New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3779138110 (1.510)7 (0.100) 6/278 6.9 6.2% coding (85/777 nt) lldR dual role activator/repressor for lldPRD operon
?NC_000913 = 3779144 107 (1.550)coding (91/777 nt) lldR dual role activator/repressor for lldPRD operon
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 112 total aligned reads displayed.

TATAGTGGGCGTGATCACCACGCTTCAGGCTTATGTCTTAACGTGGATGATTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGTGCTGCTCAGTCGACGCGGCGGCGGGACGTTTATTCGCTGGCGTCATGACACATGGTCGGA  >  NC_000913/3778997‑3779292
                                                                                                                                                   |                                                                                                                                                    
   aGTGGGCGTGATCACCACGCTTCAGGCTTATGTCTTAACGTGGATGATTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGcc                                                                                                                                                  >  1:842756/1‑149 (MQ=255)
   aGTGGGCGTGATCACCACGCTTCAGGCTTATGTCTTAACGTGGATGATTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGcc                                                                                                                                                  >  1:1037299/1‑149 (MQ=255)
      gggCGTGATCACCACGCTTCAGGCTTATGTCTTAACGTGGATGATTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGc                                                                                                                                               >  1:434727/1‑149 (MQ=255)
       ggCGTGATCTCCACGCTTCAGGCGTATGTCTTCACGTGGATGAGTCCTTTATGATGGTTTTCCCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCt                                                                                                                                              <  1:993546/149‑1 (MQ=255)
         cGTGATCACCACGCTTCAGGCTTATGTCTTAACGTGGATGATTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGa                                                                                                                                            <  2:1063612/149‑1 (MQ=255)
          gTGATCACCACGCTTCAGGCTTATGTCTTAACGTGGATGATTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAg                                                                                                                                           >  2:11794/1‑149 (MQ=255)
          gTGATCACCACGCTTCAGGCTTATGTCTTAACGTGGATGATTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAg                                                                                                                                           >  1:581308/1‑149 (MQ=255)
           tGATCACCACGCTTCAGGCTTATGTCATCACGTGGCTGATTCCTTAATGATTGTTTTCCCCAGACGCCTGTCAGACGAGGTGGCCGATCGGGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAgc                                                                                                                                          <  1:381760/149‑1 (MQ=255)
            gATCACCACGCTTCAGGCTTATGTCTTAACGTGGATGATTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAACCGGGCATGAAGTTGCCCGCTGAgcg                                                                                                                                         >  1:665872/1‑149 (MQ=255)
                accacGCTTCAGGCTTATGTCTTAACGTGGATGATTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGATGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCaa                                                                                                                                     <  2:791376/149‑1 (MQ=255)
                 ccccGCTGCAGGCTTATGTCTTAACGTGGAGGATTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAAc                                                                                                                                    <  1:193824/146‑1 (MQ=255)
                    cGCTTCAGGCTTATGTCTTAACGTGGATGATTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTgg                                                                                                                                 <  2:648536/149‑1 (MQ=255)
                    cGCTGCAGGCTTATGTCTTAACGCGGATTACTCCTTCATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGAACGTGTCCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTgg                                                                                                                                 <  1:1078120/149‑1 (MQ=255)
                       ttCAGGCATAGTGCTTAACGTGGAGGATTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGGTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACGTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGa                                                                                                                              <  1:575152/149‑1 (MQ=255)
                        tCAGGCTTATGTCTTAACGTGGATGATTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGAt                                                                                                                             <  1:646951/149‑1 (MQ=255)
                         cAGGCTTATGTCTTAACGTGGATGATTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATg                                                                                                                            <  2:333665/149‑1 (MQ=255)
                          cggCTTATGTCTTAACGTGGATGATTCCTTACTGATGGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGc                                                                                                                           <  1:897033/148‑1 (MQ=255)
                          aGGCTTATGTCTTAACGTGGATGATTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGc                                                                                                                           <  1:729552/149‑1 (MQ=255)
                              ttATGTCTTAACGTGGATGATTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGa                                                                                                                              >  1:1151892/1‑142 (MQ=255)
                              ttATGTCTTAACGTGGATGATTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGa                                                                                                                              <  2:1151892/142‑1 (MQ=255)
                                aTGTCTTAACGCGGATGATGCCTTAATGATTGTTATACCCACACCCCTGTCAGACGAGGGTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCg                                                                                                                     <  1:190085/149‑1 (MQ=255)
                                aTGGCTTAACGTGGATGAATCCTAAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGGGGCCGAGCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCAGGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCg                                                                                                                     <  1:136539/149‑1 (MQ=255)
