| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_pae_tpiA | = 1217417 | 17 (0.110) | 145 (0.970) | 98/254 | 0.4 | 89.5% | coding (90/1524 nt) | ycgG | putative membrane‑anchored cyclic‑di‑GMP phosphodiesterase |
| ? | NC_000913_3_pae_tpiA | 1467910 = | NA (NA) | intergenic (+6/+11) | ydbA/insD1 | pseudogene, autotransporter homolog; interrupted by IS2 and IS30/IS2 transposase TnpB | |||||
Only 100 of 349 total aligned reads displayed.
CCAGCGCGAGCGAATGAATGGCATTTTCATGTATTAAACCCTTTGGCCGGGACAAGCAAATGCGCAATACACTCATACCCATCCTCGTTGCGATATGCTTGTTTATTACCGGTGTCGCTATTTTGAACATCCAGCTCTGGTATTCCGCAAAAGCAGAGTACCTGGCGGGAGCGAGATATGCCGCCAACAATATCAATCATATACTTGAAGAAGCGTCACAAGCGACTCAAACAGCGGTTAACATTGCCGGGAAGGAATGCAACCTCGAGGAGCAATATCAGCTTGGCACTGAAGCAGC > NC_000913_3_pae_tpiA/1217269‑1217566 | tttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagcctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCGCaaa < 2:911653‑M1/7‑1 (MQ=255) cAGCGCGAGCGAATGAATGGCATTTTCATGTATTAAACCCTTTGGCCGGGACAAGCAAATGCGCAATACACTCATACCCATCCTCGTTGCGATATGCTTGTTTATTACCGGTGTCGCTATTTTGAACATCCAGCTCTGGTATTCCGCAtg > 1:44196‑M1/1‑148 (MQ=255) gtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCGCAAAAGCaga > 1:699081‑M1/138‑150 (MQ=255) gtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCGCAAAAGCaga > 1:962175‑M1/138‑150 (MQ=255) tggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCGCAAAAGCAGAGTa > 1:787193‑M1/135‑150 (MQ=255) gtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCGCAAAAGCAGAGTAcc > 1:1699938‑M1/133‑150 (MQ=255) acgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactagcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCGCAAAAGCAGAGTACCTg < 3:675155‑M1/20‑1 (MQ=255) acgccgcctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCGCAAAAGCAGAGTACCTg < 4:857256‑M1/20‑1 (MQ=255) cgccggctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCGCAAAAGCAGAGTACCTgg > 3:448821‑M1/130‑150 (MQ=255) tgGCATTTTCATGTATTAAACCCTTTGGCCGGGACAAGCAAATGCGCAATACACTCATACCCATCCTCGTTGCGATATGCTTGTTTATTACCGGTGTCGCTATTTTGAACATCCAGCTCTGGTATTCCGCAtggatttgcccctatattt > 1:1155213‑M1/1‑131 (MQ=255) gtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattctgggggccagtctaCCGCAAAAGCAGAGTACCTGGCGGGAGCgag < 2:1188536‑M1/31‑1 (MQ=255) tttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCGCAAAAGCaga > 1:1295592‑M1/119‑131 (MQ=255) ttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtggtattggttgtctggagattcagggggccagtctaCCGCAAAAGCAGAGTACCTGGCGGGAGCGAGat < 3:58765‑M1/33‑1 (MQ=255) ttatccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCGCAAAAGCAGAGTACCTGGCGGGAGCGAGat > 2:1413661‑M1/118‑150 (MQ=255) aTGTATTAAACCCTTTGGCCGGGACAAGCAAATGCGCAATACACTCATACCCATCCTCGTTGCGATGTGCTTGTTTATTACCGGTGTCGCTATTTTGAACATCCAGCTCTGGTATTCCGCAtggatttgcccctatatttccagacatct < 1:895745‑M1/150‑30 (MQ=255) aTGTATTAAACCCTTTGGCCGGGACAAGCAAATGCGCAATACACTCATACCCATCCTCGTTGCGATATGCTTGTTTATTACCGGTGTCGCTATTTTGAACATCCAGCTCTGGTATTCCGCAtggatttgcccctatatttccagacatct > 1:914335‑M1/1‑121 (MQ=255) tccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCGCAAAAGCAGAGTACCTGGCGGGAGCGAGat > 4:266114‑M1/115‑147 (MQ=255) gTATTAAACCCTTTGGCCGGGACAAGCAAATGCGCAATACACTCATACCCATCCTCGTTGCGATATGCTTGTTTATTACCGGTGTCGCTATTTTGAACATCCAGCTCTGGTATTCCGCAAAAGCAGAGTACCTGGCGGGAGCGAGATATg > 2:237399/1‑150 (MQ=255) aTTAAACCCTTTGGCCGGGACAAGCAAATGCGCAATACACACCTACCCATCCTCGTTGCGATATGCTTGTTTATTACCGGAGTCGCTATTTTGAACATCCAGCTCTGGTATTCCGCAtggatttgcccctatatttccagacatctgtta > 2:528896‑M1/1‑117 (MQ=255) ttAAACCCTTTGGCCGGGACAAGCAAATGCGCAATACACTCATACCCATCCTCGTTGCGATATGCTTGTTTATTACCGGTGTCGCTATTTTGAACATCCAGCTCTGGTATTCCGCAtggatttgcccctatatttccagacatctgttat > 2:1507111‑M1/1‑116 (MQ=255) gacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCGCAAAAGCAGAGTACCTGGCGGGAGCGAGat > 2:634271‑M1/104‑136 (MQ=255) tGGCCGGGACAAGCAAATGCGCAATACACTCATACCCATCCTCGTTGCGATATGCTTGTTTATTACCGGTGTCGCTATTTTGAACATCCAGCTCTGGTATTCCGCAtggatttgcccctatatttccagac > 1:553812‑M1/1‑106 (MQ=255) ccGGGACAAGCAAATGCGCAATACACTCATACCCATCCTCGTTGCGATATGCTTGTTTATTACCGGTGTCGCTATTTTGAACATCCAGCTCTGGTATTCCGCAtggatttgccc < 2:323942‑M1/114‑12 (MQ=255) aatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCGCAAAAGCAGAGTACCTGGCGGGAGCGAGATATGCCGCCAACAATatcaat > 4:19530‑M1/98‑150 (MQ=255) aatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCGCAAAAGCAGAGTACCTGGCGGGAGCGAGATATGCCGCCAACAATatcaat > 2:985730‑M1/98‑150 (MQ=255) gggACAAGCAAATGCGCAATACACTCATACCCATCCTCGTTGCGATATGCTTGTTTATTACCGGTGTCGCTATTTTGAACATCCAGCTCTGGTATTCCGCAtggatttgcccctatatttccagacatctgttatcacttaacccattac > 3:715194‑M1/1‑101 (MQ=255) gACAAGCAAATGCGCAATACACTCATACCCATCCTCGTTGCGATATGCTTGTTTATTACCGGTGTCGCTATTTTGAACATCCAGCTCTGGTATTCCGCAtggatttgcccctatatttccagacatctgttatcacttaacccattacaa < 1:1507111‑M1/150‑52 (MQ=255) tctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCGCAAAAGCAGAGTACCTGGCGGGAGCGAGATATGCCGCCAACAATATCAATCatat < 1:207666‑M1/58‑1 (MQ=255) aaGCAAATGCGCAATACACTCATACCCATCCTCGTTGCGATATGCTTGTTTATTACCGGTGTCGCTATTTTGAACATCCAGCTCTGGTATTCCGCAAAAGCAGAGTACCTGGCGGGAGCGAGATATGCCGCCAACAata < 3:246536/139‑1 (MQ=255) gCAAATGCGCAATACACTCATACCCATCCTCGTTGCGATATGCTTGTTTATTACCGGTGTCGCTATTTTGAACATCCAGCTCTGGTATTCCGCAtggatttgcccctatatttccagacatctgttatca > 1:1448244‑M1/1‑94 (MQ=255) ttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCGCAAAAGCAGAGTACCTGGCGGGAGCGAGATATGCCGCCAACAATATCAATCATATACtt < 1:1175231‑M1/62‑1 (MQ=255) tccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCGCAAAAGCAGAGTACCTGGCGGGAGCGAGATATGCCGCCAACAATATCAATCATATACTTgaa < 4:754737‑M1/65‑1 (MQ=255) gcgcAATACACTCATACCCATCCTCGTTGCGATATGCTTGTTTATTACCGGTGTCGCTATTTTGAACATCCAGCTCTGGTATTCCGCAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccg < 2:54700‑M1/150‑63 (MQ=255) actagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCGCAAAAGCAGAGTACCTGGCGGGAGCGAGATATGCCGCCAACAATATCAATCATATACt < 2:1288046‑M1/61‑1 (MQ=255) actagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagactaCCGCAAAAGCAGAGTACCTGGCGGGAGCGAGATATGCCGCcaac > 2:1126602‑M1/79‑122 (MQ=255) ctagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCGCAAAAGCAGAGTACCTGGCGGGAGCGAGATATGCCGCCAACAATATCAATCATATACTTGAAGAAGCGTc > 2:1647225‑M1/78‑150 (MQ=255) tagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCGCAAAAGCAGAGTACCTGGCGGGAGCGAGATATGCCGCCAACAATATCAATCATATACTTGAAGAAGCGTca < 1:420427‑M1/74‑1 (MQ=255) tagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCGCAAAAGCAGAGTACCTGGCGGGAGCGAGATATGCCGCCAACAATATCAATCATATACTTGAAGAAGCGTca > 4:338944‑M1/77‑150 (MQ=255) acacTCATACCCATCCTCGTTGCGATATGCTTGTTTATTACCGGTGTCGCTATTTTGAACATCCAGCTCTGGTATTCCGCAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatat < 1:1591340‑M1/150‑70 (MQ=255) agtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCGCAAAAGCAGAGTACCTGGCGGGAGCGAGATATGCCGCCAACAATATCAATCATATACTTGAAGAAGCGTcac > 3:754737‑M1/76‑150 (MQ=255) acTCATACCCATCCTCGTTGCGATATGCTTGTTTATTACCGGTGTCGCTATTTTGAACATCCAGCTCTGGTATTCCGCAtggatttgc > 2:1595052‑M1/1‑79 (MQ=255) tCATACCCATCCTCGTTGCGATATGCTTGTTTATTACCGGTGTCGCTATTTTGAACATCCAGCTCTGGTATTCCGCAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattccc < 1:246425‑M1/150‑74 (MQ=255) taaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCGCAAAAGCAGAGTACCTGGCGGGAGCGAGATATgccgc > 4:242102‑M1/72‑111 (MQ=255) aTACCCATCCTCGTTGCGATATGCTTGTTTATTACCGGTGTCGCTATTTTGAACATCCAGCTCTGGTATTCCGCAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgt < 3:1078528‑M1/150‑76 (MQ=255) aTACCCATCCTCGTTGCGATATGCTTGTTTATTACCGGTGTCGCTATTTTGAACATCCAGCTCTGGTATTCCGCAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattc < 1:1618057‑M1/146‑72 (MQ=255) aTACCCATCCTCGTTGCGATATGCTTGTTTATTACCGGTGTCGCTATTTTGAACATCCAGCTCTGGTATTCCGCAtggatttgaccctatattaccagaaatctgttataacaaaacccattacaagcccgctgcagcagatattcccgt > 1:266592‑M1/1‑75 (MQ=255) tACCCATCCTCGTTGCGATATGCTTGTTTATTACCGGTGTCGCTATTTTGAACATCCAGCTCTGGTATTCCGCAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgct > 4:16596‑M1/1‑74 (MQ=255) tACCCATCCTCGTTGCGATATGCTTGTTTATTACCGGTGTCGCTATTTTGAACATCCAGCTCTGGTATTCCGCAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgct < 3:16596‑M1/132‑59 (MQ=255) aaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCGCAAAAGCAGAGTACCTGGCGGGAGCGAGATATGCCGCCAACAATATCAATCATATACTTGAAGAAGCGTCACAAGCGa > 1:746269‑M1/70‑150 (MQ=255) aaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCGCAAAAGCAGAGTACCTGGCGGGAGCGAGATATGCCGCCAACAATATCAATCATATACTTGAAGAAGCGTCACAAGCGa < 1:371591‑M1/81‑1 (MQ=255) aCCCATCCTCGTTGCGATATGCTTGTTTATTACCGGTGTCGCTATTTTGAACATCCAGCTCTGGTATTCCGCAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtgg < 1:1042022‑M1/150‑78 (MQ=255) aCCCATCCTCGTTGCGATATGCTTGTTTATTACCGGTGTCGCTATTTTGAACATCCAGCTCTGGTATTCCGCAtggatttgcccctatatctccagacatctgttatcacttaccccattacaagcccgctgccgcagatattcccgtgg < 3:354804‑M1/150‑78 (MQ=255) aCCCATCCTCGTTGCGATATGCTTGTTTATTACCGGTGTCGCCATTTTTAACATCCGGCTCTGGTATTCCGCAtggatttgcccctatatttcccgacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtgg > 2:16559‑M1/1‑73 (MQ=255) actagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCGCAAAAGCAGAGTACCTGGCGGGAGCGAGATATGCCGCCAACAATATCAATCATATACTTGAAGAAGCGTCACAAGCGACTc < 1:280485‑M1/84‑1 (MQ=255) tagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCGCAAAAGCAGAGTACCTGGCGGGAGCGAGATATGCCGCCAACAATATCAATCATATACTTGAAGAAGCGTCACAAGCGACTCaa < 1:1011092‑M1/86‑1 (MQ=255) tagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCGCAAAAGCAGAGTACCTGGCGGGAGCGAGATATGCCGCCAACAATATCAATCATATACTTGAAGAAGCGTCACAAGCGACTCaa < 2:737326‑M1/86‑1 (MQ=255) aTCCTCGTTGCGATATGCTTGTTTATTACCGGTGTCGCTATTTTGAACATCCAGCTCTGGTATTCCGCAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgag > 3:840114‑M1/1‑69 (MQ=255) agtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCGCAAAAGCAGAGTACCTGGCGGGAGCGAGATATGCCGCCAACAATATCAATCATATACTTGAAGAAGCGTCACAAGCGACTCaaa > 3:206262‑M1/64‑150 (MQ=255) tCGTTGCGATATGCTTGTTTATTACCGGTGTCGCTATTTTGAACATCCAGCTCTGGTATTCCGCAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgat > 4:616262‑M1/1‑65 (MQ=255) attaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCGCAAAAGCAGAGTACCTGGCGGGAGCGAGATATgcc > 2:1141142‑M1/61‑98 (MQ=255) ttaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCGCAAAAGCAGAGTACCTGGCGGGAGCGAGATATGCCGCCAACAATATCAATCATATACTTGAAGAAGCGTCACAAGCGACTCAAACAGc < 1:1371621‑M1/91‑1 (MQ=255) tGCGATATGCTTGTTTATTACCGGTGTCGCTATTTTGAACATCCAGCTCTGGTATTCCGCAtggatttgccc > 1:1235338‑M1/1‑61 (MQ=255) tGCGATATGCTTGTTTATTACCGGTGTCGCTATTTTGAACATCCAGCTCTGGTATTCCGCAtggatttgccc < 2:1235338‑M1/72‑12 (MQ=255) caatatcacttaaataagtgatattggttgtctggagattcagggggccagtctaCCGCAAAAGCAGAGTACCTGGCGGGAGCGAGATATGCCGCCAACAATATCAATCATATACTTGAAGAAGCGTCACAAGCGACTCAAACAGCGGtt < 2:357223‑M1/95‑1 (MQ=255) ctatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCGCAAAAGCAGAGTACCTGGCGGGAGCGAGATATGCCGCCAACAATATCAATCATATACTTGAAGAAGCGTCACAAGCGACTCAAACAGCGGTTaa > 2:269846‑M1/54‑150 (MQ=255) atcacttatttaagtgatattggttgtctggagattcagggggccagtctaCCGCAAAAGCAGAGTACCTGGCGGGAGCGAGATATGCCGCCAACAATATCAATCATATACTTGAAGAAGCGTCACAAGCGACTCAAACAGCGGTTAACa > 2:1371621‑M1/52‑150 (MQ=255) cttatttaagtgatattggttgtctggagattcagggggccagtctaCCGCAAAAGCAGAGTACCTGGCGGGAGCGAGATATgc > 1:500895‑M1/48‑84 (MQ=255) tttaagtgatattggttgtctggagattcagggggccagtctaCCGCAAAAGCAGAGTACCTGGCGGGAGCGAGATATGCCGCCAACAATatcaat < 4:446077‑M1/53‑1 (MQ=255) tttaagtgatattggttgtctggagattcagggggccagtctaCCGCAAAAGCAGAGTACCTGGCGGGAGCGAGATATGCCGCCAACAATATCAATCATATACTTGAAGAAGCGTCACAAGCGACTCAAACAGCGGTTAACATTGCCggg < 4:921981‑M1/107‑1 (MQ=255) agtgatattggttgtctggagattcagggggccagtctaCCGCAAAAGCa < 1:1811507‑M1/11‑1 (MQ=255) aCCGGTGTCGCTATTTTGAACATCCAGCTCTGGTATTCCGCAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgc > 1:1653533‑M1/1‑42 (MQ=255) ggTGTCGCTATTTTGAACATCCAGCTCTGGTATTCCGCAAAAGCAGAGTACCTGGCGGGAGCGAGATATGCCGCCAACAATATCAATCATATACTTGAAGAAGCGTCACAAGCGACTCAAACAGCGGTTAACATTGCCGGGAAGGAATGc < 2:611139/150‑1 (MQ=255) attggttgtctggagattcagggggccagtctaCCGCAAAAGCAGAGTACCTGGCGGGAGCGAGATATGCCGCCAACAATATCAATCATATACTTGAAGAAGCGTCACAAGCGACTCAAACAGCGGTTAACATTGCCGggaag > 3:794866‑M1/34‑143 (MQ=255) tgtCGCTATTTTGAACATCCAGCTCTGGTATTCCGCAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattc > 4:692746‑M1/1‑37 (MQ=255) gtCGCTATTTTGAACATCCAGCTCTGGTATTCCGCAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcg < 1:60668‑M1/150‑115 (MQ=255) gttgtctggagattcagggggccagtctaCCGCAAAAGCAGAGTACCTGGCGGGAGCGAGat < 2:916819‑M1/33‑1 (MQ=255) gttgtctggagattcagggggccagtctaCCGCAAAAGCAGAGTACCTGGCGGGAGCGAGATATGCCGCCAACAATatcaatca > 2:105398‑M1/30‑84 (MQ=255) gCTATTTTGAACATCCAGCTCTGGTATTCCGCAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgtta < 3:938206‑M1/150‑118 (MQ=255) ctggagattcagggggccagtctaCCGCAAAAGCAGAGTACCTGGCGGGAGCGAGATATGCCGCCAACAATATCAATCATATACTTGAAGAAGCGTCACAAGCGACTCAAACAGCGGTTAACATTGCCGGGAAGGAATGCAACCTCgagg > 2:185785‑M1/25‑150 (MQ=255) tggagattcagggggccagtctaCCGCAAAAGCAGAGTACCTGGCGGGAGCGAGATATGCCGCCAACAATATCAATCATATACTTGAAGAAGCGTCACAAGCGACTCAAACAGCGGTTAACATTGCCGGGAAGGAATGCAACCTCgagga < 2:1299467‑M1/127‑1 (MQ=255) ggagattcagggggccagtctaCCGCAAAAGCAGAGTACCTGGCGGGAGCGAGATATGCCGCCAACAATATCAATCATATACTTGAAGAAGCGTCACAAGCGACTCAAACAGCGGTTAACATTGCCggg > 4:1035559‑M1/23‑129 (MQ=255) ggagattcagggggccagtctaCCGCAAAAGCAGAGTACCTGGCGGGAGCGAGATATGCCGCCAACAATATCAATCATATACTTGAAGAAGCGTCACAAGCGACTCAAACAGCGGTTAACATTGCCGGGAAGGAATGCAACCt > 2:415541‑M1/23‑143 (MQ=255) tGAACATCCAGCTCTGGTATTCCGCAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgct < 1:125225‑M1/150‑125 (MQ=255) gAACATCCAGCTCTGGTATTCCGCAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctc < 1:1110352‑M1/150‑126 (MQ=255) aTCCAGCTCTGGTATTCCGCAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaac > 4:1009228‑M1/1‑21 (MQ=255) aTCCAGCTCTGGTATTCCGCAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaac < 2:763672‑M1/150‑130 (MQ=255) aTCCAGCTCTGGTATTCCGCAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataa > 2:436892‑M1/1‑21 (MQ=255) cagggggccagtctaCCGCAAAAGCAGAGTACCTGGCGGGAGCGAGATATGCCGCCAACAATATCAATCATATACTTGAAGACGCGTCACAACCGACTCAAACAGCGGTTAACATTGCCGGGAAGGAATGCAACCTCGAGGAGCAATATc > 2:1540345‑M1/16‑150 (MQ=255) ccAGCTCTGGTATTCCGCAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccag < 4:801780‑M1/111‑93 (MQ=255) ggggccagtctaCCGCAAAAGCAGAGTACCTGGCGGGAGCGAGATATGCCGCCAACAATATCAATCATATACTTGAAGAAGCGTCACAAGCGACTCAAACAGCGGTTAACATTGCCGGGAAGGAATGCAACCTCGAGGAGCAat < 3:419795‑M1/132‑1 (MQ=255) tctGGTATTCCGCAtggatttgcccctatatttccagacatctgttatcacttaaccc > 3:513364‑M1/1‑14 (MQ=255) tctGGTATTCCGCAtggatttgcccctatatttccagacatctgttatcacttaaccc < 4:513364‑M1/58‑45 (MQ=255) cagtctaCCGCAAAAGCAGAGTACCTGGCGGGAGCGAGATATGCCGCCAACAATATCAATCATATACTTGAAGAAGCGTCACAAGCGACTCAAACAGCGGTTAACATTGCCGGGAAGGAATGCAACCTCGAGGAGCAATATCAGCTTGGc > 4:58765‑M1/8‑150 (MQ=255) gTATTCCGCAtggatttgcccctatatttccagacat > 2:1475339‑M1/1‑10 (MQ=255) tATTCCGCAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaagg > 1:808302‑M1/1‑9 (MQ=255) ttCCGCAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgcca < 3:1034269‑M1/117‑111 (MQ=255) cGCAAAAGCAGAGTACCTGGCGGGAGCGAGATATGCCGCCAACAATATCAATCATATACTTGAAGAAGCGTCACAAGCGACTCAAACAGCg < 2:1760341/91‑1 (MQ=255) cGCAAAAGCAGAGTACCTGGCGGGAGCGAGATATGCCGCCAACAATATCAATCATATACTTGAAGAAGCGTCACAAGCGACTCAAACAGCg > 1:1760341/1‑91 (MQ=255) cGCAAAAGCAGAGTACCTGGCGGGAGCGAGATATGCCGCCAACAATATCAATCATATACTTGAAGAAGCGTCACAAGCGACTCAAACAGCGGTTAACATTGCCGGGAAGGAATGCAACCTCGAGGAGCAATATCAGCTTGGCACTGAagc < 2:445610/150‑1 (MQ=255) gCAAAAGCAGAGTACCTGGCGGGAGCGAGATATGCCGCCAACAATATCAATCATATACTTGAAGAAGCGTCACAAGCGACTCAAACAGCGGTTAACATTGCCGGGAAGGAATGCAACCTCGAGGAGCAATATCAGCTTGGCACTGAagca > 3:292006/1‑150 (MQ=255) | CCAGCGCGAGCGAATGAATGGCATTTTCATGTATTAAACCCTTTGGCCGGGACAAGCAAATGCGCAATACACTCATACCCATCCTCGTTGCGATATGCTTGTTTATTACCGGTGTCGCTATTTTGAACATCCAGCTCTGGTATTCCGCAAAAGCAGAGTACCTGGCGGGAGCGAGATATGCCGCCAACAATATCAATCATATACTTGAAGAAGCGTCACAAGCGACTCAAACAGCGGTTAACATTGCCGGGAAGGAATGCAACCTCGAGGAGCAATATCAGCTTGGCACTGAAGCAGC > NC_000913_3_pae_tpiA/1217269‑1217566 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |