New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_pae_tpiA 3908513 =141 (1.140)20 (0.170) 17/250 11.7 13.0% intergenic (‑147/+36) pstB/pstA phosphate ABC transporter ATPase/phosphate ABC transporter permease
?NC_000913_3_pae_tpiA 4314206 = 133 (1.120)intergenic (+93/+54) yjdP/phnP putative periplasmic protein/5‑phospho‑alpha‑D‑ribosyl 1,2‑cyclic phosphate phosphodiesterase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 145 total aligned reads displayed.

CGGCAACTGGAGGATGAAGAGCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGCCACGCATCAAACTGGTGGCTGAT  >  NC_000913_3_pae_tpiA/4314063‑4314352
                                                                                                                                               |                                                                                                                                                   
 ggCAACTGGAGGATGAAGAGCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCctct                                                                                                                                              <  4:497731/150‑1 (MQ=255)
  gCAACTGGAGGATGAAGAGCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTg                                                                                                                                             <  2:303161/150‑1 (MQ=255)
  gCAACTGGAGGATGAAGAGCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTg                                                                                                                                             >  1:148192/1‑150 (MQ=255)
  gCAACTGGAGGATGAAGAGCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGCCCCCTCGCACCTCTg                                                                                                                                             >  3:321585/1‑150 (MQ=255)
     aCTGGAGGATGAAGAGCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCTccccagagggg                                                                                                                                          <  4:274935/150‑8 (MQ=255)
      caggaggaTGAAGAGCGGAGAATGGAAGATGAGTATGGGAGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGga                                                                                                                                         <  2:579050/148‑1 (MQ=255)
         gaggaTGAAGAGCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGagag                                                                                                                                      >  1:1008619/1‑150 (MQ=255)
             aTGAAGAGCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGtt                                                                                                                                  <  1:926466/150‑1 (MQ=255)
                aaGAGCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAgg                                                                                                                               <  3:453213/150‑1 (MQ=255)
                aaGAGCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAgg                                                                                                                               <  2:148192/150‑1 (MQ=255)
                 agagCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAggg                                                                                                                              >  4:331455/1‑150 (MQ=255)
                   agCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTg                                                                                                                            <  2:49771/150‑1 (MQ=255)
                     cGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAg                                                                                                                          >  2:622881/1‑150 (MQ=255)
                      ggAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAgg                                                                                                                         <  1:672981/150‑1 (MQ=255)
                       gagaATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAgg                                                                                                                               >  3:567983/1‑143 (MQ=255)
                        agaATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAgggg                                                                                                                       <  1:2257/150‑1 (MQ=255)
                            tGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGCGAAAACGAGCGCAATATGCAATATCGAGCACAATCGGTGCCCGCGCCCCTCTGGGGAGCGCGCTAGGGTGAGGGGGCCa                                                                                                                   >  1:1155775/1‑150 (MQ=255)
                            tGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAgggga                                                                                                                                  >  2:389650/1‑133 (MQ=255)
                            tGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAgggga                                                                                                                                  <  1:389650/135‑3 (MQ=255)
                             ggAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGgaga                                                                                                                                       >  1:435339/1‑129 (MQ=255)
                               aaGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAgcg                                                                                                                >  1:341852/1‑150 (MQ=255)
                                ggATGAGTGTGGGTGATGGGGTTGGGGATGAGGGAGGCATCGGCCCTCAGCCCAATGGGGAGGGGGAGAAAACGAGCGCAATATGCAATATCGAGCACAATCGGTCCCCTCGCCCGTCTGGGGAGAGGGTTAGGGGGAGGGGGCCAgcg‑c                                                                                                              <  4:624137/149‑1 (MQ=37)
                                         tGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTcc                                                                                                     <  2:112401/150‑1 (MQ=255)
                                           ggCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCct                                                                                                   <  3:385408/150‑1 (MQ=255)
                                             cGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCctcc                                                                                                 >  2:1393023/1‑149 (MQ=255)
                                              gATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCtctc                                                                                                <  1:189265/150‑1 (MQ=255)
                                                    gTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCct                                                                                                   <  3:91085/141‑1 (MQ=255)
                                                     tttggTATGGAGCAGGCATCGCGCCTTACCCCAATGTGTATAATGTAAATTCTAATTGAATACTTAAGATCGATCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCACGc                                                                                         <  1:500639/147‑1 (MQ=16)
                                                       gggTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTa                                                                                                                                 >  4:538283/1‑109 (MQ=255)
                                                       gggTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTa                                                                                                                                 <  3:538283/109‑1 (MQ=255)
                                                         gTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTgg                                                                                                                                            <  3:589622/96‑1 (MQ=255)
                                                         gTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTgg                                                                                                                                            >  4:589622/1‑96 (MQ=255)
                                                          tATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCACGCCAccc                                                                                    >  3:617205/1‑150 (MQ=255)
                                                          tATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCACGCCAccc                                                                                    >  4:819926/1‑150 (MQ=255)
                                                             ggAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCACGCCACCCCaa                                                                                 >  1:1125223/1‑150 (MQ=255)
                                                              gAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTa                                                                                                                                 <  2:975039/102‑1 (MQ=255)
                                                              gAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTa                                                                                                                                 >  1:975039/1‑102 (MQ=255)
                                                               aGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGc                                                                                                                                                    <  2:19783/82‑1 (MQ=255)
                                                               aGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCACGCCACCCCAAtc                                                                               >  3:535756/1‑150 (MQ=255)
                                                               aGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCACGCCACCCCAAtc                                                                               <  1:1357800/150‑1 (MQ=255)
                                                               aGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCACGCCACCCCAAt                                                                                <  2:1077553/149‑1 (MQ=255)
                                                               aGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCACGCCACCCCAAt                                                                                >  1:1077553/1‑149 (MQ=255)
                                                                gCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTggg                                                                                                                                           <  3:154198/90‑1 (MQ=255)
                                                                    gttttctcccTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCACGCCACCCCAATCTccat                                                                          >  1:1398896/8‑150 (MQ=255)
                                                                    gCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGc                                                                                                                     <  1:1421079/108‑1 (MQ=255)
                                                                    gCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGc                                                                                                                     >  2:1421079/1‑108 (MQ=255)
                                                                        cGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCACGCCAGCCCAATCTccatccca                                                                      <  2:740635/150‑1 (MQ=255)
                                                                        cGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCACGCCACCCCAATCTccatccca                                                                      <  1:30262/150‑1 (MQ=255)
                                                                             cTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCaaa                                                                 >  2:344727/1‑150 (MQ=255)
                                                                              tCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAAc                                                                <  1:344727/150‑1 (MQ=255)
                                                                                  cccAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCaaa                                                                 >  1:1075521/1‑145 (MQ=255)
                                                                                  cccAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCaaa                                                                 <  2:1075521/145‑1 (MQ=255)
                                                                                  cccAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCa                                                            >  2:917463/1‑150 (MQ=255)
                                                                                   ccAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCAc                                                           >  3:195607/1‑150 (MQ=255)
                                                                                     aaTGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCt                                                         <  2:1141222/150‑1 (MQ=255)
                                                                                     aaTGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCt                                                         >  1:1372087/1‑150 (MQ=255)
                                                                                          ggagagggagaAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCaaa                                                     >  1:1391649/1‑149 (MQ=255)
                                                                                          ggagagggagaAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGACGCTTCGGGTTAGTGTTCC‑GCGTCGCAGTTTCGCGTTCAGCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAAc                                                    >  3:173890/1‑150 (MQ=255)
                                                                                           gagagggagaAAACGAGCGCAATATTCAATATCGGGCACAATCGGTCCACTCGCCCCTCTGGGGAGAGGGTTAGGGGGAGGTGGCCAGCG‑CTCCCAGTACATCGCCACCACCCACACCGAGCGCCATCCCACCAATCCCCACCGCAAAcc                                                   <  2:1155775/150‑1 (MQ=255)
                                                                                                ggagaAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGga                                                                                                                                         >  1:1317520/1‑60 (MQ=255)
                                                                                                ggagaAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGga                                                                                                                                         <  2:1317520/60‑1 (MQ=255)
                                                                                                ggagaAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGGGGGGGCCAGCG‑CGAAGGTTGCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGAc                                              >  3:238254/1‑150 (MQ=39)
                                                                                                ggagaAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCctct                                                                                                 >  1:484874/1‑99 (MQ=255)
                                                                                                ggagaAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCctct                                                                                                 <  2:484874/99‑1 (MQ=255)
                                                                                                ggagaAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGAc                                              <  1:1324060/150‑1 (MQ=255)
                                                                                                ggagaAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGAc                                              >  2:554133/1‑150 (MQ=255)
                                                                                                  agaAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACgg                                            >  4:504491/1‑150 (MQ=255)
                                                                                                   gaAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGGTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGt                                           >  4:178753/1‑150 (MQ=255)
                                                                                                     aaaCGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTa                                          <  3:377764/149‑1 (MQ=255)
                                                                                                     aaaCGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTa                                          >  4:377764/1‑149 (MQ=255)
                                                                                                           gcgcAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGtt                                   <  1:622881/150‑1 (MQ=255)
                                                                                                            cgcAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGtt                                   <  3:631223/149‑1 (MQ=255)
                                                                                                            cgcAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGtt                                   >  4:631223/1‑149 (MQ=255)
                                                                                                             gcAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGtttt                                 <  1:1249506/150‑1 (MQ=255)
                                                                                                              cAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCAc                                                                                           <  4:492917/91‑1 (MQ=255)
                                                                                                               aaTATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTa                                                                                                                                 >  4:542855/1‑53 (MQ=255)
                                                                                                               aaTATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTcc                               <  2:783603/150‑1 (MQ=255)
                                                                                                               aaTATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTcc                               <  3:718490/150‑1 (MQ=255)
                                                                                                                  atTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATc                            >  1:850300/1‑150 (MQ=255)
                                                                                                                     cAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGc                         >  4:766799/1‑150 (MQ=255)
                                                                                                                           cGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAgg                                                                                                                               >  1:744816/1‑43 (MQ=255)
                                                                                                                           cGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAgg                                                                                                                               <  2:744816/43‑1 (MQ=255)
                                                                                                                           cGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGc                                                                                                                     >  1:844479/1‑53 (MQ=255)
                                                                                                                           cGACCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGc                                                                                                                     <  2:844479/53‑1 (MQ=255)
                                                                                                                             aGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGCCACGCATc                 <  2:1008619/150‑1 (MQ=255)
                                                                                                                              gCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGCCACGCATCa                >  4:602173/1‑150 (MQ=255)
                                                                                                                               cacaATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGCCACGCATCaa               <  3:819926/150‑1 (MQ=255)
                                                                                                                                  aaTCGGTCCCCTCGCCCCTCTTGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGCCACGCATCAAACt            <  2:13719/150‑1 (MQ=255)
                                                                                                                                  aaTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCctc                                                                                                  <  2:660610/64‑1 (MQ=255)
                                                                                                                                  aaTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGCCACGCATCAAACt            >  2:341247/1‑150 (MQ=255)
                                                                                                                                   aTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGCCACGCATCAAACtg           <  2:1372087/150‑1 (MQ=255)
                                                                                                                                     cctaacccTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCACGCCACACCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGCCACGCATCAAACtggt         >  2:131766/6‑150 (MQ=255)
                                                                                                                                     cGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGCCACGCATCAAACtggt         <  2:907799/150‑1 (MQ=255)
                                                                                                                                     cGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGCCACGCATCAAACtggt         <  2:1212068/150‑1 (MQ=255)
                                                                                                                                       gTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGCCACGCATCAAACtggtgg       >  1:619506/1‑150 (MQ=255)
                                                                                                                                           ccTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAAc                                                                <  1:402604/89‑1 (MQ=255)
                                                                                                                                           ccTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAAc                                                                >  2:402604/1‑89 (MQ=255)
                                                                                                                                            cTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCctc                                                                                                  >  1:1084425/1‑54 (MQ=255)
                                                                                                                                            cTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCctc                                                                                                  <  2:1084425/54‑1 (MQ=255)
                                                                                                                                            cTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGCCACGCATCAAACTGGTGGCTGat  >  3:464684/1‑150 (MQ=255)
                                                                                                                                               |                                                                                                                                                   
CGGCAACTGGAGGATGAAGAGCGGAGAATGGAAGATGAGTATGGGCGATGAGGTTGGGTATGGAGCAGGCATCGCCCCTCACCCCAATGGGGAGAGGGAGAAAACGAGCGCAATATTCAATATCGAGCACAATCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGGCCAGCG‑CGCACATTCCCTCTCATCACGCCACCCCAATCTCCATCCCATCAAACCCCACCTCAAACCCTGACGGTAGTGCGTTTTCCATCAGCCACGCATCAAACTGGTGGCTGAT  >  NC_000913_3_pae_tpiA/4314063‑4314352

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.