149‑1 (MQ=255)
                                                                                                      ggATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGTGCTGCTCa                                           <  1:727655/148‑1 (MQ=255)
                                                                                                        aTCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGTGCTGCTCAGt                                         >  2:960229/1‑149 (MQ=255)
                                                                                                        aTCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGTGCTGCTCAGt                                         >  1:275762/1‑149 (MQ=255)
                                                                                                        aTCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGAGCTGCTCAGt                                         >  2:670154/1‑149 (MQ=255)
                                                                                                                  ggCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGAGCTGGCAAAACTGGTGAGTGAAGGCGTGCTGCTCAGTCGACgcggcg                               >  1:208093/1‑149 (MQ=255)
                                                                                                                    cgcTGATTGATGAAAAAAACCTGGAATCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGCGGCTCTGGCAAAACTGGTGAGTGAAGGCGTGCTGCTCAGTCGACgcggcggc                             >  1:484424/1‑149 (MQ=255)
                                                                                                                     gcTGATTGATGAAAAAAACCTGGACGCGGGCATGAAGGTGCCCGCTGAGCGCCAACTGGCGAGGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGGGCTGCTCAGTCGACgcggcggcg                            <  1:738057/149‑1 (MQ=255)
                                                                                                                      cTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGTGCTGCTCAGTCGACGcggcggcgg                           <  1:839496/149‑1 (MQ=255)
                                                                                                                       tgattgatGAAAAAAACCTTGAAGCGTGCTTGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGAAATTCACTGCGCGAGGCGCTGGCAAAACTGGTTAGTGAAGGCGTGCTGCTCAGTCGACGCGGCGGCggg                          <  2:663927/149‑1 (MQ=255)
                                                                                                                         attgatGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGTGCTGCTCAGTCGACGCGGCGGCGGGAc                        <  1:960229/149‑1 (MQ=255)
                                                                                                                         attgatGAAAAAAACCTGGAAGCGGGCATGAAGGGGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGTGCTGCTCAGTCGACGCGGCGGCGGGAc                        <  2:771136/149‑1 (MQ=255)
                                                                                                                           tgatgaAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGTGCTGCTCAGTCGACGCGGCGGCGGGACGt                      >  2:198133/1‑149 (MQ=255)
                                                                                                                           tgatgaAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACATAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGTGCTGCTCAGTCGACGCGGCGGCGGGACGt                      <  1:1132876/149‑1 (MQ=255)
                                                                                                                               gaAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGTGCTGCTCAGTCGACGCGGCGGCGGGACGTTTAt                  >  1:1132801/1‑149 (MQ=255)
                                                                                                                               gaAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTCGAGATGCAACTCCGCGTATCACGTAATACACTGCGCGAGGCGCTGGCAAAACTGGGGAGTGAAGGCGTGCTGCTCTGTCGACGCGGCGGCGGGACGTTTAt                  >  2:126649/1‑149 (MQ=255)
                                                                                                                                aaaaaaaCCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGTGCTGCTCAGTCGACGCGGCGGCGGGACGTTTAtt                 >  1:439259/1‑149 (MQ=255)
                                                                                                                                 aaaaaaCCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAACACTGGTGAGTGAAGGCGTGCTGCTCAGTCGACGCGGAGGCGGGACGTTTATTc                >  2:498133/1‑149 (MQ=255)
                                                                                                                                   aaaaCCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGGGAAGGCGTGCTGCTCAGTCGACGCGGCGGCGGGACGTTTATTCGc              <  2:963359/149‑1 (MQ=255)
                                                                                                                                     aaCCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGTGCTGCTCAGTCGACGCGGCGGCGGGACGTTTATTCGCTg            <  1:11794/149‑1 (MQ=255)
                                                                                                                                            aaGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGTGCTGCTCAGTCGACGCGGCGGCGGGACGTTTATTCGCTGGCGTCAt     >  2:840388/1‑149 (MQ=255)
                                                                                                                                              gCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCTCGTAATTCTCTGCGCGAGGCGCTGGCAAATCTGGTGATTTAAGGCGTGCTGCTCATTCGACGCGGCGGCGGGACGTTTATTCGCTGGCGTCATGa   <  1:103896/149‑1 (MQ=255)
                                                                                                                                              gCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGTGCTGCTCAGTCGACGCGGCGGCGGGACGTTTATTCGCTGGCGTCATGa   >  1:699863/1‑149 (MQ=255)
                                                                                                                                               cGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGTGCTGCTCAGTCGACGCGGCGGCGGGACGTTTATTCGCTGGCGTCATGac  <  2:842756/149‑1 (MQ=255)
                                                                                                                                               cGGGCATGAAGTGGCCCGCTGAGCGCCAACGGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCTCTGGCAAAACTGGTGAGTTCAGGCGTGCTGCTCAGTCGACGCGGCGGCGGGACGTTTATTCGCTGGCGTCATGac  <  1:749626/149‑1 (MQ=255)
                                                                                                                                               cGGGCATGAAGGTGCCCGCGGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGTGCTGCTCAGTCGACGCGGCGGCGGGACGTTTATTCGCTGGCGTCATGac  <  2:948021/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                               
TCACCTGTATAGTGGGCGTGATCACCACGCTTCAGGCTTATGTCTTAACGTGGATGATTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGTGCTGCTCAGTCGACGCGGCGGCGGGACGTTTATTCGCTGGCGTCATGAC  >  NC_000913/3778990‑3779281

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.