BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_pae_tpiA	= 715221	117 (0.860)	28 (0.230)	23/232	10.1	20.5%	intergenic (+23/‑191)	pgm/ybfP	phosphoglucomutase/lipoprotein
*	?	NC_000913_3_pae_tpiA	= 715231	110 (0.880)	28 (0.230)	23/232	10.1	20.5%	intergenic (+33/‑181)	pgm/ybfP	phosphoglucomutase/lipoprotein
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 119 total aligned reads displayed.

CCGTCAGGCACGGAAGACGCATATAAGATCTACTGCGAAAGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAAC  >  NC_000913_3_pae_tpiA/715079‑715370

      ggCACGGAAGACGCATATAAGATCTACTGCGAAAGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGc                                                                                                                                          >  4:537224/1‑150 (MQ=255)

              aGACGCATATAAGATCTACTGCGAAAGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCtttttt                                                                                                                                  <  1:1099977/150‑1 (MQ=255)

                  gCATATAAGATCTACTGCGAAAGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGt                                                                                                                              <  2:1027713/150‑1 (MQ=255)

                    atatAAGATCTACTGCGAAAGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTAt                                                                                                                            >  3:824989/1‑150 (MQ=255)

                     tataAGATCTACTGCGAAAGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATg                                                                                                                           >  2:1510265/1‑150 (MQ=255)

                       taAGATCTACTGCGAAAGCTTCCTCGGTGAAGGACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGAc                                                                                                                         >  1:1496649/1‑150 (MQ=255)

                       taAGATCTACTGCGAAAGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGAc                                                                                                                         <  4:753713/150‑1 (MQ=255)

                          gATCTACTGCGAAAGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTAt                                                                                                                            <  3:829572/144‑1 (MQ=255)

                          gATCTACTGCGAAAGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTAt                                                                                                                            >  4:829572/1‑144 (MQ=255)

                                 tGCGAAAGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGc                                                                                                                                          <  2:1062845/123‑1 (MQ=255)

                                 tGCGAAAGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGaa                                                                                                               >  2:1286219/1‑150 (MQ=255)

                                 tGCGAAAGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGaa                                                                                                               <  3:537224/150‑1 (MQ=255)

                                 tGCGAAAGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGGTCGGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGc                                                                                                                                          >  1:1062845/1‑123 (MQ=255)

                                    gAAAGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTa                                                                                                                                 >  4:133883/1‑129 (MQ=255)

                                    gAAAGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTa                                                                                                                                 <  3:133883/129‑1 (MQ=255)

                                    gAAAGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTg                                                                                                            >  2:909422/1‑150 (MQ=255)

                                     aaaGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACaaa                                                                                                                      <  1:986383/139‑1 (MQ=255)

                                     aaaGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACaaa                                                                                                                      >  2:986383/1‑139 (MQ=255)

                                     aaaGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGc                                                                                                           <  3:526888/150‑1 (MQ=255)

                                     aaaGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGc                                                                                                           <  2:346811/150‑1 (MQ=255)

                                       aGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCt                                                                                                         >  3:86192/1‑150 (MQ=255)

                                            ccTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATgc                                                                                                    <  4:806197/150‑1 (MQ=255)

                                            ccTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATgc                                                                                                    >  4:57240/1‑150 (MQ=255)

                                             cTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATgcg                                                                                                   >  4:23280/1‑150 (MQ=255)

                                               cGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGTTCGCCCTTTTTTACATATGACAAACACAGAATTGCCTGATGCGCt                                                                                                 >  1:1153522/1‑150 (MQ=255)

                                                    aagaaCATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCt                                                                                            >  3:319091/1‑150 (MQ=255)

                                                    aagaaCATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCt                                                                                            >  4:804597/1‑150 (MQ=255)

                                                      gaaCATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGc                                                                                                                                          <  1:910084/102‑1 (MQ=255)

                                                       aaCATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAACCGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTAt                                                                                         >  3:581974/1‑150 (MQ=255)

                                                        aCATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATc                                                                                        <  3:721115/150‑1 (MQ=255)

                                                         cATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGa                                                                                                                                              <  1:1317152/95‑1 (MQ=255)

                                                         cATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGa                                                                                                                                              >  2:1317152/1‑95 (MQ=255)

                                                         cATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCa                                                                                       <  4:386966/150‑1 (MQ=255)

                                                           tCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGa                                                                                                       <  3:588968/132‑1 (MQ=255)

                                                           tCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGa                                                                                                       >  4:588968/1‑132 (MQ=255)

                                                            cGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCTTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGc                                                                                    >  2:247940/1‑150 (MQ=255)

                                                              cAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCt                                                                                  >  2:690881/1‑150 (MQ=255)

                                                                aGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAACCGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTAc                                                                                <  4:581974/150‑1 (MQ=255)

                                                                   aGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAg                                                                             <  3:57240/150‑1 (MQ=255)

                                                                     aTTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGa                                                                           <  1:522827/150‑1 (MQ=255)

                                                                      ttGAGAGAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGAt                                                                          <  1:873715/150‑1 (MQ=255)

                                                                       tGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATg                                                                         >  2:376990/1‑150 (MQ=255)

                                                                       tGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATg                                                                         >  4:116942/1‑150 (MQ=255)

                                                                          gaaagaaGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCg                                                                                                                                                       <  2:526876/69‑1 (MQ=255)

                                                                          gaaagaaGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCg                                                                                                                                                       >  1:526876/1‑69 (MQ=255)

                                                                          gaaagaaGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTg                                                                      >  3:1005743/1‑150 (MQ=255)

                                                                              gaagCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGc                                                                                    >  2:909129/1‑132 (MQ=255)

                                                                              gaagCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAat                                                                  <  1:1510265/150‑1 (MQ=255)

