New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_pae_tpiA	4082549 =	52 (1.300)	5 (0.130)	5/260	4.7	8.8%	coding (211/903 nt)	fdoH	formate dehydrogenase‑O, Fe‑S subunit
	?	NC_000913_3_pae_tpiA	4082575 =	55 (1.470)					coding (185/903 nt)	fdoH	formate dehydrogenase‑O, Fe‑S subunit
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GCTTTCAGGCAGCCTGGATCGGAACAGTGCATACAGCCGTCTTTGCGGATCAGCCATTCCAGTTTGTCGTTCTGCTCCACTTCCGAGAAGCGCATTACCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGC  >  NC_000913_3_pae_tpiA/4082428‑4082723                                                                                                                                                    |                                                                                                                                                     gCTTTCAGGCAGCCTGGATCGGAACAGTGCATACAGCCGTCTTTGCGGATCAGCCATTCCAGTTTGTCGTTCTGCTCCACTTCCGAGAAGCGCATTACCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGtt                                                                                                                                                     >  1:466220/1‑149 (MQ=255) gCTTTCAGGCAGCCTGGAGCGGAACAGTGCATACAGCCGTCTTTGCGGATCAGCCATTCCAGTTTGTCGTTCTGCTCCACTTCCGAGAAGCGCATTACCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGtt                                                                                                                                                     <  1:323195/149‑1 (MQ=255)    ttCAGGCAGCCTGGATCGGAACAGTGCATACAGCCGTCTTTGCGGATCAGCCATTCCAGTTTGTCGTTCTGCTCCACTTCCGAGAAGCGCATTACCGTCCACGATTTGGAGATCGGACGATGGGGGTTGTCGTACACCCCAATGTTAtt                                                                                                                                                  <  2:512794/149‑1 (MQ=38)      cAGGCAGCCTGGATCGGAACAGTGCATACAGCCGTCTTTGCGGATCAGCCATTCCAGTTTGTCGTTCTGCTCCACTTCCGAGAAGCGCATTACCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGCCGTACACCCCAATGTTATTGc                                                                                                                                                <  2:626613/149‑1 (MQ=255)         gCAGCCTGGATCGGAACAGTGCATACAGCCGTCTTTGCGGATCAGCCATTCCAGTTTGTCGTTCTGCTCCACTTCCGAGAAGCGCATTACCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTAAACCACAATGTTATTGCCGa                                                                                                                                             >  1:452401/1‑149 (MQ=255)           aGCCTGGATCGGAACAGTGCATACAGCCGTCTTTGCGGATCAGCCATTCCAGTTTGTCGTTCTGCTCCACTTCCGAGAAGCGCATTACCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACg                                                                                                                                           <  1:652099/149‑1 (MQ=255)             ccTGGATCGGAACAGTGCATACAGCCGTCTTTGCGGATCAGCCATTCCAGTTTGTCGTTCTGCTCCACTTCCGAGAAGCGCATTACCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGt                                                                                                                                         >  1:469913/1‑149 (MQ=255)               tGGATCGGAACAGTGCATACAGCCGTCTTTGCGGATCAGCGATTCCAGTTTGTCGTTCTGCTCCACTTCCGAGAAGCGCATTACCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTAt                                                                                                                                       <  1:29498/149‑1 (MQ=255)                  aTCGGAACAGTGCATACAGCCGTCTTTGCGGATCAGCCATTCCAGTTTGTCGTTCTGCTCCACTTCCGAGAAGCGCATTACCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCTACGGAATcgc                                                                                                                                    >  2:467626/1‑149 (MQ=255)                   acGGAACAGTTCTTACAGCCGTCTTTGCGGATCAGCCATTCCAGTTTGTCGTTCTGCTCCACTTCCGAGAAGCGAATTACCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCATTGTTATTGCCCACGCTATcgcg                                                                                                                                   >  2:515261/2‑149 (MQ=255)                            tGCATACAGCCGTCTTTGCGGATCAGCCATTCCAGTTTGTCGTTCTGCTCCACTTCCGAGAAGCGCATTACCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGtt                                                                                                                          <  1:240003/149‑1 (MQ=255)                              cATACAGCCGTCTTTGCGGATCAGCCATTCCAGTTTGTCGTTCTGCTCCACTTCCGAGAAGCGCATTACCGTCCACGATTTGGCGCTTAAATGATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTcc                                                                                                                        >  1:700466/1‑149 (MQ=255)                              cATACAGCCGTCTTTGCGGATCAGCCATTCCAGTTTGTCGTTCTGCTCCACTTCCGAGAAGCGCATTACCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTcc                                                                                                                        >  1:699907/1‑149 (MQ=255)                                 aCAGCCGTCTTTGCGGATCAGCCATTCCAGTTTGTCGTTCTGCTCCACTTCCGAGAAGCGCATTACCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAACGTTATTGCCGACGGTATCGCGAATGTCTTTCCAct                                                                                                                     >  2:417124/1‑149 (MQ=255)                                   aGCCGTCTTTGCGGATCAGCCATTCCAGTTTGTCGTTCTGCTCCACTTCCGAGAAGCGCATTACCGTCCACGCTTTGGCGCTTAAATCATTGGGGTTGTCGTCCACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCActct                                                                                                                   >  1:19401/1‑149 (MQ=255)                                        tCTTTGCGAATCAGCCATTGCAGTTTGTCGTTCTGCTCCACTTCCGAGAAGCGCATTACCGTCCACGATTTGGCGCTTGAATCATTGGGGTGATGGTACACCCAAATGTTATTGCCGACGGTGTAGAGAATATCGTTCCAATCTGcaca                                                                                                              >  2:601701/1‑149 (MQ=255)                                          tttGCGGATCAGCCATTCCAGTTTGTCGTTCTGCTCCACTTCCGAGAAGCGCATTACCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCCCCGCTATCGCGAATGTCGTTTCACTCTGcacaag                                                                                                            >  2:667612/1‑147 (MQ=255)                                                gATCGGCCATTCCATTTTGTCGTTCTGCTCCCCTTCCGAGAAGCGCATTACCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCGAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCt                                                                                                      <  1:467626/149‑1 (MQ=255)                                                     gCCATTCCAGTTTGTCGTTCTGCTCCACTTCCGAGAAGCGCATTACCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAGTTTCGTTCCACTCTGAACCCGCCACCTGCCAg                                                                                                 >  1:63284/1‑149 (MQ=255)                                                         ttCTAGTTTGTCGTTCGGCTCCACTTCCGAGAAGCGCATTACCGTCCACGATTTTGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCtt                                                                                             <  2:209767/149‑1 (MQ=255)                                                         ttCCAGTTTGTCGTTCTGCTCCACTTCCGAGAAGCGCATTACCGTCCACGATTTGGCGCTTAAATCTTTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCtt                                                                                             >  1:283824/1‑149 (MQ=255)                                                                     gTTCTGCTCCACTTCCGAGAAGCGCATTACCGTCCACGATTTGGCGCTTAAATCATTGGGGGTGTCGTACACCCCAATGTTATTGCCGACGGTACCCCGAATGTCGTTCAACTCTGAACACGCCACCTGACAGACTTTACAGCCGacac                                                                                 >  2:55592/1‑149 (MQ=255)                                                                       tCTGCTCCACTTCCGAGAAGCGCATTACCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAg                                                                               <  2:32692/149‑1 (MQ=255)                                                                         tGCCCCACTTCCGAGAAGCGCATTACCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAggt                                                                             <  2:285248/149‑1 (MQ=255)                                                                              cACTTCCGAGAAGCGCATTACCGTCCACGATTTGGCGCTTAAATCCTTGGGGTTGTCGTACACCCCCATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACCCGCCACATGACAGGCTTTACAGCCGAAACAGGTGGCaa                                                                        >  2:217305/1‑149 (MQ=255)                                                                              cACTTCCGAGAAGCGCATTACCGTCCACGATTTGGCGCTTAAATCATTGGGGTTTTCGTACACCCCAATGTTATTCCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGACTTTACAGCCGGTACAagtgtgaa                                                                        >  2:223252/1‑145 (MQ=255)                                                                              cACTTCCGAGAAGCGCATTACCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTaa                                                                        >  1:570510/1‑149 (MQ=255)                                                                                 ttCCGAGAAGCGCATTACCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCCCTGTTATTACCGACGGTATCGCGAATGTCGTTCCACTCTGCACACGCCACCTGACAGGCTTTCCAGCCGCTACAGGTGGTAACGt                                                                     >  1:281142/1‑149 (MQ=255)                                                                                 ttCCGAGAAGCGCATTACCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGt                                                                     >  2:555500/1‑149 (MQ=255)                                                                                    cGAGAATCGCATTATCTTGCATGATTTGGCGTTTAAATCACTGGAGTAGCAGTACTTTCAAATGATATTGCCGACGGTATCGCGAATGTCGTTTCACGCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGa                                                                  <  1:277487/149‑1 (MQ=18)                                                                                    cGAGAAGCGCATTACCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGa                                                                  <  2:570510/149‑1 (MQ=255)                                                                                    cGAGAAGCGCATTACCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGa                                                                  >  1:450913/1‑149 (MQ=255)                                                                                     gagaAGCGCATTACCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATAACGGTGGTAACCTCAAt                                                                 >  2:413040/1‑149 (MQ=255)                                                                                          gcgcATTACCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTCCAGCCGATACAGGTGGTAAGGTCGATGAGtt                                                            >  2:561066/1‑149 (MQ=255)                                                                                           cgcATTGCCGTCCACGATTTGGCGCTTAAATCATTGGGGTGGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGttt                                                           <  2:700466/149‑1 (MQ=255)                                                                                           cgcATTACCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGttt                                                           <  2:699907/149‑1 (MQ=255)                                                                                              aTTACCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACTTCGATGAGTTTCGc                                                        >  1:477299/1‑149 (MQ=255)                                                                                                   cGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCActt                                                   >  1:447144/1‑149 (MQ=255)                                                                                                        aCGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTcc                                              >  2:532388/1‑149 (MQ=255)                                                                                                        aCGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTcc                                              >  1:217755/1‑149 (MQ=255)                                                                                                         tgttttGGCGCCTAAATCATTGGTGTTGTCGTTCGCCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCCCTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACATCGATGAGTTTCGCCACTTCTTCCt                                             <  2:228498/146‑1 (MQ=37)                                                                                                          gATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTg                                            <  1:222704/149‑1 (MQ=255)                                                                                                             ttGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTCATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGaa                                         <  1:707241/149‑1 (MQ=255)                                                                                                                  gcTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGGTTCGCCACTTCTTCCTGGAAATccc                                    >  1:76828/1‑149 (MQ=255)                                                                                                                    ttAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCcgc                                  <  1:532388/149‑1 (MQ=255)                                                                                                                     tAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCcgcg                                 >  2:444667/1‑149 (MQ=255)                                                                                                                           aTTGGGGTTGTCGTACTCCCCAATGTTATTGCCGACGGTATCGCGAAGCTCATTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAg                           <  1:55592/149‑1 (MQ=255)                                                                                                                                 gTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCTCCTGAGGCGCgg                     >  1:619030/1‑149 (MQ=255)                                                                                                                                   tGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCgggg                   <  2:450913/149‑1 (MQ=255)                                                                                                                                   tGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCGTTCCAGCCGATACAGGTGGTAACGTCGATGAGTTTCGTCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCgggg                   <  2:263/149‑1 (MQ=255)                                                                                                                                    gTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTTACAGGCTTTACAGCCGATACAGGTGATAACGTCGATGAGTTTCTCAACTTCTTCCTGGAAGTCCCCCGCCTGAGGCGCggggg                  >  2:196058/1‑149 (MQ=37)                                                                                                                                     tCGTACCCCCCATTGGTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGt                 <  2:469913/149‑1 (MQ=255)                                                                                                                                     tCGTACCCCCCAATTTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGt                 <  1:417124/149‑1 (MQ=255)                                                                                                                                     tCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGCCCCGCGCCTCAGGCGCgggact                 <  2:19401/149‑4 (MQ=255)                                                                                                                                          cacCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGAc            <  2:452892/149‑1 (MQ=255)                                                                                                                                             cccAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCACACGCCTGCGGCCAGGCGGCCAGCCCGt         >  2:204663/1‑149 (MQ=25)                                                                                                                                                aaTGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAg      >  1:640059/1‑149 (MQ=255)                                                                                                                                                    ttATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGGCAGACCGTTAGTcgc  >  1:368681/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                     GCTTTCAGGCAGCCTGGATCGGAACAGTGCATACAGCCGTCTTTGCGGATCAGCCATTCCAGTTTGTCGTTCTGCTCCACTTCCGAGAAGCGCATTACCGTCCACGATTTGGCGCTTAAATCATTGGGGTTGTCGTACACCCCAATGTTATTGCCGACGGTATCGCGAATGTCGTTCCACTCTGAACACGCCACCTGACAGGCTTTACAGCCGATACAGGTGGTAACGTCGATGAGTTTCGCCACTTCTTCCTGGAAGTCCCGCGCCTGAGGCGCGGGGGTCAGACCGTTAGTCGC  >  NC_000913_3_pae_tpiA/4082428‑4082723

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.