| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913_3_pae_tpiA | 1,362,060 | Δ228,509 bp | [puuR]–yneL | 223 genes [puuR], puuC, puuB, puuE, pspF, pspA, pspB, pspC, pspD, pspE, ycjM, ycjN, ycjO, ycjP, ycjQ, ycjR, ycjS, ycjT, ycjU, ycjV, ycjV, ompG, ycjW, ycjX, ycjF, tyrR, tpx, ycjG, mpaA, ymjC, ymjD, ycjY, pgrR, mppA, ynaI, insH1, ynaJ, uspE, fnr, ogt, abgT, abgB, abgA, abgR, mcaS, smrA, ydaM, ydaN, fnrS, dbpA, ttcA, intR, ydaQ, ydaC, ralR, recT, recE, racC, ydaE, kilR, sieB, ydaF, ydaG, racR, ydaS, ydaT, ydaU, ydaV, ydaW, rzpR, rzoR, trkG, ynaK, ydaY, tmpR, lomR, insH1, lomR, stfR, tfaR, pinR, ynaE, ttcC, uspF, ompN, micC, pfo, ydbJ, hslJ, ldhA, ydbH, ynbE, ydbL, feaR, feaB, tynA, paaZ, paaA, paaB, paaC, paaD, paaE, paaF, paaG, paaH, paaI, paaJ, paaK, paaX, paaY, ynbG, ydbA, insD1, insC1, ydbA, insI1, ydbA, ydbC, ydbD, ynbA, ynbB, ynbC, ynbD, azoR, hrpA, ydcF, aldA, gapC, gapC, cybB, rydC, ydcA, hokB, mokB, sokB, trg, ydcI, ydcJ, opgD, ydcH, rimL, ydcK, tehA, tehB, ydcL, insP, insQ, ydcO, ydcN, ydcP, yncJ, hicA, hicB, ydcR, ydcS, ydcT, ydcU, ydcV, patD, yncL, ydcX, ydcY, ydcZ, mnaT, curA, mcbR, yncD, yncE, ansP, yncG, yncH, rhsE, ydcD, yncI, yncI, ydcC, pptA, yddH, nhoA, yddE, narV, narW, narY, narZ, narU, yddK, yddK, yddL, yddG, fdnG, fdnH, fdnI, yddM, adhP, maeA, sra, bdm, osmC, ddpF, ddpD, ddpC, ddpB, ddpA, ddpX, dosP, dosC, yddW, gadC, gadB, pqqL, yddB, yddA, ydeM, ydeN, ydeO, safA, ydeP, ydeQ, ydeR, ydeS, ydeT, yneL, yneL |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913_3_pae_tpiA | 1362060 | 1590568 | 228509 | 61 [0] | [0] 61 | [puuR]–yneL | [puuR],puuC,puuB,puuE,pspF,pspA,pspB,pspC,pspD,pspE,ycjM,ycjN,ycjO,ycjP,ycjQ,ycjR,ycjS,ycjT,ycjU,ycjV,ycjV,ompG,ycjW,ycjX,ycjF,tyrR,tpx,ycjG,mpaA,ymjC,ymjD,ycjY,pgrR,mppA,ynaI,insH1,ynaJ,uspE,fnr,ogt,abgT,abgB,abgA,abgR,mcaS,smrA,ydaM,ydaN,fnrS,dbpA,ttcA,intR,ydaQ,ydaC,ralR,recT,recE,racC,ydaE,kilR,sieB,ydaF,ydaG,racR,ydaS,ydaT,ydaU,ydaV,ydaW,rzpR,rzoR,trkG,ynaK,ydaY,tmpR,lomR,insH1,lomR,stfR,tfaR,pinR,ynaE,ttcC,uspF,ompN,micC,pfo,ydbJ,hslJ,ldhA,ydbH,ynbE,ydbL,feaR,feaB,tynA,paaZ,paaA,paaB,paaC,paaD,paaE,paaF,paaG,paaH,paaI,paaJ,paaK,paaX,paaY,ynbG,ydbA,insD1,insC1,ydbA,insI1,ydbA,ydbC,ydbD,ynbA,ynbB,ynbC,ynbD,azoR,hrpA,ydcF,aldA,gapC,gapC,cybB,rydC,ydcA,hokB,mokB,sokB,trg,ydcI,ydcJ,opgD,ydcH,rimL,ydcK,tehA,tehB,ydcL,insP,insQ,ydcO,ydcN,ydcP,yncJ,hicA,hicB,ydcR,ydcS,ydcT,ydcU,ydcV,patD,yncL,ydcX,ydcY,ydcZ,mnaT,curA,mcbR,yncD,yncE,ansP,yncG,yncH,rhsE,ydcD,yncI,yncI,ydcC,pptA,yddH,nhoA,yddE,narV,narW,narY,narZ,narU,yddK,yddK,yddL,yddG,fdnG,fdnH,fdnI,yddM,adhP,maeA,sra,bdm,osmC,ddpF,ddpD,ddpC,ddpB,ddpA,ddpX,dosP,dosC,yddW,gadC,gadB,pqqL,yddB,yddA,ydeM,ydeN,ydeO,safA,ydeP,ydeQ,ydeR,ydeS,ydeT,yneL,yneL |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_pae_tpiA | = 1362059 | 0 (0.000) | 61 (0.950) | 47/276 | 0.3 | 100% | coding (149/558 nt) | puuR | repressor for the divergent puu operons, putrescine inducible |
| ? | NC_000913_3_pae_tpiA | 1590569 = | 0 (0.000) | intergenic (‑33/+285) | yneL/hipA | pseudogene, AraC family/inactivating GltX kinase facilitating persister formation; toxin of HipAB TA pair; autokinase | |||||
TAGCTTTCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTT‑‑TCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTTCTCCAT‑GCACAGGCCAATTATGAAAGAGGAGAGGCTTAAGTTCTTGAACCCTGAACGAATAAC > NC_000913_3_pae_tpiA/1590424‑1590713 | gtgatgagggactggcgccaggaaaacgcttgtcggaaatccgccagcagcaggggctttcacaacgtcgtgccgccgaactctccgggctgactcacagtgctatcagtacgatagaacaagataaagtcagccctgccatcagCAcc < 2:1059585‑M2/4‑1 (MQ=255) gagggactggcgccaggaaaacgcttgtcggaaatccgccagcagcaggggctttcacaacgtcgtgccgccgaactctccgggctgactcacagtgctatcagtacgatagaacaagataaagtcagccctgccatcagCACCCTCTg < 2:282872‑M2/9‑1 (MQ=255) gagggactggcgccaggaaaacgcttgtcggaaatccgccagcagcaggggctttcacaacgtcgtgccgccgaactctccgggctgacgcacagtgctatcagtacgatagaacaagataaagtcagccctgccatcagCACCCTCTg < 2:357004‑M2/9‑1 (MQ=255) gggactggcgccaggaaaacgcttgtcggaaatccgccagcagcaggggctttcacaacgtcgtgccgccgaactctccgggctgactcacagtgctatcagtacgatagaacaagataaagtcagccctgccatcagCACCCTCTGgt < 2:298426‑M2/11‑1 (MQ=255) ggcgccaggaaaacgcttgtcggaaatccgccagcagcaggggctttcacaacgtcgtgccgccgaactctccgggctgactcacagtgctatcagtacgatagaacaagataaagtcagccctgccatcagCACCCTCTGGTGTTT‑‑Tc < 1:70401‑M2/17‑1 (MQ=255) gccaggaaaacgcttgtcggaaatccgccagcagcaggggctttcacaacgtcgtgccgccgaactctccgggctgactcacagtgctatcagtacgatagaacaagataaagtcagccctgccatcagCACCCTCTGGTGTTT‑‑TCGTa > 1:927243‑M2/130‑149 (MQ=255) gccaggaaaacgcttgtcggaaatccgccagcagcaggggctttcacaacgtcgtgccgccgaactatccgggctgactcacagtgctatcagtacgatagaacaagataaagtcagccctgccataagCACCCTCTGGTGTTT‑‑TCGTa > 1:674208‑M2/130‑149 (MQ=255) aggaaaacgcttgtcggaaatccgccagcagcaggggctttcacaacgtcgtgccgccgaactctccgggctgactcacagtgctatcagtacgatagaacaagataaagtcagccctgccatcagCACCCTCTGGTGTTT‑‑TCGTATGc > 2:952995‑M2/127‑149 (MQ=255) aacgcttgtcggaaatccgccagcagcaggggctttcacaacgtcgtgccgccgaactctccgggctgactcacagtggtatcagtacgatagaacaagataaagtcagccctgccatcagCACCCTCTGGTGTTT‑‑TCGTATGCAgtgt > 1:74942‑M2/122‑149 (MQ=255) aacgcttggcggaaatccgccagcagcaggggctttcacaacgtcgtgccgccgaactctccgggctgactcacagtgctatcagtacgatagaacaagataaagtcagccctgccatcagCACCCTCTGGTGTTT‑‑TCGTATGCagtga < 2:1021616‑M2/28‑2 (MQ=255) cttgtcggaaatccgccagcagcaggggctttcacaacgtcgtgccgccgaactctccgggctgactcacagtgctatcagtacgatagaacaagataaagtcagccctgccatcagCACCCTCTGGTGTTT‑‑TCGTATGCAGTGTCTAt < 1:620536‑M2/32‑1 (MQ=255) agcagcaggggctttcacaacgtcgtgccgccgaactctccgggctgactcacagtgctatcagtacgatagaacaagataaagtcagccctgccatcagCACCCTCTGGTGTTT‑‑TCGTATGCAGTGTCTATGCGACAGACACTGCGct < 1:191280‑M2/49‑1 (MQ=255) gcaggggctttcacaacgtcgggccgccgaactctccgggctgactcacagtgctatcagtacgatagaacaagataaagtcagccctgccatcagCACCCTCCGATATGTCATCGTGTG‑‑GTTGCTATGCGACAGACACTGCGCTCTTa < 1:544086‑M2/53‑1 (MQ=255) gggctttcacaacgtcgtgccgccgaactcgccgggctgactcaccgtgctatcagtacgatagaacaagataacgtcagccctcccatcagCACCCTCTGGTGTTT‑‑TCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCAt < 1:975973‑M2/57‑1 (MQ=255) gctttcacaacgtcgtgccgccgaactctccgggctgactcacagtgctatcagtacgatagaacaagataaagtcagccctgccatcagCACCCTCTGgt > 1:352820‑M2/91‑101 (MQ=255) gctttcacaacgtcgtgccgccgaactctccgggctgactcacagtgctatcagtacgatagaacaagataaagtcagccctgccatcagCACCCTCTGgt < 2:352820‑M2/11‑1 (MQ=255) tttcacaacgtcgtgccgccgaactctccgggctgactcacagtgctatcagtacgatagaacaagataaagtcagccctgccatcagCACCCTCTGGTGTTT‑‑TCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATgggg < 1:961662‑M2/61‑1 (MQ=255) cacaacgtcgtgccgccgaactctccgggctgactcacagtgctatcagtacgatagaacaagataaagtcagccctgccatcagCACCCTCTGGTGTTT‑‑TCGTATGCAGTGTCTATGCGACAGGCACTGCGCTCTTAGCATGGGGCAg > 1:202122‑M2/86‑149 (MQ=255) acaacgtcgtgccgccgaactctccgggctgactcacagtgctatcagtacgatagaacaagataaagtcagccctgccatcagCACCCTCTGGTGTTT‑‑TCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAgg < 2:881839‑M2/65‑1 (MQ=255) acgtcgtgccgccgaactcgccgggctgactcacagtgctatcagtacgatagaacaagataaagtcagccctgccatcagCACCCTCTGGTGTTT‑‑TCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGaa < 1:516847‑M2/68‑1 (MQ=255) tgccgccgaactctccgggctgactcacagtgctatcagtacgatagaacaagataaagtcagccctgccatcagCACCCTCTGGTGTTT‑‑TCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCa > 2:808036‑M2/76‑149 (MQ=255) ccgccgaattcgccgggctgactcacagtgctatccgtacgatagaacaagataaagtcagccctgccatcagCACCCTCTGGTGTTT‑‑TCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAgg < 1:331002‑M2/76‑1 (MQ=255) tctccgggctgactcacagtgctatcagtacgatagaacaagataaagtcagccctgccatcagCACCCTCTGGTGTTT‑‑TCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTtctc > 1:887646‑M2/65‑149 (MQ=255) tctccgggctgactcacagtgctatcagtacgatagaacaagataaagtcagccctgccatcagCACCCTCTGGTGTTT‑‑TCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTtctc > 1:953924‑M2/65‑149 (MQ=255) tctccgggctgactcacagtgctatcagtacgatagaacaagataaagtcagccctgccatcagCACCCTCTGGTGTTT‑‑TCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTtctc > 1:154501‑M2/65‑149 (MQ=255) ctccgggctgactcacagtgctatcagtacgatagaacaagataaagtcagccctgccatcagCACCCTCTGGTGTTT‑‑TCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGATTCACGAGGCTATTTCTcc > 2:315212‑M2/64‑149 (MQ=255) ggatgactcacagtgctatcagtacgatagaacaagataaagtcagccctgccatcagCACCCTCTGGTGTTT‑‑TCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTTCTCCAT‑Gca < 1:922916‑M2/91‑1 (MQ=255) gctgactcacagtgctatcagtacgatagaacaagataaagtcagccctgccatcagCACCCTCTGGTGTTT‑‑TCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGCATAACCAGGCTATTTCtccatcccc > 1:315748‑M2/58‑145 (MQ=255) tcacagtgctatcagtacgatagaacaagataaagtcagccctgccatcagCACCCTCTGGTGTTT‑‑TCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTTCTCCAT‑GCACAGGCCa > 1:85157‑M2/52‑149 (MQ=255) tcacagtgctatcagtacgatagaacaagataaagtcagccctgccatcagCACCCTCTGGTGTTT‑‑TCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTTCTCCAT‑GCACAGGCCa > 1:447686‑M2/52‑149 (MQ=255) acagtgctatcagtacgatagaacaagataaagtcagccctgccatcagCACCCTCTGGTGTTT‑‑TCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTTCTCCAT‑GCACAGGCCAAt > 2:191220‑M2/50‑149 (MQ=255) agtgctatcagtacgatagaacaagataaagtcagccctgccatcagCACCCTCTGGTGTTT‑‑TCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTTCTCCAT‑GCACAGGCCAATTa > 1:616894‑M2/48‑149 (MQ=255) tgctatcagtacgatagaacaagataaagtcagccctgccatcagCACCCTCTGGTGTTT‑‑TCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTTCTCCAT‑GCACAGGCCAATTATg < 1:910396‑M2/104‑1 (MQ=255) ccatcagtacgatagaacaagacaacgtccgccctgacatcagCACCATCTGGGGTTT‑‑TCGTATGCAGTGTCTATGCGACAGACTCTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTTCTCCAT‑GCACAGGCCAATTATGaa < 1:95385‑M2/106‑1 (MQ=255) tatcagtacgatagaacaagataaagtcagccctgccatcagCACCCTCTGGTGTTT‑‑TCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTTCTCCAT‑GCACAGGCCAATTCTGaaa > 2:396039‑M2/43‑149 (MQ=255) tatcagtacgatagaacaagataaagtcagccctgccatcagCACCCTCTGGTGTTT‑‑TCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTTCTCCAT‑GCACAGGCCAATTATGaaa < 1:408387‑M2/107‑1 (MQ=255) atcagtacgatagaacaagataaagtcagccctgccatcagCACCCTCTGGTGTTT‑‑TCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCAt > 1:1036353‑M2/42‑98 (MQ=255) atcagtacgatagaacaagataaagtcagccctgccatcagCACCCTCTGGTGTTT‑‑TCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCAt < 2:1036353‑M2/57‑1 (MQ=255) atcagtacgatagaacaagataaagtcagccctgccatcagCACCCTCTGGTGTTT‑‑TCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTTCTCCAT‑GCACAGGCCAATTATGAAag > 2:27018‑M2/42‑149 (MQ=255) atagaacaagataaagtcagccctgccatcagCACCCTCTGGTGTTT‑‑TCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTTCTCCAT‑GCACAGGCCAATTATGAAAGAGGAGAGGc < 2:447686‑M2/117‑1 (MQ=255) tagaacaagataaagtcagccctgccatcagCACCCTCTGGTGTTT‑‑TCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTTCTCCAT‑GCACAGGCCAATTATGAAAGAGGAGAGGCt > 2:918392‑M2/32‑149 (MQ=255) aaaaccaggtaaagtcagccctgccatcagCACCCTCTGGTGTTT‑‑TCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTT‑ACAATCGGTGAGGCCAATTATGAAAGAGGAGAGGCtt < 2:793927‑M2/119‑1 (MQ=255) tcaagataaagtcagcccggccgccagCACCCTCTTGTGTTT‑‑TCGTAGGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTTCTCCAT‑GCACAGGCCAATTATGAAAGAGGAGAGGCTTAAg < 2:154501‑M2/122‑1 (MQ=255) acaagataaagtcagccctgccatcagCACCCTCTGGTGTTT‑‑TCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTTCTCCAT‑GCACAGGCCAATTATGAAAGAGGAGAGGCTTAAg > 1:407196‑M2/28‑149 (MQ=255) caagataaagtcagccctgccatcagCCCCCTCTGGTGTTT‑‑TCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTTCTCCAT‑GCACAGGCCAATTATGAAAGTGGAGAGGCTTAAGt > 2:1088886‑M2/27‑149 (MQ=255) ataaagtcagccctgccatcagCACCCTCTGGTGTTT‑‑TCGTATACAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTTCTCCAT‑GCACAGGCCAATTATGAAAGAGGAGAGGCTTAAGTTCtt > 2:859939‑M2/23‑149 (MQ=255) agtcagcccttccagcagCACCCTTTGGTGTTT‑‑TCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCATGCTATTGCTCCAT‑GCATAGGCCAATTATGAAAGAGGAGAGGCTTAAGTTCTTGAAc < 2:453910‑M2/131‑1 (MQ=255) agtcagccctgccatcagCACCCTCTGGTGTTT‑‑TCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTTCTCCAT‑GCACAGGCCAATTATGa > 1:91975‑M2/19‑123 (MQ=255) agtcagccctgccatcagCACCCTCTGGTGTTT‑‑TCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTTCTCCAT‑GCACAGGCCAATTATGa < 2:91975‑M2/105‑1 (MQ=255) agtcagccctgccatcagCACCCTCTGGTGTTT‑‑TCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGAGCAGGGAATAACCAGGCTATTTCTCCAT‑GCACAGGCCAATTATGAAAGAGGAGAGGCTTAAGTTCTTGAAc < 1:764986‑M2/131‑1 (MQ=255) gtcagccctgccatcagCACCCTCTGGTGTTT‑‑TCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTTCTCCAT‑GCACAGGCCAATTATGAGAGGGGAGAGGCTTAAGTTCTTGAAcc > 2:367592‑M2/18‑149 (MQ=255) gtcagccctgccatcagCACCCTCTGGTGTTT‑‑TCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTTCTCCAT‑GCACAGGCCAATTATGAAAGAGGAGAGGCTTAAGTTCTTGAAcc > 2:986487‑M2/18‑149 (MQ=255) tcagccctgccatcagCCCCCTCTGGTGGTT‑‑TCGTATGCAGTGTCTATGCGACTGACACTGCGCTCTTAGCATGGGGCTGGGAATAACCAGGCTATTTCTCCGT‑ACACAGGCCAATTATGAAAGAGGAGAGGCTTAAGTTCTTGAAccc > 2:620111‑M2/17‑149 (MQ=255) cagccctgccatcagCACCCTCTGGTGTTT‑‑TCGTATGCAGTGTCTATGCGACAGACACTGCGCTATTAGCATGGGGCAGGGAATAACCAGGCTATTTCTCCAT‑GCACAGGCCAATTATGAAAGAGGAGAGGCTTAAGTTCTTGAACCCt < 2:887646‑M2/134‑1 (MQ=255) ccctgccatcagCACCCTCTGGTGTTT‑‑TCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTTCTCCAT‑GCCCAGGCCAACTCTGAAAGAGGAGCGCCTTAAGTCCTTGAAACCTGaa > 2:624920‑M2/13‑149 (MQ=255) tgccatcagCACCCTCTGGTGTTT‑‑TCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTTCTCCAT‑GCACAGGCCAATTATGaaa < 2:77449‑M2/107‑1 (MQ=255) tgccatcagCACCCTCTGGTGTTT‑‑TCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTTCTCCAT‑GCACAGGCCAATTATGaaa > 1:77449‑M2/10‑116 (MQ=255) atcagCACCCTCTGGTGTTT‑‑TCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTTCTCCAT‑GCACAGGCCAATTATGAAAGAGGAGAGGCTTAAGTTCTTGAACCCTGAACGAATaa > 1:1082927‑M2/6‑149 (MQ=255) atcagCACCCTCTGGTGTTT‑‑TCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTTCTCCAT‑GCACAGGCAAATTATGAAAGAGGAGAGGCTTAAGTTCTTGAACCCTGAACGAATaa > 1:583671‑M2/6‑149 (MQ=255) atcagCACCCTCTGGTGTTT‑‑TCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATATCTCCAT‑GCACAGGCCAATTATGAAGGAGGAGAGGCTTAAGTTCTTGAACCCTGGACGAATaa > 1:980507‑M2/6‑149 (MQ=255) tcagCACCCTCTGGTGTTT‑‑TCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTTCTCCAT‑GCACAGGCCAATTATGAAAGAGGAGAGGCTTAAGTTCTTGAACCCTGAACGAATAAc > 1:744544‑M2/5‑149 (MQ=255) | TAGCTTTCGTAACCGACAGCATAGGCTGCTGTGGTGACATCGTAATGTTCATTCAGCATCTGTCGCCTGACTTCATTGAGACGTAGCCATTTCTGATACCGGAGTGGACTCATTCCCGCTTGATCCGTCCTTAAATAAGTAACAGCACCCTCTGGTGTTT‑‑TCGTATGCAGTGTCTATGCGACAGACACTGCGCTCTTAGCATGGGGCAGGGAATAACCAGGCTATTTCTCCAT‑GCACAGGCCAATTATGAAAGAGGAGAGGCTTAAGTTCTTGAACCCTGAACGAATAAC > NC_000913_3_pae_tpiA/1590424‑1590713 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |