New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_pae_tpiA = 715221117 (0.860)28 (0.230) 23/232 10.1 20.5% intergenic (+23/‑191) pgm/ybfP phosphoglucomutase/lipoprotein
?NC_000913_3_pae_tpiA = 715231 110 (0.880)intergenic (+33/‑181) pgm/ybfP phosphoglucomutase/lipoprotein
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 120 total aligned reads displayed.

TCAGGCACGGAAGACGCATATAAGATCTACTGCGAAAGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACT  >  NC_000913_3_pae_tpiA/715082‑715377
                                                                                                                                                       |                                                                                                                                                  
tcAGGCACGGAAGACGCATATAAGATCTACTGCGAAAGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGAt                                                                                                                                                    >  3:532438/1‑150 (MQ=255)
    gCACGGAAGACGCATATAAGATCTACTGCGAAAGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGcc                                                                                                                                                <  3:862834/150‑1 (MQ=255)
           aGACGCATATAAGATCTACTGCGAAAGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCtttttt                                                                                                                                         <  1:1099977/150‑1 (MQ=255)
               gCATATAAGATCTACTGCGAAAGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGt                                                                                                                                     <  2:1027713/150‑1 (MQ=255)
                  tataAGATCTACTGCGAAAGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATg                                                                                                                                  >  2:1510265/1‑150 (MQ=255)
                    taAGATCTACTGCGAAAGCTTCCTCGGTGAAGGACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGAc                                                                                                                                >  1:1496649/1‑150 (MQ=255)
                    taAGATCTACTGCGAAAGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGAc                                                                                                                                <  4:753713/150‑1 (MQ=255)
                       gATCTACTGCGAAAGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTAt                                                                                                                                   <  3:829572/144‑1 (MQ=255)
                       gATCTACTGCGAAAGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTAt                                                                                                                                   >  4:829572/1‑144 (MQ=255)
                        aTCTACTGCGAAAGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAac                                                                                                                            <  3:705095/150‑1 (MQ=255)
                              tGCGAAAGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGaa                                                                                                                      <  3:537224/150‑1 (MQ=255)
                              tGCGAAAGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGaa                                                                                                                      >  2:1286219/1‑150 (MQ=255)
                              tGCGAAAGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGGTCGGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGc                                                                                                                                                 >  1:1062845/1‑123 (MQ=255)
                                 gAAAGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTa                                                                                                                                        <  3:133883/129‑1 (MQ=255)
                                 gAAAGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTa                                                                                                                                        >  4:133883/1‑129 (MQ=255)
                                 gAAAGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTg                                                                                                                   >  2:909422/1‑150 (MQ=255)
                                  aaaGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACaaa                                                                                                                             >  2:986383/1‑139 (MQ=255)
                                  aaaGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACaaa                                                                                                                             <  1:986383/139‑1 (MQ=255)
                                  aaaGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGc                                                                                                                  <  3:526888/150‑1 (MQ=255)
                                  aaaGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGc                                                                                                                  <  2:346811/150‑1 (MQ=255)
                                    aGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCt                                                                                                                >  3:86192/1‑150 (MQ=255)
                                         ccTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATgc                                                                                                           >  4:57240/1‑150 (MQ=255)
                                         ccTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATgc                                                                                                           <  4:806197/150‑1 (MQ=255)
                                          cTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATgcg                                                                                                          >  4:23280/1‑150 (MQ=255)
                                            cGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGTTCGCCCTTTTTTACATATGACAAACACAGAATTGCCTGATGCGCt                                                                                                        >  1:1153522/1‑150 (MQ=255)
                                                 aagaaCATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCt                                                                                                   >  4:804597/1‑150 (MQ=255)
                                                 aagaaCATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCt                                                                                                   >  3:319091/1‑150 (MQ=255)
                                                   gaaCATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGc                                                                                                                                                 <  1:910084/102‑1 (MQ=255)
                                                     aCATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATc                                                                                               <  3:721115/150‑1 (MQ=255)
                                                        tCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGa                                                                                                              <  3:588968/132‑1 (MQ=255)
                                                        tCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGa                                                                                                              >  4:588968/1‑132 (MQ=255)
                                                         cGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCTTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGc                                                                                           >  2:247940/1‑150 (MQ=255)
                                                          gCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATc                                                                                               <  1:1216263/145‑1 (MQ=255)
                                                          gCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGAGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATc                                                                                               >  2:1216263/1‑145 (MQ=255)
                                                           cAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCt                                                                                         >  2:690881/1‑150 (MQ=255)
                                                             aGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAACCGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTAc                                                                                       <  4:581974/150‑1 (MQ=255)
                                                                aGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAg                                                                                    <  3:57240/150‑1 (MQ=255)
                                                                  aTTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGa                                                                                  <  1:522827/150‑1 (MQ=255)
                                                                   ttGAGAGAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGAt                                                                                 <  1:873715/150‑1 (MQ=255)
                                                                    tGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATg                                                                                >  2:376990/1‑150 (MQ=255)
                                                                    tGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATg                                                                                >  4:116942/1‑150 (MQ=255)
                                                                    tGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATg                                                                                <  3:464333/150‑1 (MQ=255)
                                                                       gaaagaaGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTg                                                                             >  3:1005743/1‑150 (MQ=255)
                                                                           gaagCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGc                                                                                           <  1:909129/132‑1 (MQ=255)
                                                                           gaagCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGc                                                                                           >  2:909129/1‑132 (MQ=255)
                                                                           gaagCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAat                                                                         <  1:1510265/150‑1 (MQ=255)
                                                                            aagCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAata                                                                        <  1:863369/150‑1 (MQ=255)
                                                                                ggTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATAtt                                                                    <  3:745891/150‑1 (MQ=255)
                                                                                   tGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGaa                                                                 >  3:573339/1‑150 (MQ=255)
                                                                                    gagaTTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAAt                                                                >  3:480937/1‑150 (MQ=255)
                                                                                    gagaTTGTGAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAAt                                                                <  2:1454480/150‑1 (MQ=255)
                                                                                      gaTTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGTCTACGAGGATGGTGCAATATATTGAAttt                                                              <  1:797005/150‑1 (MQ=255)
                                                                                       aTTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTa                                                             >  2:622646/1‑150 (MQ=255)
                                                                                        ttGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTAc                                                                                                                                       >  3:469003/1‑75 (MQ=255)
                                                                                        ttGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTAc                                                                                                                                       <  4:469003/75‑1 (MQ=255)
                                                                                             aGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAAAGAGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCg                                                         >  4:57130/1‑150 (MQ=255)
                                                                                             aGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGAt                                                       >  1:693728/1‑150 (MQ=255)
                                                                                               cGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGAttt                                                     >  1:312335/1‑150 (MQ=255)
                                                                                                 aaGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGa                                                                                                                                 <  2:1294341/72‑1 (MQ=255)
                                                                                                 aaGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGa                                                                                                                                 >  1:1294341/1‑72 (MQ=255)
                                                                                                 aaGTTCTGAAAAACGCGTAAACACATTTAAGAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTg                                                   <  4:406389/150‑1 (MQ=255)
                                                                                                   gTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTa                                                 <  4:1005743/150‑1 (MQ=255)
                                                                                                    ttCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAg                                                >  2:1336000/1‑150 (MQ=255)
                                                                                                    ttCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAg                                                <  4:532438/150‑1 (MQ=255)
                                                                                                       tGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCtttt                                                                                                                                           >  2:907652/1‑56 (MQ=255)
                                                                                                       tGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGcc                                             <  1:1110311/150‑1 (MQ=255)
                                                                                                          aaaaCGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGACCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGa                                          <  1:467552/150‑1 (MQ=255)
                                                                                                           aaaCGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGAt                                         >  3:954523/1‑150 (MQ=255)
                                                                                                              cgggTAACCACATTAAAAAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGNAATATATTGAATNTAAGCGATTTTGTAGGCCGGATAAg                                      <  1:1093961/147‑1 (MQ=255)