                                                                               aagCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAata                                                                 <  1:863369/150‑1 (MQ=255)

                                                                                   ggTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATAtt                                                             <  3:745891/150‑1 (MQ=255)

                                                                                      tGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGaa                                                          >  3:573339/1‑150 (MQ=255)

                                                                                       gagaTTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAAt                                                         >  3:480937/1‑150 (MQ=255)

                                                                                       gagaTTGTGAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAAt                                                         <  2:1454480/150‑1 (MQ=255)

                                                                                         gaTTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGTCTACGAGGATGGTGCAATATATTGAAttt                                                       <  1:797005/150‑1 (MQ=255)

                                                                                          aTTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTa                                                      >  2:622646/1‑150 (MQ=255)

                                                                                          aTTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTa                                                      >  3:489523/1‑150 (MQ=255)

                                                                                           ttGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTAc                                                                                                                                <  4:469003/75‑1 (MQ=255)

                                                                                           ttGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTAc                                                                                                                                >  3:469003/1‑75 (MQ=255)

                                                                                                aGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAAAGAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCg                                                  >  4:57130/1‑150 (MQ=255)

                                                                                                aGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGAt                                                >  1:7323/1‑150 (MQ=255)

                                                                                                aGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGAt                                                >  1:693728/1‑150 (MQ=255)

                                                                                                  cGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGAttt                                              >  1:312335/1‑150 (MQ=255)

                                                                                                    aaGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGa                                                                                                                          <  2:1294341/72‑1 (MQ=255)

                                                                                                    aaGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGa                                                                                                                          >  1:1294341/1‑72 (MQ=255)

                                                                                                    aaGTTCTGAAAAACGCGTAAACACATTTAAGAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTg                                            <  4:406389/150‑1 (MQ=255)

                                                                                                      gTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTa                                          <  4:1005743/150‑1 (MQ=255)

                                                                                                       ttCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAg                                         >  2:1336000/1‑150 (MQ=255)

                                                                                                          tGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCtttt                                                                                                                                    <  1:907652/56‑1 (MQ=255)

                                                                                                          tGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCtttt                                                                                                                                    >  2:907652/1‑56 (MQ=255)

                                                                                                          tGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGcc                                      <  1:1110311/150‑1 (MQ=255)

                                                                                                              aaaCGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGAt                                  >  3:954523/1‑150 (MQ=255)

                                                                                                                 cgggTAACCACATTAAAAAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGNAATATATTGAATNTAAGCGATTTTGTAGGCCGGATAAg                               <  1:1093961/147‑1 (MQ=255)

                                                                                                                 cgcgTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAg                               <  2:268297/150‑1 (MQ=255)

                                                                                                                    gTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGc                                                                                    <  2:541533/94‑1 (MQ=255)

                                                                                                                    gTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGc                                                                                    >  1:541533/1‑94 (MQ=255)

                                                                                                                    gTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCg                            <  4:319091/150‑1 (MQ=255)

                                                                                                                    gTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGACGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCg                            >  3:150425/1‑150 (MQ=255)

                                                                                                                      aaaCACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGtt                          >  2:878133/1‑150 (MQ=255)

                                                                                                                      aaaCACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGtt                          <  2:398642/150‑1 (MQ=255)

                                                                                                                        acacATTTAATGAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAg                                                                                      >  2:769746/1‑88 (MQ=255)

                                                                                                                        acacATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGcc                                                                                                          >  1:402290/1‑68 (MQ=255)

                                                                                                                        acacATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGcc                                                                                                          <  2:402290/68‑1 (MQ=255)

                                                                                                                        acacATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATc                                                                                        >  4:483062/1‑86 (MQ=255)

                                                                                                                        acacATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATc                                                                                        <  3:483062/86‑1 (MQ=255)

                                                                                                                        acacATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCa                        >  2:683707/1‑150 (MQ=255)

                                                                                                                          acaTTTAATACAAAA‑‑AGGGCGGTCGCAAGAGCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAATCGATTTTGTAGGCCTGATAAGGCGTTCAcg                      >  2:456452/1‑150 (MQ=255)

                                                                                                                            aTTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCAcgcc                    >  2:1575242/1‑150 (MQ=255)

                                                                                                                              ttAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCAcgccgc                  >  1:851233/1‑150 (MQ=255)

                                                                                                                                aataaAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGcc                                      >  1:511392/1‑128 (MQ=255)

                                                                                                                                  taaAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGAt                                                                                                      >  2:200839/1‑62 (MQ=255)

                                                                                                                                  taaAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGAt                                                                                                      <  1:200839/62‑1 (MQ=255)

                                                                                                                                   aaaaaa‑‑aGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCg             >  1:1309375/1‑150 (MQ=255)

                                                                                                                                    aaaaa‑‑aGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGcc                                                                                                          <  1:939227/56‑1 (MQ=255)

                                                                                                                                    aaaaa‑‑aGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGcc                                                                                                          >  2:939227/1‑56 (MQ=255)

                                                                                                                                        a‑‑aGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGACGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCaaa        <  4:150425/150‑1 (MQ=255)

                                                                                                                                            gggCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTACGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCaaaaa      <  1:1278574/150‑1 (MQ=255)

                                                                                                                                            gggCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCaaaaa      <  1:1157179/150‑1 (MQ=255)

                                                                                                                                               cGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAaacaa   >  2:1335759/1‑150 (MQ=255)

                                                                                                                                                ggTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAaacaac  <  1:1218692/150‑1 (MQ=255)

                                                                                                                                                ggTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAaacaac  <  4:86192/150‑1 (MQ=255)

CCGTCAGGCACGGAAGACGCATATAAGATCTACTGCGAAAGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAAC  >  NC_000913_3_pae_tpiA/715079‑715370

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.