New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_pae_tpiA	4385264 =	58 (0.880)	4 (0.070)	4/260	8.9	6.5%	intergenic (+7/‑45)	yjeM/yjeN	putative transporter/uncharacterized protein
	?	NC_000913_3_pae_tpiA	4385291 =	61 (1.010)					intergenic (+34/‑18)	yjeM/yjeN	putative transporter/uncharacterized protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGCGCTGCAATTTTCTGCCGGGGATGTAGCGGAAATAGAGCAGACGATTCTCTCTTTTGTCGATGCCTGCCACACCCGTAAA  >  NC_000913_3_pae_tpiA/4385143‑4385437                                                                                                                                                     |                                                                                                                                                   ggACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCg                                                                                                                                                    >  1:743311/1‑149 (MQ=255) ggACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACCATAGGGCg                                                                                                                                                    >  2:314697/1‑149 (MQ=255)    caccacaTTGTGGATGGTTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGTGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTaa                                                                                                                                                 <  2:202528/146‑1 (MQ=255)        acaTTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGTGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGAc                                                                                                                                             >  2:222877/1‑149 (MQ=255)              tgGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGaaa                                                                                                                                       >  1:291251/1‑149 (MQ=255)                    gttGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTAGTGCAGCAGAGTGGCAAAAAAGCCGTAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTAt                                                                                                                                 <  2:571421/148‑1 (MQ=255)                        gtggtcttGTTTTTTTTTCGCTGTTAGTGATTGCGTTTTTCCAGAAGTATTGCAGCAGAGTGGCAAAAATTTCGCAGTGGGCGGTTGAATAACGTGGTTCTCTATCGTTTACCTGACGATAGGGCGTAAAGTCATGAAATGTTATGGAt                                                                                                                             <  2:1079551/142‑1 (MQ=255)                        gcggcCCTGTCTTCTTCTCGCTGTTAGGGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGAt                                                                                                                             <  2:801782/149‑1 (MQ=255)                           gcCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGac                                                                                                                          >  2:761799/1‑149 (MQ=255)                             ccTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGacac                                                                                                                        >  1:123990/1‑149 (MQ=255)                             ccTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGacac                                                                                                                        <  2:815813/149‑1 (MQ=255)                                gTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAg                                                                                                                     >  1:453457/1‑149 (MQ=255)                                    tcttctTGGTGTTAGCGATGGCCATTTTCCAGAAATATGGCAGCAGAGTGGCAAAAAATCCCCAGTGGGCGGTGGAATAAACCGCTGCCCTATCGGCTACCTGGCGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCgg                                                                                                                 <  1:960646/149‑1 (MQ=255)                                    tctcgtcGCTGTTCGCGATGGCGATTTACCAGAAATATTGGAGAAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGGTGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCgg                                                                                                                 <  2:267458/144‑1 (MQ=255)                                      ttctCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGa                                                                                                               <  2:810082/149‑1 (MQ=255)                                      tgctggCTGTTAGCTATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCTGTGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGa                                                                                                               <  2:806626/144‑1 (MQ=255)                                        ctcGCTGTTAGCGATGGCGATCTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAAt                                                                                                                                      <  2:401557/124‑1 (MQ=255)                                        ctcGCTGTTAGCGATGGCGATCTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAAt                                                                                                                                      >  1:401557/1‑124 (MQ=255)                                         tcGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGAccc                                                                                                            <  2:743311/149‑1 (MQ=255)                                                  gtgATGGCGGTTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAAc                                                                                                   <  2:104953/147‑1 (MQ=255)                                                      tGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGaa                                                                                               >  1:131936/1‑149 (MQ=255)                                                       ggCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAg                                                                                              >  1:160895/1‑149 (MQ=255)                                                          gATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGacac                                                                                                                        <  1:219294/120‑1 (MQ=255)                                                          gATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGacac                                                                                                                        >  2:219294/1‑120 (MQ=255)                                                          gATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATg                                                                                           >  1:1025464/1‑149 (MQ=255)                                                                ccAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCa                                                                                     >  1:408639/1‑149 (MQ=255)                                                                 tacgaCTATAGCAGGAGAGCTGCAAAAAAGCCGCAGGGGGCGGGGGAATAACCCGATTCCCTATTGTCTACCTGACGATAGGGCGTAAAGAGAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAg                                                                                    <  2:887950/145‑1 (MQ=255)                                                                  agcaCTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTCGAATAACCCGATGCCATATCGTCTCCCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAgg                                                                                   <  1:706457/146‑1 (MQ=255)                                                                  aGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACGGGAAATGTTATGGAGGACACCAGCCGGGACCCGGCAATAACCGAAGATGAATTCAgg                                                                                   >  2:191168/1‑149 (MQ=255)                                                                  aGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAgg                                                                                   <  2:160895/149‑1 (MQ=255)                                                                  aGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCATCTACGGTACGATAGGGCGTAAAGACAGGACTTGTTATCGATGACACCAGCCGGGACCCGGCACTAACCGAAGATGAAAGCAgg                                                                                   >  2:63019/1‑149 (MQ=255)                                                                               cagAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGCGCTGCAAtttt                                                                      <  2:291251/149‑1 (MQ=255)                                                                                 gagTGGCAAAAAATCCCCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGCGCTGCAATTTTCt                                                                    >  1:965469/1‑149 (MQ=255)                                                                                    tGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGAGCTGCACTTTTCTGcc                                                                 >  2:644691/1‑149 (MQ=255)                                                                                    tGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAAACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAACAACCGCAGACCAAATCAGGGCGCTCCAAtttcaccct                                                                 >  2:1060543/1‑143 (MQ=255)                                                                                     ggCAAAAAATCCGGAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGCGCTGCAATTTTCTGCCg                                                                <  2:580272/149‑1 (MQ=255)                                                                                      gCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGCAGATGAAATCAGGGCGATGCAATTTTCTGCCgt                                                               >  2:215636/1‑148 (MQ=255)                                                                                        aaaaaaTCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGAGCGCTGCAATTTTCTGCCgggg                                                             >  1:382483/1‑149 (MQ=255)                                                                                                    gTGGGCGGTGGAATAACCCGATGCCCCATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGCGCTGCAATTTTCTGCCGGGGATGTAGCGGaaa                                                 <  1:13776/149‑1 (MQ=255)                                                                                                             ggAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGCGCTGCAATTTTCTGCCGGGGATGTAGCGGAAATAGAGCAGa                                        <  1:222877/149‑1 (MQ=255)                                                                                                             ggAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGCGCTGCAATTTTCTGCCGGGGATGTAGCGGAAATAGAGCAGa                                        <  1:391464/149‑1 (MQ=255)                                                                                                               aaTAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGCGCTGCAATTTTCTGCCGGGGATGTAGCGGAAATAGAGCAGAc                                       <  2:964844/148‑1 (MQ=255)                                                                                                               aaTAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGCGCTGCAATTTTCTGCCGGGGATGTAGCGGAAATAGAGCAGAc                                       >  1:964844/1‑148 (MQ=255)                                                                                                               aaTAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGCGCTGCAATTTTCTGCCGGGGATGTAGCGGAAATAGAGCAGACg                                      >  1:76678/1‑149 (MQ=255)                                                                                                                aTAACCCGATGCCCCATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGCGCTGCAATTTTCTGCCGGGGATGTAGCGGAAATAGAGCAGACGa                                     <  1:100936/149‑1 (MQ=255)                                                                                                                  aaCCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGCGCTGCAATTTTCTGCCGGGGATGTAGCGGAAATAGAGCAGGCGAtt                                   >  1:184912/1‑149 (MQ=255)                                                                                                                  aaCCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGCGCTGCAATTTTCTGCCGGGGATGTAGCGGAAATAGAGCAGACGAtt                                   <  1:39922/149‑1 (MQ=255)                                                                                                                           ccttATCGTCTACCCGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACCCCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGCGCTGCAATTTTCTGCCGGGGATGTAGCGGAAATAGAGCAGACGATTCTCTCtttt                          <  2:1020511/146‑1 (MQ=255)                                                                                                                           cccTATGGTCGTCCTGACGAGAGGCCGTAAAGACAGGCACTGTTATGGATGCCACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGCGCTGCAATTTTCTGCCGGGGATGTAGCGGAAATAGAGCAGACGATTCTCTCtttt                          <  2:70314/149‑1 (MQ=255)                                                                                                                           cccTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGCGCTGCAATTTTCTGCCGGGGATGTAGCGGAAATAGAGCAGACGATTCTCTCtt                            >  1:603441/1‑147 (MQ=255)                                                                                                                           cccTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGCGCTGCAATTTTCTGCCGGGGATGTAGCGGAAATAGAGCAGACGATTCTCTCtt                            <  2:603441/147‑1 (MQ=255)                                                                                                                             cTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGCGCTGCAATTTTCTGCCGGGGATGTAGCGGAAATAGAGCAGACGATTCTCTCTTTTGt                        <  2:151563/149‑1 (MQ=255)                                                                                                                             cTATCGTCTACCCGACGATAGGGCGTAAAGACAGGAAATGTTATTGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGCGCTGCAATTTTCTGCCGGGGATGTAGCGGAAATAGAGCAGACGATTCTCTCTTTTGt                        <  1:82603/149‑1 (MQ=255)                                                                                                                              tATCGTCTACCGTACGATAGCGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATTAAATCAGGGCGCTGCAATTTTCTGCCGGGGATGTAGCGGAAATAGAGCAGACGATTCTCTCTTTTGTc                       <  1:25099/149‑1 (MQ=255)                                                                                                                                tCGGCTACCGGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGAGCCGGGATTTTTTGCCGGGGATGTAGCGGAAATAGAGCAGACGATTCTCTCTTTTGTCGa                     <  1:215232/149‑1 (MQ=255)                                                                                                                                ccGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGCGCTGCAAGTTTCTGCCGGGGATGTAGCGGAAATAGAGCAGACGATTCTCTCTTTTGTCGa                     <  1:215636/148‑1 (MQ=255)                                                                                                                                      aCCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGCCCCGGCAATAACCGAAGATGAAATCAGGGCGCTGCAATTTTCTGCCGGGGATGTAGCGGAAATAGAGCCGGCGATTCTCTCTTTTGTCGAggcctg               >  1:200637/1‑149 (MQ=255)                                                                                                                                       ccTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGCGCTGCAATTTTCTGCCGGGGATGTAGCGGAAATAGAGCAGACGATTCTCTCTTTTGTCGAtgcctgc              >  1:880761/1‑149 (MQ=255)                                                                                                                                       ccTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGCGCTGCAATTTTCTGCCGGGGATGTAGCGGAAATAGAGCAGACGATTCTCTCTTTTGTCGAtgcctgc              >  1:955550/1‑149 (MQ=255)                                                                                                                                        cTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCgg                                                                                                          >  2:554722/1‑56 (MQ=255)                                                                                                                                        cTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCgg                                                                                                          <  1:554722/56‑1 (MQ=255)                                                                                                                                           ctaaTAGGGCGTAAACAGCGGAAATGTTATGTATGACACCAGCAGGGACCCGGCAATAACCGAAGATGAAATCAGGGCGCTGCAATTTTCTGCCGGGGATGTAGCGGAAATAGAGCAGACGATTCTCTCTTTTGTCGATGCCTGCcaca          <  1:428284/146‑1 (MQ=255)                                                                                                                                                   gCGTAGAGACAGGAAATGTTATGGATGGCACCAGCCGGGAAGCGGCAGTAACCGAGGAGGAAATCAGGGCGCTGCAATTTGCTGGGGGGGATAGCGCGGGAATGGGTCAGAGGATTCTCTCTTTGGGCGATGCCTGCCACGCCCGTaag  >  2:835182/1‑148 (MQ=255)                                                                                                                                                   gCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGCGCTGCAATTTTCTGCCGGGGATGTAGCGGAAATAGAGCAGACGATTCTCACTTTTGTCGATGCCTGCCACACCCGTaaa  >  2:443156/1‑149 (MQ=255)                                                                                                                                                   gCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGCGCTGCAATTTTCTGCCGGGGATGTAGCGGAAATAGAGCAGACGATTATCTCTTTTGTCGATGCCTGCCACACCCGTaaa  <  1:545808/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                   GGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGCGCTGCAATTTTCTGCCGGGGATGTAGCGGAAATAGAGCAGACGATTCTCTCTTTTGTCGATGCCTGCCACACCCGTAAA  >  NC_000913_3_pae_tpiA/4385143‑4385437

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.