                                  gtctacaCGTCGAAGATCCCTAAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGAGCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGACGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGc                                                                                                                   <  1:56426/143‑1 (MQ=255)
                                     ttAACGTGGATGATTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTa                                                                                                                >  1:911892/1‑149 (MQ=255)
                                     ttAACGGGGATGATTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTa                                                                                                                <  2:978141/149‑1 (MQ=255)
                                       aaCGTGGATGATTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACTAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATc                                                                                                              >  2:727655/1‑149 (MQ=255)
                                       aaCGTGGATGATTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATc                                                                                                              <  2:340379/149‑1 (MQ=255)
                                        aCGTGGAAGAATCCTTAATGATTGGTTTACCCAGCCCCCGGGCCGACCCGGTTGCCGCTCGGGGGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCa                                                                                                             <  1:263348/149‑1 (MQ=255)
                                           tGGATGATTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGt                                                                                                          >  2:284399/1‑149 (MQ=255)
                                             gatgatTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTaa                                                                                                        >  2:648737/1‑149 (MQ=255)
                                             gatgatTCCTTAATGATTGTTTGACCCAGACGCCGGGCCGACGCGGGGGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTaa                                                                                                        <  1:622726/149‑1 (MQ=255)
                                               tgatTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCAGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATCCAACTCGGCGTATCACGAAAtt                                                                                                      >  2:105187/1‑149 (MQ=255)
                                                 atTCCTTAATGATTGTTTTACCCAGCCGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGTTGAAATAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCa                                                                                                    >  2:959564/1‑149 (MQ=255)
                                                 atTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGGTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCa                                                                                                    <  1:534795/149‑1 (MQ=255)
                                                   tCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGc                                                                                                                   <  2:544497/132‑1 (MQ=255)
                                                   tCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGc                                                                                                                   >  1:544497/1‑132 (MQ=255)
                                                   tCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACt                                                                                                  <  2:155812/149‑1 (MQ=255)
                                                        aaTGATTGTTATACCCAGACGCCTGTCAGACGCGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAAACTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTAGGATTATCACGTAATTCACTgcccc                                                                                             >  1:663927/1‑146 (MQ=255)
                                                          tGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAg                                                                                           <  2:750262/149‑1 (MQ=255)
                                                            aTTGTTTTACCCAGACGCCTGTCAGACGTGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAACAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGgc                                                                                         <  2:808769/149‑1 (MQ=255)
                                                            aTTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCACCTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGCGgc                                                                                         >  1:596649/1‑149 (MQ=255)
                                                            aTTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGgc                                                                                         <  1:1113386/149‑1 (MQ=255)
                                                                gtttCCCCAGACGCCTGTCAGTCTAGGTTGCCGATCGTGGGCGGGCGCTGATTGATGAAAAAAACCTGGTCGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGAGGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTg                                                                                     <  2:349505/148‑1 (MQ=255)
                                                                 tttACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTgg                                                                                    >  1:706960/1‑149 (MQ=255)
                                                                     cccAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCaaa                                                                                <  1:748777/149‑1 (MQ=255)
                                                                       ccgACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGGTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAAc                                                                              <  1:77589/147‑1 (MQ=255)
                                                                        aGACGCCTGTCAGCCGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGACGTGGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACt                                                                             <  1:276079/149‑1 (MQ=255)
                                                                        aGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACt                                                                             >  1:920004/1‑149 (MQ=255)
                                                                           cGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGgt                                                                          <  2:335251/149‑1 (MQ=255)
                                                                             ccTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGgtga                                                                        >  1:1000660/1‑149 (MQ=255)
                                                                             ccTGTCAGACGAGGGTGCCGATCGTGGGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGgtga                                                                        <  1:116720/149‑1 (MQ=255)
                                                                             ccTGGCAGACGAGGGTGCCGATCGGGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCAGGAAGTTGCCCGCGGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGgtga                                                                        <  2:536202/149‑1 (MQ=255)
                                                                              cTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGgtgag                                                                       >  2:76320/1‑149 (MQ=255)
                                                                              cTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGgtgag                                                                       >  1:774857/1‑149 (MQ=255)
                                                                               tGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAACACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGgtgagt                                                                      >  2:80717/1‑149 (MQ=255)
                                                                               tGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGgtgagt                                                                      >  2:300484/1‑149 (MQ=255)
                                                                                gTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCaaaa                                                                               <  2:95345/139‑1 (MQ=255)
                                                                                gTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCaaaa                                                                               >  1:95345/1‑139 (MQ=255)
                                                                                gTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCTAAGCTGgtgagtg                                                                     >  1:455068/1‑149 (MQ=255)
                                                                                gTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGgtgagtg                                                                     >  2:25182/1‑149 (MQ=255)
                                                                                 tCAGCCGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCAATCTGGCGATGCAACTCGGCGTATCACGTAAGTCACTGCGCGAGGCGCTGGAAAAACGGgtgagtga                                                                    >  1:810512/1‑149 (MQ=255)
                                                                                   aGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAg                                                                  >  1:507950/1‑149 (MQ=255)
                                                                                   aGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAg                                                                  >  2:846227/1‑149 (MQ=255)
                                                                                     aCGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGATGCGCTGGCAAAACTGGTGAGTGAAGGc                                                                >  1:1120447/1‑149 (MQ=255)
                                                                                     aCGAGGCTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGc                                                                <  2:209593/149‑1 (MQ=255)
                                                                                        cggTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGtg                                                             <  1:965071/148‑1 (MQ=255)
                                                                                        aGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGtg                                                             >  1:865406/1‑149 (MQ=255)
                                                                                         ggTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGtgc                                                            <  1:761943/149‑1 (MQ=255)
                                                                                          gTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGtgct                                                           <  1:25182/149‑1 (MQ=255)
                                                                                          gTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGtgct                                                           >  1:593917/1‑149 (MQ=255)
                                                                                               ggATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGTGCTGCTCa                                                      <  1:727655/148‑1 (MQ=255)
                                                                                                 aTCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGTGCTGCTCAGt                                                    >  2:960229/1‑149 (MQ=255)
                                                                                                 aTCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGTGCTGCTCAGt                                                    >  1:275762/1‑149 (MQ=255)
                                                                                                 aTCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGAGCTGCTCAGt                                                    >  2:670154/1‑149 (MQ=255)
                                                                                                    gtgtGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGTGCTGCTCAGTCgc                                                 >  2:1152459/1‑148 (MQ=255)
                                                                                                           ggCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGAGCTGGCAAAACTGGTGAGTGAAGGCGTGCTGCTCAGTCGACgcggcg                                          >  1:208093/1‑149 (MQ=255)
                                                                                                              gcTGATTGATGAAAAAAACCTGGACGCGGGCATGAAGGTGCCCGCTGAGCGCCAACTGGCGAGGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGGGCTGCTCAGTCGACgcggcggcg                                       <  1:738057/149‑1 (MQ=255)
                                                                                                                  attgatGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGTGCTGCTCAGTCGACGCGGCGGCGGGAc                                   <  1:960229/149‑1 (MQ=255)
                                                                                                                  attgatGAAAAAAACCTGGAAGCGGGCATGAAGGGGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGTGCTGCTCAGTCGACGCGGCGGCGGGAc                                   <  2:771136/149‑1 (MQ=255)
                                                                                                                    tgatgaAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGTGCTGCTCAGTCGACGCGGCGGCGGGACGt                                 >  2:198133/1‑149 (MQ=255)
                                                                                                                    tgatgaAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACATAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGTGCTGCTCAGTCGACGCGGCGGCGGGACGt                                 <  1:1132876/149‑1 (MQ=255)
                                                                                                                      atgaAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGTTCTGCTCAGTCGACGCGGCGGCGGGACGgtt                               >  2:651810/1‑149 (MQ=255)
                                                                                                                        gaAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGTGCTGCTCAGTCGACGCGGCGGCGGGACGTTTAt                             >  1:1132801/1‑149 (MQ=255)
                                                                                                                        gaAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTCGAGATGCAACTCCGCGTATCACGTAATACACTGCGCGAGGCGCTGGCAAAACTGGGGAGTGAAGGCGTGCTGCTCTGTCGACGCGGCGGCGGGACGTTTAt                             >  2:126649/1‑149 (MQ=255)
                                                                                                                         aaaaaaaCCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGTGCTGCTCAGTCGACGCGGCGGCGGGACGTTTAtt                            >  1:439259/1‑149 (MQ=255)
                                                                                                                          aaaaaaCCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAACACTGGTGAGTGAAGGCGTGCTGCTCAGTCGACGCGGAGGCGGGACGTTTATTc                           >  2:498133/1‑149 (MQ=255)
                                                                                                                            aaaaCCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGGGAAGGCGTGCTGCTCAGTCGACGCGGCGGCGGGACGTTTATTCGc                         <  2:963359/149‑1 (MQ=255)
                                                                                                                              aaCCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGTGCTGCTCAGTCGACGCGGCGGCGGGACGTTTATTCGCTg                       <  1:11794/149‑1 (MQ=255)
                                                                                                                                  tGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGTGCTGCTCAGTCGACGCGGCGGCGGGACGTTTATTCGCTGGCGt                   >  1:92848/1‑149 (MQ=255)
                                                                                                                                       gCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCTCGTAATTCTCTGCGCGAGGCGCTGGCAAATCTGGTGATTTAAGGCGTGCTGCTCATTCGACGCGGCGGCGGGACGTTTATTCGCTGGCGTCATGa              <  1:103896/149‑1 (MQ=255)
                                                                                                                                       gCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGTGCTGCTCAGTCGACGCGGCGGCGGGACGTTTATTCGCTGGCGTCATGa              <  1:76320/149‑1 (MQ=255)
                                                                                                                                       gCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGTGCTGCTCAGTCGACGCGGCGGCGGGACGTTTATTCGCTGGCGTCATGa              >  1:699863/1‑149 (MQ=255)
                                                                                                                                        cGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGTGCTGCTCAGTCGACGCGGCGGCGGGACGTTTATTCGCTGGCGTCATGac             <  2:842756/149‑1 (MQ=255)
                                                                                                                                        cGGGCATGAAGTGGCCCGCTGAGCGCCAACGGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCTCTGGCAAAACTGGTGAGTTCAGGCGTGCTGCTCAGTCGACGCGGCGGCGGGACGTTTATTCGCTGGCGTCATGac             <  1:749626/149‑1 (MQ=255)
                                                                                                                                        cGGGCATGAAGGTGCCCGCGGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGTGCTGCTCAGTCGACGCGGCGGCGGGACGTTTATTCGCTGGCGTCATGac             <  2:948021/149‑1 (MQ=255)
                                                                                                                                               gAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGTGCTGCTCAGTCGACGCGGCGGCGGGACGTTTATTCGCTGGCGTCATGACACATGGt      >  1:1034739/1‑149 (MQ=255)
                                                                                                                                               gAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGTGCTGCTCAGTCGACGCGGCGGCGGGACGTTTATTCGCTGGCGTCATGACACATGGt      >  2:387012/1‑149 (MQ=255)
                                                                                                                                                 aGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGTGCTGCTCAGTCGACGCGGCGGCGGGACGTTTATTCGCTGGCGTCATGACACATGGTCg    <  1:1152459/149‑1 (MQ=255)
                                                                                                                                                  gTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGTGCTGCTCAGTCGACGCGGCGGCGGGACGTTTATTCGCTGGCGTCATGACACATGGTCgg   >  1:569605/1‑149 (MQ=255)
                                                                                                                                                   ttGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGTGCTGCTCAGTCGACGCGGCGGCGGGACGTTTATTCGCTGGCGTCATGACACATGGTCGGa  <  2:1037299/149‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
TATAGTGGGCGTGATCACCACGCTTCAGGCTTATGTCTTAACGTGGATGATTCCTTAATGATTGTTTTACCCAGACGCCTGTCAGACGAGGTTGCCGATCGTGTGCGGGCGCTGATTGATGAAAAAAACCTGGAAGCGGGCATGAAGTTGCCCGCTGAGCGCCAACTGGCGATGCAACTCGGCGTATCACGTAATTCACTGCGCGAGGCGCTGGCAAAACTGGTGAGTGAAGGCGTGCTGCTCAGTCGACGCGGCGGCGGGACGTTTATTCGCTGGCGTCATGACACATGGTCGGA  >  NC_000913/3778997‑3779292

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.