                                                                                                                 gTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGc                                                                                           <  2:541533/94‑1 (MQ=255)
                                                                                                                 gTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGc                                                                                           >  1:541533/1‑94 (MQ=255)
                                                                                                                 gTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCg                                   <  4:319091/150‑1 (MQ=255)
                                                                                                                   aaaCACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGtt                                 >  2:878133/1‑150 (MQ=255)
                                                                                                                   aaaCACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGtt                                 <  2:398642/150‑1 (MQ=255)
                                                                                                                     acacATTTAATGAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAg                                                                                             >  2:769746/1‑88 (MQ=255)
                                                                                                                     acacATTTAATGAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAg                                                                                             <  1:769746/88‑1 (MQ=255)
                                                                                                                     acacATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGcc                                                                                                                 <  2:402290/68‑1 (MQ=255)
                                                                                                                     acacATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATc                                                                                               <  3:483062/86‑1 (MQ=255)
                                                                                                                     acacATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATc                                                                                               >  4:483062/1‑86 (MQ=255)
                                                                                                                     acacATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCa                               >  2:683707/1‑150 (MQ=255)
                                                                                                                         aTTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCAcgcc                           >  2:1575242/1‑150 (MQ=255)
                                                                                                                           ttAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCAcgccgc                         >  1:851233/1‑150 (MQ=255)
                                                                                                                             aataaAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGcc                                             <  2:511392/128‑1 (MQ=255)
                                                                                                                             aataaAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGcc                                             >  1:511392/1‑128 (MQ=255)
                                                                                                                               taaAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGAt                                                                                                             >  2:200839/1‑62 (MQ=255)
                                                                                                                               taaAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGAt                                                                                                             <  1:200839/62‑1 (MQ=255)
                                                                                                                                aaaaaa‑‑aGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCg                    >  1:1309375/1‑150 (MQ=255)
                                                                                                                                 aaaaa‑‑aGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGcc                                                                                                                 >  2:939227/1‑56 (MQ=255)
                                                                                                                                 aaaaa‑‑aGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGcc                                                                                                                 <  1:939227/56‑1 (MQ=255)
                                                                                                                                 aaaaa‑‑aGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCgg                   >  2:302718/1‑150 (MQ=255)
                                                                                                                                     a‑‑aGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGACGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCaaa               <  4:150425/150‑1 (MQ=255)
                                                                                                                                         gggCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTACGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCaaaaa             <  1:1278574/150‑1 (MQ=255)
                                                                                                                                            cGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAaacaa          >  2:1335759/1‑150 (MQ=255)
                                                                                                                                             ggTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAaacaac         <  4:86192/150‑1 (MQ=255)
                                                                                                                                             ggTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAaacaac         <  1:1218692/150‑1 (MQ=255)
                                                                                                                                                cGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGaa      <  4:480937/150‑1 (MQ=255)
                                                                                                                                                   aaGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGc                                                                                           <  4:725985/62‑1 (MQ=255)
                                                                                                                                                   aaGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGc                                                                                           >  3:725985/1‑62 (MQ=255)
                                                                                                                                                   aaGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCa                                                                           <  3:111117/78‑1 (MQ=255)
                                                                                                                                                    aGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACt  >  1:244314/1‑150 (MQ=255)
                                                                                                                                                       |                                                                                                                                                  
TCAGGCACGGAAGACGCATATAAGATCTACTGCGAAAGCTTCCTCGGTGAAGAACATCGCAAGCAGATTGAGAAAGAAGCGGTTGAGATTGTTAGCGAAGTTCTGAAAAACGCGTAAACACATTTAATAAAAAA‑‑AGGGCGGTCGCAAGATCGCCCTTTTTTACGTATGACAAACACAGAATTGCCTGATGCGCTACGCTTATCAGGCCTACGAGGATGGTGCAATATATTGAATTTAAGCGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAACAACGAACACT  >  NC_000913_3_pae_tpiA/715082‑715377

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.