| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913_3_pae_tpiA | 1,362,060 | Δ228,509 bp | [puuR]–yneL | 223 genes [puuR], puuC, puuB, puuE, pspF, pspA, pspB, pspC, pspD, pspE, ycjM, ycjN, ycjO, ycjP, ycjQ, ycjR, ycjS, ycjT, ycjU, ycjV, ycjV, ompG, ycjW, ycjX, ycjF, tyrR, tpx, ycjG, mpaA, ymjC, ymjD, ycjY, pgrR, mppA, ynaI, insH1, ynaJ, uspE, fnr, ogt, abgT, abgB, abgA, abgR, mcaS, smrA, ydaM, ydaN, fnrS, dbpA, ttcA, intR, ydaQ, ydaC, ralR, recT, recE, racC, ydaE, kilR, sieB, ydaF, ydaG, racR, ydaS, ydaT, ydaU, ydaV, ydaW, rzpR, rzoR, trkG, ynaK, ydaY, tmpR, lomR, insH1, lomR, stfR, tfaR, pinR, ynaE, ttcC, uspF, ompN, micC, pfo, ydbJ, hslJ, ldhA, ydbH, ynbE, ydbL, feaR, feaB, tynA, paaZ, paaA, paaB, paaC, paaD, paaE, paaF, paaG, paaH, paaI, paaJ, paaK, paaX, paaY, ynbG, ydbA, insD1, insC1, ydbA, insI1, ydbA, ydbC, ydbD, ynbA, ynbB, ynbC, ynbD, azoR, hrpA, ydcF, aldA, gapC, gapC, cybB, rydC, ydcA, hokB, mokB, sokB, trg, ydcI, ydcJ, opgD, ydcH, rimL, ydcK, tehA, tehB, ydcL, insP, insQ, ydcO, ydcN, ydcP, yncJ, hicA, hicB, ydcR, ydcS, ydcT, ydcU, ydcV, patD, yncL, ydcX, ydcY, ydcZ, mnaT, curA, mcbR, yncD, yncE, ansP, yncG, yncH, rhsE, ydcD, yncI, yncI, ydcC, pptA, yddH, nhoA, yddE, narV, narW, narY, narZ, narU, yddK, yddK, yddL, yddG, fdnG, fdnH, fdnI, yddM, adhP, maeA, sra, bdm, osmC, ddpF, ddpD, ddpC, ddpB, ddpA, ddpX, dosP, dosC, yddW, gadC, gadB, pqqL, yddB, yddA, ydeM, ydeN, ydeO, safA, ydeP, ydeQ, ydeR, ydeS, ydeT, yneL, yneL |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913_3_pae_tpiA | 1362060 | 1590568 | 228509 | 61 [0] | [0] 61 | [puuR]–yneL | [puuR],puuC,puuB,puuE,pspF,pspA,pspB,pspC,pspD,pspE,ycjM,ycjN,ycjO,ycjP,ycjQ,ycjR,ycjS,ycjT,ycjU,ycjV,ycjV,ompG,ycjW,ycjX,ycjF,tyrR,tpx,ycjG,mpaA,ymjC,ymjD,ycjY,pgrR,mppA,ynaI,insH1,ynaJ,uspE,fnr,ogt,abgT,abgB,abgA,abgR,mcaS,smrA,ydaM,ydaN,fnrS,dbpA,ttcA,intR,ydaQ,ydaC,ralR,recT,recE,racC,ydaE,kilR,sieB,ydaF,ydaG,racR,ydaS,ydaT,ydaU,ydaV,ydaW,rzpR,rzoR,trkG,ynaK,ydaY,tmpR,lomR,insH1,lomR,stfR,tfaR,pinR,ynaE,ttcC,uspF,ompN,micC,pfo,ydbJ,hslJ,ldhA,ydbH,ynbE,ydbL,feaR,feaB,tynA,paaZ,paaA,paaB,paaC,paaD,paaE,paaF,paaG,paaH,paaI,paaJ,paaK,paaX,paaY,ynbG,ydbA,insD1,insC1,ydbA,insI1,ydbA,ydbC,ydbD,ynbA,ynbB,ynbC,ynbD,azoR,hrpA,ydcF,aldA,gapC,gapC,cybB,rydC,ydcA,hokB,mokB,sokB,trg,ydcI,ydcJ,opgD,ydcH,rimL,ydcK,tehA,tehB,ydcL,insP,insQ,ydcO,ydcN,ydcP,yncJ,hicA,hicB,ydcR,ydcS,ydcT,ydcU,ydcV,patD,yncL,ydcX,ydcY,ydcZ,mnaT,curA,mcbR,yncD,yncE,ansP,yncG,yncH,rhsE,ydcD,yncI,yncI,ydcC,pptA,yddH,nhoA,yddE,narV,narW,narY,narZ,narU,yddK,yddK,yddL,yddG,fdnG,fdnH,fdnI,yddM,adhP,maeA,sra,bdm,osmC,ddpF,ddpD,ddpC,ddpB,ddpA,ddpX,dosP,dosC,yddW,gadC,gadB,pqqL,yddB,yddA,ydeM,ydeN,ydeO,safA,ydeP,ydeQ,ydeR,ydeS,ydeT,yneL,yneL |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_pae_tpiA | = 1362059 | 0 (0.000) | 61 (0.950) | 47/276 | 0.3 | 100% | coding (149/558 nt) | puuR | repressor for the divergent puu operons, putrescine inducible |
| ? | NC_000913_3_pae_tpiA | 1590569 = | 0 (0.000) | intergenic (‑33/+285) | yneL/hipA | pseudogene, AraC family/inactivating GltX kinase facilitating persister formation; toxin of HipAB TA pair; autokinase | |||||
GTGATGAGGGACTGGCGCCAGGAAAACGCTTGTCGGAAATCCGCCAGCAGCAGGGGCTTTCACAACGTCGTGCCGCCGAACTCTCCGGGCTGACTCACAGTGCTATCAGTACGATAGAACAAGATAAAGTCAGCCCTGCCATCAGTACGCTGCAAAAGCTGCTGAAGGTGTATGGTCTGTCACTCTCGGAATTCTTTTCCGAGCCGGAAAAACCTGATGAGCCGCAGGTCGTCATTAATCAGGACGACTTAATTGAGATGGGTAGTCAGGGTGTGTCAATGAAGCTGGTT > NC_000913_3_pae_tpiA/1361915‑1362204 | gTGATGAGGGACTGGCGCCAGGAAAACGCTTGTCGGAAATCCGCCAGCAGCAGGGGCTTTCACAACGTCGTGCCGCCGAACTCTCCGGGCTGACTCACAGTGCTATCAGTACGATAGAACAAGATAAAGTCAGCCCTGCCATCAGcacc < 2:1059585‑M1/149‑5 (MQ=255) gaGGGACTGGCGCCAGGAAAACGCTTGTCGGAAATCCGCCAGCAGCAGGGGCTTTCACAACGTCGTGCCGCCGAACTCTCCGGGCTGACTCACAGTGCTATCAGTACGATAGAACAAGATAAAGTCAGCCCTGCCATCAGcaccctctg < 2:282872‑M1/149‑10 (MQ=255) gaGGGACTGGCGCCAGGAAAACGCTTGTCGGAAATCCGCCAGCAGCAGGGGCTTTCACAACGTCGTGCCGCCGAACTCTCCGGGCTGACGCACAGTGCTATCAGTACGATAGAACAAGATAAAGTCAGCCCTGCCATCAGcaccctctg < 2:357004‑M1/149‑10 (MQ=255) gggACTGGCGCCAGGAAAACGCTTGTCGGAAATCCGCCAGCAGCAGGGGCTTTCACAACGTCGTGCCGCCGAACTCTCCGGGCTGACTCACAGTGCTATCAGTACGATAGAACAAGATAAAGTCAGCCCTGCCATCAGcaccctctggt < 2:298426‑M1/149‑12 (MQ=255) ggCGCCAGGAAAACGCTTGTCGGAAATCCGCCAGCAGCAGGGGCTTTCACAACGTCGTGCCGCCGAACTCTCCGGGCTGACTCACAGTGCTATCAGTACGATAGAACAAGATAAAGTCAGCCCTGCCATCAGcaccctctggtgttttc < 1:70401‑M1/149‑18 (MQ=255) gcCAGGAAAACGCTTGTCGGAAATCCGCCAGCAGCAGGGGCTTTCACAACGTCGTGCCGCCGAACTCTCCGGGCTGACTCACAGTGCTATCAGTACGATAGAACAAGATAAAGTCAGCCCTGCCATCAGcaccctctggtgttttcgta > 1:927243‑M1/1‑129 (MQ=255) gcCAGGAAAACGCTTGTCGGAAATCCGCCAGCAGCAGGGGCTTTCACAACGTCGTGCCGCCGAACTATCCGGGCTGACTCACAGTGCTATCAGTACGATAGAACAAGATAAAGTCAGCCCTGCCATAAGcaccctctggtgttttcgta > 1:674208‑M1/1‑129 (MQ=255) aGGAAAACGCTTGTCGGAAATCCGCCAGCAGCAGGGGCTTTCACAACGTCGTGCCGCCGAACTCTCCGGGCTGACTCACAGTGCTATCAGTACGATAGAACAAGATAAAGTCAGCCCTGCCATCAGcaccctctggtgttttcgtatgc > 2:952995‑M1/1‑126 (MQ=255) aaCGCTTGTCGGAAATCCGCCAGCAGCAGGGGCTTTCACAACGTCGTGCCGCCGAACTCTCCGGGCTGACTCACAGTGGTATCAGTACGATAGAACAAGATAAAGTCAGCCCTGCCATCAGcaccctctggtgttttcgtatgcagtgt > 1:74942‑M1/1‑121 (MQ=255) aaCGCTTGGCGGAAATCCGCCAGCAGCAGGGGCTTTCACAACGTCGTGCCGCCGAACTCTCCGGGCTGACTCACAGTGCTATCAGTACGATAGAACAAGATAAAGTCAGCCCTGCCATCAGcaccctctggtgttttcgtatgcagtga < 2:1021616‑M1/149‑29 (MQ=255) cTTGTCGGAAATCCGCCAGCAGCAGGGGCTTTCACAACGTCGTGCCGCCGAACTCTCCGGGCTGACTCACAGTGCTATCAGTACGATAGAACAAGATAAAGTCAGCCCTGCCATCAGcaccctctggtgttttcgtatgcagtgtctat < 1:620536‑M1/149‑33 (MQ=255) agcagcagGGGCTTTCACAACGTCGTGCCGCCGAACTCTCCGGGCTGACTCACAGTGCTATCAGTACGATAGAACAAGATAAAGTCAGCCCTGCCATCAGcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgct < 1:191280‑M1/149‑50 (MQ=255) gcagGGGCTTTCACAACGTCGGGCCGCCGAACTCTCCGGGCTGACTCACAGTGCTATCAGTACGATAGAACAAGATAAAGTCAGCCCTGCCATCAGcaccctccgatatgtcatcgtgtggttgctatgcgacagacactgcgctctta < 1:544086‑M1/149‑54 (MQ=255) gggCTTTCACAACGTCGTGCCGCCGAACTCGCCGGGCTGACTCACCGTGCTATCAGTACGATAGAACAAGATAACGTCAGCCCTCCCATCAGcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcat < 1:975973‑M1/149‑58 (MQ=255) gCTTTCACAACGTCGTGCCGCCGAACTCTCCGGGCTGACTCACAGTGCTATCAGTACGATAGAACAAGATAAAGTCAGCCCTGCCATCAGcaccctctggt > 1:352820‑M1/1‑90 (MQ=255) gCTTTCACAACGTCGTGCCGCCGAACTCTCCGGGCTGACTCACAGTGCTATCAGTACGATAGAACAAGATAAAGTCAGCCCTGCCATCAGcaccctctggt < 2:352820‑M1/101‑12 (MQ=255) tttCACAACGTCGTGCCGCCGAACTCTCCGGGCTGACTCACAGTGCTATCAGTACGATAGAACAAGATAAAGTCAGCCCTGCCATCAGcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcatgggg < 1:961662‑M1/149‑62 (MQ=255) cacaACGTCGTGCCGCCGAACTCTCCGGGCTGACTCACAGTGCTATCAGTACGATAGAACAAGATAAAGTCAGCCCTGCCATCAGcaccctctggtgttttcgtatgcagtgtctatgcgacaggcactgcgctcttagcatggggcag > 1:202122‑M1/1‑85 (MQ=255) acaACGTCGTGCCGCCGAACTCTCCGGGCTGACTCACAGTGCTATCAGTACGATAGAACAAGATAAAGTCAGCCCTGCCATCAGcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcatggggcagg < 2:881839‑M1/149‑66 (MQ=255) aCGTCGTGCCGCCGAACTCGCCGGGCTGACTCACAGTGCTATCAGTACGATAGAACAAGATAAAGTCAGCCCTGCCATCAGcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcatggggcagggaa < 1:516847‑M1/149‑69 (MQ=255) tGCCGCCGAACTCTCCGGGCTGACTCACAGTGCTATCAGTACGATAGAACAAGATAAAGTCAGCCCTGCCATCAGcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcatggggcagggaataacca > 2:808036‑M1/1‑75 (MQ=255) ccgccgAATTCGCCGGGCTGACTCACAGTGCTATCCGTACGATAGAACAAGATAAAGTCAGCCCTGCCATCAGcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcatggggcagggaataaccagg < 1:331002‑M1/149‑77 (MQ=255) tctcCGGGCTGACTCACAGTGCTATCAGTACGATAGAACAAGATAAAGTCAGCCCTGCCATCAGcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcatggggcagggaataaccaggctatttctc > 1:887646‑M1/1‑64 (MQ=255) tctcCGGGCTGACTCACAGTGCTATCAGTACGATAGAACAAGATAAAGTCAGCCCTGCCATCAGcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcatggggcagggaataaccaggctatttctc > 1:154501‑M1/1‑64 (MQ=255) tctcCGGGCTGACTCACAGTGCTATCAGTACGATAGAACAAGATAAAGTCAGCCCTGCCATCAGcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcatggggcagggaataaccaggctatttctc > 1:953924‑M1/1‑64 (MQ=255) ctcCGGGCTGACTCACAGTGCTATCAGTACGATAGAACAAGATAAAGTCAGCCCTGCCATCAGcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcatggggcagggattcacgaggctatttctcc > 2:315212‑M1/1‑63 (MQ=255) ggatgacTCACAGTGCTATCAGTACGATAGAACAAGATAAAGTCAGCCCTGCCATCAGcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcatggggcagggaataaccaggctatttctccatgca < 1:922916‑M1/146‑92 (MQ=255) gCTGACTCACAGTGCTATCAGTACGATAGAACAAGATAAAGTCAGCCCTGCCATCAGcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcatggggcagggcataaccaggctatttctccatcccc > 1:315748‑M1/1‑57 (MQ=255) tCACAGTGCTATCAGTACGATAGAACAAGATAAAGTCAGCCCTGCCATCAGcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcatggggcagggaataaccaggctatttctccatgcacaggcca > 1:85157‑M1/1‑51 (MQ=255) tCACAGTGCTATCAGTACGATAGAACAAGATAAAGTCAGCCCTGCCATCAGcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcatggggcagggaataaccaggctatttctccatgcacaggcca > 1:447686‑M1/1‑51 (MQ=255) acaGTGCTATCAGTACGATAGAACAAGATAAAGTCAGCCCTGCCATCAGcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcatggggcagggaataaccaggctatttctccatgcacaggccaat > 2:191220‑M1/1‑49 (MQ=255) aGTGCTATCAGTACGATAGAACAAGATAAAGTCAGCCCTGCCATCAGcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcatggggcagggaataaccaggctatttctccatgcacaggccaatta > 1:616894‑M1/1‑47 (MQ=255) tGCTATCAGTACGATAGAACAAGATAAAGTCAGCCCTGCCATCAGcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcatggggcagggaataaccaggctatttctccatgcacaggccaattatg < 1:910396‑M1/149‑105 (MQ=255) ccatcAGTACGATAGAACAAGACAACGTCCGCCCTGACATCAGcaccatctggggttttcgtatgcagtgtctatgcgacagactctgcgctcttagcatggggcagggaataaccaggctatttctccatgcacaggccaattatgaa < 1:95385‑M1/147‑107 (MQ=255) tATCAGTACGATAGAACAAGATAAAGTCAGCCCTGCCATCAGcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcatggggcagggaataaccaggctatttctccatgcacaggccaattctgaaa > 2:396039‑M1/1‑42 (MQ=255) tATCAGTACGATAGAACAAGATAAAGTCAGCCCTGCCATCAGcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcatggggcagggaataaccaggctatttctccatgcacaggccaattatgaaa < 1:408387‑M1/149‑108 (MQ=255) aTCAGTACGATAGAACAAGATAAAGTCAGCCCTGCCATCAGcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcatggggcagggaataaccaggctatttctccatgcacaggccaattatgaaag > 2:27018‑M1/1‑41 (MQ=255) aTCAGTACGATAGAACAAGATAAAGTCAGCCCTGCCATCAGcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcat > 1:1036353‑M1/1‑41 (MQ=255) aTCAGTACGATAGAACAAGATAAAGTCAGCCCTGCCATCAGcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcat < 2:1036353‑M1/98‑58 (MQ=255) aTAGAACAAGATAAAGTCAGCCCTGCCATCAGcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcatggggcagggaataaccaggctatttctccatgcacaggccaattatgaaagaggagaggc < 2:447686‑M1/149‑118 (MQ=255) tAGAACAAGATAAAGTCAGCCCTGCCATCAGcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcatggggcagggaataaccaggctatttctccatgcacaggccaattatgaaagaggagaggct > 2:918392‑M1/1‑31 (MQ=255) aaaaccAGGTAAAGTCAGCCCTGCCATCAGcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcatggggcagggaataaccaggctatttacaatcggtgaggccaattatgaaagaggagaggctt < 2:793927‑M1/147‑120 (MQ=255) tcaAGATAAAGTCAGCCCGGCCGCCAGcaccctcttgtgttttcgtaggcagtgtctatgcgacagacactgcgctcttagcatggggcagggaataaccaggctatttctccatgcacaggccaattatgaaagaggagaggcttaag < 2:154501‑M1/148‑123 (MQ=255) aCAAGATAAAGTCAGCCCTGCCATCAGcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcatggggcagggaataaccaggctatttctccatgcacaggccaattatgaaagaggagaggcttaag > 1:407196‑M1/1‑27 (MQ=255) cAAGATAAAGTCAGCCCTGCCATCAGccccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcatggggcagggaataaccaggctatttctccatgcacaggccaattatgaaagtggagaggcttaagt > 2:1088886‑M1/1‑26 (MQ=255) aTAAAGTCAGCCCTGCCATCAGcaccctctggtgttttcgtatacagtgtctatgcgacagacactgcgctcttagcatggggcagggaataaccaggctatttctccatgcacaggccaattatgaaagaggagaggcttaagttctt > 2:859939‑M1/1‑22 (MQ=255) aGTCAGCCCTTCCAGCAGcaccctttggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcatggggcagggaataaccatgctattgctccatgcataggccaattatgaaagaggagaggcttaagttcttgaac < 2:453910‑M1/149‑132 (MQ=255) aGTCAGCCCTGCCATCAGcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcatggggcagggaataaccaggctatttctccatgcacaggccaattatga > 1:91975‑M1/1‑18 (MQ=255) aGTCAGCCCTGCCATCAGcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcatggggcagggaataaccaggctatttctccatgcacaggccaattatga < 2:91975‑M1/123‑106 (MQ=255) aGTCAGCCCTGCCATCAGcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcatggagcagggaataaccaggctatttctccatgcacaggccaattatgaaagaggagaggcttaagttcttgaac < 1:764986‑M1/149‑132 (MQ=255) gTCAGCCCTGCCATCAGcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcatggggcagggaataaccaggctatttctccatgcacaggccaattatgagaggggagaggcttaagttcttgaacc > 2:367592‑M1/1‑17 (MQ=255) gTCAGCCCTGCCATCAGcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcatggggcagggaataaccaggctatttctccatgcacaggccaattatgaaagaggagaggcttaagttcttgaacc > 2:986487‑M1/1‑17 (MQ=255) tCAGCCCTGCCATCAGccccctctggtggtttcgtatgcagtgtctatgcgactgacactgcgctcttagcatggggctgggaataaccaggctatttctccgtacacaggccaattatgaaagaggagaggcttaagttcttgaaccc > 2:620111‑M1/1‑16 (MQ=255) cAGCCCTGCCATCAGcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctattagcatggggcagggaataaccaggctatttctccatgcacaggccaattatgaaagaggagaggcttaagttcttgaaccct < 2:887646‑M1/149‑135 (MQ=255) cccTGCCATCAGcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcatggggcagggaataaccaggctatttctccatgcccaggccaactctgaaagaggagcgccttaagtccttgaaacctgaa > 2:624920‑M1/1‑12 (MQ=255) tGCCATCAGcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcatggggcagggaataaccaggctatttctccatgcacaggccaattatgaaa < 2:77449‑M1/116‑108 (MQ=255) tGCCATCAGcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcatggggcagggaataaccaggctatttctccatgcacaggccaattatgaaa > 1:77449‑M1/1‑9 (MQ=255) aTCAGcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcatggggcagggaataaccaggctatttctccatgcacaggccaattatgaaagaggagaggcttaagttcttgaaccctgaacgaataa > 1:1082927‑M1/1‑5 (MQ=255) aTCAGcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcatggggcagggaataaccaggctatttctccatgcacaggcaaattatgaaagaggagaggcttaagttcttgaaccctgaacgaataa > 1:583671‑M1/1‑5 (MQ=255) aTCAGcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcatggggcagggaataaccaggctatatctccatgcacaggccaattatgaaggaggagaggcttaagttcttgaaccctggacgaataa > 1:980507‑M1/1‑5 (MQ=255) tCAGcaccctctggtgttttcgtatgcagtgtctatgcgacagacactgcgctcttagcatggggcagggaataaccaggctatttctccatgcacaggccaattatgaaagaggagaggcttaagttcttgaaccctgaacgaataac > 1:744544‑M1/1‑4 (MQ=255) | GTGATGAGGGACTGGCGCCAGGAAAACGCTTGTCGGAAATCCGCCAGCAGCAGGGGCTTTCACAACGTCGTGCCGCCGAACTCTCCGGGCTGACTCACAGTGCTATCAGTACGATAGAACAAGATAAAGTCAGCCCTGCCATCAGTACGCTGCAAAAGCTGCTGAAGGTGTATGGTCTGTCACTCTCGGAATTCTTTTCCGAGCCGGAAAAACCTGATGAGCCGCAGGTCGTCATTAATCAGGACGACTTAATTGAGATGGGTAGTCAGGGTGTGTCAATGAAGCTGGTT > NC_000913_3_pae_tpiA/1361915‑1362204 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |