New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_pae_tpiA 278350 =155 (1.140)21 (0.160) 17/240 12.9 12.5% coding (453/1047 nt) afuC CP4‑6 prophage; putative ferric transporter subunit
?NC_000913_3_pae_tpiA 278377 = 148 (1.150)coding (426/1047 nt) afuC CP4‑6 prophage; putative ferric transporter subunit
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 157 total aligned reads displayed.

ACAGCGAGGTGATATCAAACTGCTTTTGCAACTCGCGGATCTTGTCGCGCATGCTGCGACGCAGGTTGGCGTCGAGGTTACTCAACGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATCCACCATCGCCAACGCCTCTTTGACGCGGGCTTTCAGCTCTGCGCGCGGTACGCCGAGCATTTTCAGGCCATAACCGACATTCTCTCCCAGCGAC  >  NC_000913_3_pae_tpiA/278229‑278524
                                                                                                                                                    |                                                                                                                                                   
aCAGCGAGGTGATATCAAACTGCTTTTGCAACTCGCGGATCTTGTCGCGCATGCTGCGACGCAGGTTGGCGTCGAGGTTACTCAACGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCgctgct                                                                                                                                                    <  1:66148/150‑1 (MQ=255)
aCAGCGAGGTGATATCAAACTGCTTTTGCAACTCGCGGATCTTGTCGCGCATGCTGCGACGCAGGTTGGCGTCGAGGTTACTCAACGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCgctgct                                                                                                                                                    <  3:576591/150‑1 (MQ=255)
 cAGCGAGGTGATATCAAACTGCTTTTGCAACTCGCGGATCTTGTCGCGCATGCTGCGACGCAGGTTGGCGTCGAGGTTACTCAACGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCgctgctg                                                                                                                                                   >  3:473956/1‑150 (MQ=255)
         tGATATCAAACTGCTTTTGCAACTCGCGGATCTTGTCGCGCATGCTGCGACGCAGGTTGGCGTCGAGGTTACTCAACGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCccgc                                                                                                                                           <  2:768931/150‑1 (MQ=255)
             atCAAACTGCTTTTGCAACTCGCGGATCTTGTCGCGCATGCTGCGACGCAGGTTGGCGTCGAGGTTACTCAACGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCggg                                                                                                                                       >  2:247443/1‑149 (MQ=255)
             atCAAACTGCTTTTGCAACTCGCGGATCTTGTCGCGCATGCTGCGACGCAGGTTGGCGTCGAGGTTACTCAACGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGga                                                                                                                                       >  4:79535/1‑150 (MQ=255)
             atCAAACTGCTTTTGCAACTCGCGGATCTTGTCGCGCATGCTGCGACGCAGGTTGGCGTCGAGGTTACTCAACGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGAACAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGga                                                                                                                                       >  4:1006619/1‑150 (MQ=255)
              tCAAACTGCTTTTGCAACTCGCGGATCTTGTCGCGCATGCTGCGACGCAGGTTGGCGTCGAGGTTACTCAACGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCCCGCGCTGCTGCTGCCCGCCGgag                                                                                                                                      >  2:1273902/1‑150 (MQ=255)
              tCAAACTGCTTTTGCAACTCGCGGATCTTGTCGCGCATGCTGCGACGCAGGTTGGCGTCGAGGTTACTCAACGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGgag                                                                                                                                      >  3:189640/1‑150 (MQ=255)
               cAAACTGCTTTTGCAACTCGCGGATCTTGTCGCGCATGCTGCGACGCAGGTTGGCGTCGAGGTTACTCAACGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGgaga                                                                                                                                     >  4:380544/1‑150 (MQ=255)
                aaaCTGCTTTTGCAACTCGCGGATCTTGTCGCGCATGCTGCGACGCAGGTTGGCGTCGAGGTTACTCAACGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGAt                                                                                                                                    >  1:1452587/1‑150 (MQ=255)
                aaaCTGCTTTTGCAACTCGCGGATCTTGTCGCGCATGCTGCGACGCAGGTTGGCGTCGAGGTTACTCAACGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGAt                                                                                                                                    >  1:357608/1‑150 (MQ=255)
                 aaCTGCTTTTGCAACTCGCGGATCTTGTCGCGCATGCTGCGACGCAGGTTGGCGTCGAGGTTACTCAACGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATc                                                                                                                                   <  4:168479/150‑1 (MQ=255)
                    tGCTTTTGCAACTCGCGGATCTTGTCGCGCATGCTGCGACGCAGGTTGGCGTCGAGGTTACTCAACGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGa                                                                                                                                <  4:220459/150‑1 (MQ=255)
                      cTTTTGCAACTGGCGGATCTTGTCGCGCATGCTGCGACGCAGGTTGGCGTCGAGGTTACTCAACGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATc                                                                                                                              <  2:329442/150‑1 (MQ=255)
                        tttGCAACTCGCGGATCTTGTCGCGCATGCTGCGACGCAGGTTGGCGTCGAGGTTACTCAACGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGa                                                                                                                            <  2:963174/150‑1 (MQ=255)
                             aaCTCGCGGATCTTGTCGCGCATGCTGCGACGCAGGTTGGCGTCGAGGTTACTCAACGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAg                                                                                                                       >  1:1543456/1‑150 (MQ=255)
                               cTCGCGGATCTTGTCGCGCATGCTGCGACGCAGGTTGGCGTCGAGGTTACTCAACGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCg                                                                                                                     <  2:352780/150‑1 (MQ=255)
                                tCGCGGATCTTGTCGCGCATGCTGCGACGCAGGTTGGCGTCGAGGTTACTCAACGGCTCATCACACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCgg                                                                                                                    <  1:573418/150‑1 (MQ=255)
                                tCGCGGATCTTGTCGCGCATGCTGCGACGCAGGTTGGCGTCGAGGTTACTCAACGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCgg                                                                                                                    >  1:610202/1‑150 (MQ=255)
                                tCGCGGATCCTGTCGCGCATGCTGCGACGCAGGTTGGCGTCGAGGTTACTCAACGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCgg                                                                                                                    >  1:1113910/1‑150 (MQ=255)
                                  gcgGATCTTGTCGCGCATGCTGCGACGCAGGTTGGCGTCGAGGTTACTCAACGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTc                                                                                                                  >  1:398957/1‑150 (MQ=255)
                                     gATCTTGTGGCGCATGCTGCGACGCAGGTTGGCGTCGAGGTTACTCAACGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTc                                                                                                               <  1:790044/150‑1 (MQ=255)
                                     gATCTTGTCGCGCATGCTGCGACGCAGGTTGGCGTCGAGGTTACTCAACGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGAACAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTc                                                                                                               <  3:1006619/150‑1 (MQ=255)
                                               cgcATGCTGCGACGCAGGTTGGCGTCGAGGTTACTCAACGGCTCATCAAACAGCAGCCCTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTcc                                                                                                     <  4:508246/150‑1 (MQ=255)
                                               cgcATGCTGCGACGCAGGTTGGCGTCGAGGTTACTCAACGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTcc                                                                                                     <  2:44039/150‑1 (MQ=255)
                                               cgcATGCTGCGACGCAGGTTGGCGTCGAGGTTACTCAACGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTcc                                                                                                     >  2:1384757/1‑150 (MQ=255)
                                                gcATGCTGCGACGCAGGTTGGCGTCGAGGTTACTCAACGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCGACGCGCTGCTGCTGCCCGCCGGAGATCTTATCGACAAAGCGGTCTTCGAATCCTTCCa                                                                                                    <  2:567731/150‑1 (MQ=255)
                                                 cATGCTGCGACGCAGGTTGGCGTCGAGGTTACTCAACGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAg                                                                                                   <  2:557639/150‑1 (MQ=255)
                                                  aTGCTGCGACGCAGGTTGGCGTCGAGGTTACTCAACGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGa                                                                                                  <  1:544193/150‑1 (MQ=255)
                                                   tgctgcGACGCAGGTTGGCGTCGAGGTTACTCAACGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGAt                                                                                                 <  1:1218486/150‑1 (MQ=255)
                                                     ctgcGACGCAGGTTGGCGTCGAGGTTACTCAACGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATcc                                                                                               <  2:357608/150‑1 (MQ=255)
                                                     ctgcGACGCAGGTTGGCGTCGAGGTTACTCAACGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATc                                                                                                >  2:275213/1‑149 (MQ=255)
                                                      tgcGACGCAGGTTGGCGTCGAGGTTACTCAACGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATcca                                                                                              >  1:1370315/1‑150 (MQ=255)
                                                       tcGACGCAGGTTGGCGTCGAGGTTACTCAACGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATccac                                                                                             >  2:463693/2‑150 (MQ=255)
                                                           cGCAGGTTGGCGTCGAGGTTACTCAACGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATCCACCATc                                                                                         >  3:645074/1‑150 (MQ=255)
                                                           cGCAGGTTGGCGTCGAGGTTACTCAACGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATCCACCATc                                                                                         <  1:985084/150‑1 (MQ=255)
                                                           cGCAGGTTGGCGTCGAGGTTACTCAACGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCCGAGATCTGATCGACAAGGCGGTCTTCGAATCCTTCCAGATCCACCATc                                                                                         >  2:1312256/1‑150 (MQ=255)
                                                                gTTGGCGTCGAGGTTACTCAACGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATCCACCATCGCCaa                                                                                    <  2:1543456/150‑1 (MQ=255)
                                                                  tGGCGTCGAGGTTACTCAACGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATc                                                                                                                              >  2:17255/1‑106 (MQ=255)
                                                                  tGGCGTCGAGGTTACTCAACGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATc                                                                                                                              <  1:17255/106‑1 (MQ=255)
                                                                    gCGTCGAGGTTACTCAACGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCt                                                                                                        <  1:1145337/126‑1 (MQ=255)
                                                                    gCGTCGAGGTTACTCAACGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCt                                                                                                        >  2:1145337/1‑126 (MQ=255)
                                                                       tCGAGGTTACTCAACGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATCCACCATCGCCAACGCctct                                                                             >  3:211828/1‑150 (MQ=255)
                                                                           ggTTACTCAACGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATCCACCATCGCCAACGCCTCTTTGa                                                                         <  1:463693/150‑1 (MQ=255)
                                                                                cTCAACGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATCCACCATCGCCAACGCCTCTTTGACGCgg                                                                    <  3:44044/150‑1 (MQ=255)
                                                                                 tCAACGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATCCACCATCGCCAACGCCTCTTTGACGCggg                                                                   >  4:263022/1‑150 (MQ=255)
                                                                                 tCAACGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATCCACCATCGCCAACGCCTCTTTGACGCggg                                                                   >  4:496910/1‑150 (MQ=255)
                                                                                 tCAACGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATCCACCATCGCCAACGCCTCTTTGACGCggg                                                                   >  3:177379/1‑150 (MQ=255)
                                                                                   aaCGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATCCACCATCGCCAACGCCTCTTTGACGCGGGCt                                                                 >  2:737451/1‑150 (MQ=255)
                                                                                    aCGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATCCACCATCGCCAACGCCTCTTTGACGCGGGCtt                                                                >  1:43840/1‑150 (MQ=255)
                                                                                           atcaAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGAt                                                                                                                                    <  2:3032/75‑1 (MQ=255)
                                                                                           atcaAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGAt                                                                                                                                    >  1:2951/1‑75 (MQ=255)
                                                                                           atcaAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGAt                                                                                                                                    >  1:3032/1‑75 (MQ=255)
                                                                                            tcaAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATCCACCATCGCCAACGCCTCTTTGACGCGGGCTTTCAGctc                                                         <  3:847831/149‑1 (MQ=255)
                                                                                             caAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGC‑‑‑GCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATCCACCATCGCCAACGCCTCTTTGACGCGGGCTTTCAGCTCTgcgc                                                    >  2:887449/1‑150 (MQ=255)
                                                                                              aaaCAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATCCACCATCGCCACCGCCTCTTTGACGTGGGCTTTCAGctcgtc                                                      >  4:850975/1‑147 (MQ=255)
                                                                                              aaaCAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATCCACCATCGCCAACGCCTCTTTGACGCGGGCttt                                                               <  1:464350/141‑1 (MQ=255)
                                                                                              aaaCAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATCCACCATCGCCAACGCCTCTTTGACGCGGGCttt                                                               >  2:464350/1‑141 (MQ=255)
                                                                                                      gcaCTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATCCACCATCGCCAACGCCTCCTCGACGCGGGCTTCCAGCTCCGCGCGCGGtc                                              >  2:139744/1‑149 (MQ=255)
                                                                                                        aCTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATCCACCAGCGCCAACGCCTCTTTGACGCGGGCTTTCAGCTCTGCGCGCGGTACg                                            <  3:510414/150‑1 (MQ=255)
                                                                                                         cTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATCCACCATCGCCAACGCCTCTTTGACGCGGGCTTTCAGCTCTGCGCGCGGTACGc                                           <  4:497583/150‑1 (MQ=255)
                                                                                                          tttCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCtt                                                                                                                <  4:672412/80‑1 (MQ=255)
                                                                                                          tttCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCtt                                                                                                                >  3:672412/1‑80 (MQ=255)
                                                                                                            tCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATCCACCATCGCCAACGCCTCTTTGACGCGGGCTTTCAGCTCTGCGCGCGGTACGCCGa                                        <  3:226595/150‑1 (MQ=255)
                                                                                                            tCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATCCACCATCGCCAACGCCTCTTTGACGCGGGCTTTCAGCTCTGCGCGCGGTACGCCGa                                        <  3:79535/150‑1 (MQ=255)
                                                                                                               gCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATCCACCATCGCCAACGCCTCTTTGACGCGGGCTTTCAGCTCTGCGCGCGGTACGCCGAGCa                                     >  4:604882/1‑150 (MQ=255)
                                                                                                                 ttGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATCCACCATCGCCAACGCCTCTTTGCCGCGGGCTTTCAGCTCTGCGCGCGGTACGCCGAGCAtt                                   >  1:523232/1‑150 (MQ=255)
                                                                                                                  tGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATCCACCATc                                                                                         <  3:50173/95‑1 (MQ=255)
                                                                                                                  tGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATCCACCATCGCCAACGCCTCTTTGACGCGGGCTTTCAGCTCTGCGCGCGGTACGCCGAGCAttt                                  >  1:726698/1‑150 (MQ=255)
                                                                                                                  tGAGGATCAGCGCGCGGGCCAGCGCCACACGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGGCTGCGAATCCTTCCAGATCCACCATCGCCAACGCCTCTTTGACGCGGGCTTTCAGCGCTGCGCGCGGTACGCCGAGCAttt                                  >  4:606985/1‑150 (MQ=255)
                                                                                                                   gAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAGTCCTACCAGATCCACCAGCGCCAACGCCTCTTTGACGCGGGCTTTCAGCTCTGCGCGCGGTACGCCGAGCAtttg                                 <  1:1312256/150‑2 (MQ=255)
                                                                                                                   gAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATCCACCATCGCCAACGCCTCTTTGACGCGGGCTTTCAGCTCTGCGCGCGGTACGCCGAGCAtttt                                 <  4:398467/150‑1 (MQ=255)
                                                                                                                     ggATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATCCACCATCGCCAACGCCTCTTTGACGCGGGCTTTCAGCTCTGCGCGCGGTACGCCGAGCATTTTCa                               <  4:79645/150‑1 (MQ=255)
                                                                                                                      gATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATCCACCATCGCCAACGc                                                                                 >  3:642517/1‑99 (MQ=255)
                                                                                                                      gATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATCCACCATCGCCAACGc                                                                                 <  4:642517/99‑1 (MQ=255)
                                                                                                                      gATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATCCACCATCGCCAACGCCTCTTTGACGCGGGCTTTCAGCTCTGCGCGCGGTACGCCGAGCATTTTCAg                              <  1:247443/150‑1 (MQ=255)
                                                                                                                       aTCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATCCACCATCGCCAACGCCTCTTTGACGCGGGCTTTCAGCTCTGCGCGCGGTACGCCGAGCATTTTCAgg                             <  3:577090/150‑1 (MQ=255)
                                                                                                                        tCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTc                                                                                                      <  1:69371/76‑1 (MQ=255)
                                                                                                                         cAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATCCACCATCGCCAACGCCTCTTTGACGCGGGCTTTCAGCTCTGCGCGCGGTACGCCGAGCATTTTCAGGcc                           <  2:582169/150‑1 (MQ=255)
                                                                                                                           gcgcgcGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGt                                                                                                                   >  3:45852/1‑60 (MQ=255)
                                                                                                                           gcgcgcGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGt                                                                                                                   <  4:45852/60‑1 (MQ=255)
                                                                                                                           gcgcgcGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATCCACCATCGCCAACGCCTCTTTg                                                                          >  4:388157/1‑101 (MQ=255)
                                                                                                                           gcgcgcGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATCCACCATCGCCAACGCCTCTTTg                                                                          <  3:388157/101‑1 (MQ=255)
                                                                                                                              cgcgGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATCCACCATCGCCAACGCCTCTTTGACGCGGGCTTTCAGCTCTGCGCGCGGTACGCCGAGCATTTTCAGGCCATAAc                      <  2:741698/150‑1 (MQ=255)
                                                                                                                                 gggCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATCCACCATCGCCAACGCCTCTTTGACGCGGGCTTTCAGCTCTGCGCGCGGTACGCCGAGCATTTTCAGGCCATAACCGa                   <  2:610202/150‑1 (MQ=255)
                                                                                                                                 gggCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATCCACCATCGCCAACGCCTCTTTGACGCGGGCTTTCAGCTCTGCGCGCGGTACGCCGAGCATTTTCAGGCCATAACCGa                   >  2:833011/1‑150 (MQ=255)
                                                                                                                                      aGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATCCACCATCGCCAACGCCTCTTTGACGCGGGCTTTCAGCTCTGCGCGCGGTACGCCGAGCATTTTCAGGCCATAACCGACAAtc              <  4:473956/150‑1 (MQ=255)
                                                                                                                                       gcgcCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTc                                                                                                      <  3:3873/61‑1 (MQ=255)
                                                                                                                                        gcccgcgcgCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATCCACCATCGCCAACGCCTCTTTGACGCGGGCTTTCAGCTCTGCGCGCGGTACGCCGAGCATTTTCAGGCCATAACCGACATtctc            >  2:667951/6‑150 (MQ=255)
                                                                                                                                        cgcCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAg                                                                                                   >  3:632201/1‑63 (MQ=255)
                                                                                                                                        cgcCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATCCACCATCGCCAACGCCTCTTTGACGCGGGCTTTCAGCTCTGCGCGCGGTACGCCGAGCATTTTCAGGCCATAACCGACATtctc            <  3:9861/150‑1 (MQ=255)
                                                                                                                                          ccACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATCCACCATCGCCAACGCCTCTTTGACGCGGGCTTTCAGCTCTGCGCGCGGTACGCCGAGCATTTTCAGGCCATAACCGACATtctctc          >  1:746215/1‑150 (MQ=255)
                                                                                                                                          ccACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCGTCGAATCCTTCCAGATCCCCCATCGCCAACGCCTCTTTGACGCGGGCTTTCAGCTCTGCGCGCGGTACGCCGAGCATTTTCCGGCCATAACCGACATtgtctc          >  4:147744/1‑150 (MQ=255)
                                                                                                                                           cACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATccacca                                                                                           >  2:1024603/1‑68 (MQ=255)
                                                                                                                                           cACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATccacca                                                                                           <  1:1024603/68‑1 (MQ=255)
                                                                                                                                           cACGCGCTGCTGCTGCCCGCCGGAGATCTGAACGACAAAGCGGTCTTCGAATCCTTCCAGATCCACCATCGCCAACGCCTCTTTGACGCGGGCTTTCAGCCCTGCGCCCGGTACGCCGAGCATTTTCAGGCCATAACCGACATCCTCTcc         >  4:246869/1‑150 (MQ=255)
                                                                                                                                               cgcTGATTCTTCCCGCCGGGGATCTGATCGACAAAGCGGTCTTCGAAACCTTCCAGATCCACAACCGCCAACGCCTCTTAGACGCGGGCTTTCTGCTCTGCGCGCGGTACTACGAGCATATTCAAGGCGAAACCGACATTCTCACCCAGc     <  4:189640/150‑1 (MQ=255)
                                                                                                                                                    ctgctgcCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATCCACCATCGCCAACGCCTCTTTGACGCGGGCTTTCCGCTCTGCGCGCGGTACGCCGAGc                                      <  2:1565867/112‑1 (MQ=255)
                                                                                                                                                    ctgctgcCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATCCACCATCGCCAACGCCTCTTTGACGCGGGCTTTCAGCTCTGCGCGCGGTACGCCGAGc                                      >  1:1565867/1‑112 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
ACAGCGAGGTGATATCAAACTGCTTTTGCAACTCGCGGATCTTGTCGCGCATGCTGCGACGCAGGTTGGCGTCGAGGTTACTCAACGGCTCATCAAACAGCAGCACTTTCGGCTTGAGGATCAGCGCGCGGGCCAGCGCCACGCGCTGCTGCTGCCCGCCGGAGATCTGATCGACAAAGCGGTCTTCGAATCCTTCCAGATCCACCATCGCCAACGCCTCTTTGACGCGGGCTTTCAGCTCTGCGCGCGGTACGCCGAGCATTTTCAGGCCATAACCGACATTCTCTCCCAGCGAC  >  NC_000913_3_pae_tpiA/278229‑278524

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.