New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_pae_tpiA 1263650 =116 (1.110)59 (0.580) 44/276 2.9 34.0% intergenic (‑150/‑64) lolB/hemA lipoprotein localization factor/glutamyl tRNA reductase
?NC_000913_3_pae_tpiA = 1263818 116 (1.140)coding (105/1257 nt) hemA glutamyl tRNA reductase

Only 100 of 186 total aligned reads displayed.

GCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGACATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAAGAGGCGTTAATCCGCTGGCTTTGCGATTATCACAATCTTAATGAAGAAGATCTGCG  >  NC_000913_3_pae_tpiA/1263669‑1263967
                                                                                                                                                     |                                                                                                                                                     
gCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGACATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTg                                                                                                                                                       <  1:1009781/150‑1 (MQ=255)
gCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGACATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTg                                                                                                                                                       <  3:126045/150‑1 (MQ=255)
  aaGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGACATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGct                                                                                                                                                     <  1:899093‑M2/150‑3 (MQ=255)
  aaGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGACATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGct                                                                                                                                                     >  2:1010267‑M2/1‑148 (MQ=255)
   aGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGACATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGctt                                                                                                                                                    >  4:503070‑M2/1‑147 (MQ=255)
    gCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGACATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGctta                                                                                                                                                   <  1:409268‑M2/150‑5 (MQ=255)
            tcccTATCAACGTTGGTATTATCCCCCGCAGCCATGCCCCTTTTAGCGCTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCg                                                                                                                                           <  2:521793/149‑1 (MQ=255)
             cccTATCAACGTTGGTATTATTTCCCGCAGACATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGa                                                                                                                                          >  1:915369/1‑150 (MQ=255)
                 aTCAACGTTGGTATTATTTCCCGCAGACATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGt                                                                                                                                      >  3:340016/1‑150 (MQ=255)
                     aCGTTGGTATTATTTCCCGCAGACATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAg                                                                                                                                  >  4:57800/1‑150 (MQ=255)
                      cGTTGGTATTATTTCCCGCAGACATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGcttacgcatcctgtatgatgca                                                                                                                                 >  3:258507‑M2/1‑128 (MQ=255)
                       gTTGGTATTATTTCCCGCAGACATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGcttacgcatcctgtatgatgcaa                                                                                                                                >  1:959040‑M2/1‑127 (MQ=255)
                           gTATTATTTCCCGCAGACATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGggcggc                                                                                                                            >  1:108732/1‑150 (MQ=255)
                            tattatTTCCCGCAGACATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGcttacgcatcctgtatgatgcaagcaga                                                                                                                           >  1:343775‑M2/1‑122 (MQ=255)
                            tattatTTCCCGCAGACATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGgcggcg                                                                                                                           >  1:475565/1‑150 (MQ=255)
                              ttattTCCCGCAGACATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCgtg                                                                                                                         <  4:628262/150‑1 (MQ=255)
                                 tttCCCGCAGACATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCgtggtg                                                                                                                      <  3:203608/150‑1 (MQ=255)
                                 tttCCCGCAGACATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCgtggtg                                                                                                                      >  4:499860/1‑150 (MQ=255)
                                  ttCCCGCAGACATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGcttacgcagcctgtatgatgcaagcagactaacc                                                                                                                     <  3:664901‑M2/150‑35 (MQ=255)
                                      cGCAGACATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGGTGTTGCGGGGCCACGCGGTGccttc                                                                                                                 >  4:519452/1‑146 (MQ=255)
                                              tGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCa                                                                                                         <  4:14664/150‑1 (MQ=255)
                                               gACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCaa                                                                                                        >  1:445433/1‑150 (MQ=255)
                                                aCCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTAACGCCGCGAGAACGTGTATCGTTTTCGCCAGATAAGCTCGATCAGGCGCTTGACAGCCTGcttacgcatcctgtatgatgcaagcagactaaccctatcaacgttggt                                                                                                       <  2:74305‑M2/150‑49 (MQ=255)
                                                 cccTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGcttacgcatcctgtatgatgcaagcagactaaccctatcaacgttggta                                                                                                      >  3:297764‑M2/1‑101 (MQ=255)
                                                  ccTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACCCCCAGgttttgcatcctgtatgatgcaagcagactaaccctatcaacgttggtat                                                                                                     >  3:688579‑M2/1‑100 (MQ=255)
                                                   cTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGc                                                                                                    >  3:498839/1‑150 (MQ=255)
                                                     tttAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGcttacgcatcctgtatgatgcaagcagactaaccctatcaacgttggtattat                                                                                                  >  3:101888‑M2/1‑97 (MQ=255)
                                                        aGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGa                                                                                               <  2:486626/150‑1 (MQ=255)
                                                        aGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGa                                                                                               <  2:172829/150‑1 (MQ=255)
                                                           aCTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGcttacgcatcctgtatgatg                                                                                                                                   <  4:474291‑M2/111‑21 (MQ=255)
                                                             tCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGNTGCTGTCGACGTGCAACCGCACGGAACttt                                                                                          >  1:560331/1‑150 (MQ=255)
                                                                gTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATc                                                                                       >  1:547380/1‑150 (MQ=255)
                                                                   tCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTa                                                                                    <  1:932834/150‑1 (MQ=255)
                                                                   tCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTa                                                                                    <  1:1092837/150‑1 (MQ=255)
                                                                     aaCCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGc                                                                                  >  3:487445/1‑150 (MQ=255)
                                                                      aCCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGcc                                                                                                                                            >  1:739577/1‑91 (MQ=255)
                                                                      aCCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGcc                                                                                                                                            <  2:739577/91‑1 (MQ=255)
                                                                       ccATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGt                                                                                >  3:546499/1‑150 (MQ=255)
                                                                        cATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGtt                                                                               <  2:954352/150‑1 (MQ=255)
                                                                          tAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCg                                                                                                                <  2:403751/115‑1 (MQ=255)
                                                                          tAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGa                                                                             >  4:640832/1‑150 (MQ=255)
                                                                                ggCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGAGCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGCGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCa                                                                       >  2:235154/1‑150 (MQ=255)
                                                                                  cACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAgg                                                                     <  1:527617/150‑1 (MQ=255)
                                                                                    ccTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGcttacgcatcctgtatgatgcaagcagactaaccctatcaacgttggtattatttcccgcagacatgacccttttagcactcgg                                                                   <  2:126274‑M2/150‑85 (MQ=255)
                                                                                    ccTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGAc                                                                   >  3:396284/1‑150 (MQ=255)
                                                                                     cTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACa                                                                  <  2:668993/150‑1 (MQ=255)
                                                                                       gTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAAc                                                                >  3:629472/1‑150 (MQ=255)
                                                                                        tATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAAcc                                                               >  1:301661/1‑150 (MQ=255)
                                                                                          tCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGcttacgcatcctgtatgatgcaagcagactaaccctatcaacgttggtattatttcccgcagacat                                                                                     <  3:601532‑M2/126‑67 (MQ=255)
                                                                                          tCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGcttacgcatcctgtatgatgcaagcagactaaccctatcaacgttggtattatttcccgcagacat                                                                                     >  4:601532‑M2/1‑60 (MQ=255)
                                                                                           cGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGc                                                            <  2:704502/150‑1 (MQ=255)
                                                                                            gCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCa                                                           >  1:591811/1‑150 (MQ=255)
                                                                                             cTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGcttacgcatcctgtatgatgcaagcagactaaccctatcaacgttggtattatttcccgcagacatgacccttttagcactcggtatcaacca                                                          >  1:126274‑M2/1‑57 (MQ=255)
                                                                                               gCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAaga                                                        <  2:409268/150‑1 (MQ=255)
                                                                                               gCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAaga                                                        <  2:281625/150‑1 (MQ=255)
                                                                                               gCGAGAACGTGTATCGTTGTCGCCGGATAAGCGCGAGCGGGCGCTTGACAGCCTGCTTGCGCATCCGATGGTGCAGGGCGGCGTGGGGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAaga                                                        <  3:30673/150‑1 (MQ=255)
                                                                                                 gagaACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAAGAgg                                                      >  1:189492/1‑150 (MQ=255)
                                                                                                    aaCGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGcttacgcatcctgtatgatgcaagcagactaaccctatcaacgttggtattatttcccgcagacatgacccttttagcactcggtatcaaccataaaacg                                                   >  1:74305‑M2/1‑50 (MQ=255)
                                                                                                    aaCGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAAGAGGCGt                                                   <  1:1013411/150‑1 (MQ=255)
                                                                                                             cGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAAGAGGCGTTAATCCGCt                                          <  2:1117101/150‑1 (MQ=255)
                                                                                                              gTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAAGAGGCGTTAATCCGCTg                                         >  4:201168/1‑150 (MQ=255)
                                                                                                               ttttCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAAGAGGCGTTAATCCGCTgg                                        >  1:310946/1‑150 (MQ=255)
                                                                                                                   cGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAAGAGGCGTTAATCCGCTGGCttt                                    >  1:838793/1‑150 (MQ=255)
                                                                                                                    gCCGGATAAGCTCGATCCGGCGCTCGCCAGTCTGcttacggttcatgcgtgaggcaatccgattaaccctatcaacgttggtattatttcccgcagacatgacccttttagcactcggtatcaaccataaaacggcacctgtatcgctgc                                   >  3:97956‑M2/1‑34 (MQ=255)
                                                                                                                    gCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGcttacgcatcctgtatgatgcaagcagactaaccctatcaacgttggtattatttcccgcagacatgacccttttagcactcggtatcaaccataaaacggcacctgtatcgctgc                                   <  3:642569‑M2/150‑117 (MQ=255)
                                                                                                                    gCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAAGAGGCGTTAATCCGCTGGCttt                                    <  1:261989/149‑1 (MQ=255)
                                                                                                                    gCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAAGAGGCGTTAATCCGCTGGCttt                                    >  2:261989/1‑149 (MQ=255)
                                                                                                                    gCCGGATAAGCTCGATCAGGCGCTTGACAACCTGCTTGCGCAGCCGATGGTGCAGGGCTGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTGGAAGAGCAGGACAACCTGCAAGAGGCGTTAATCCGCTGGCTTTg                                   >  2:1089045/1‑150 (MQ=255)
                                                                                                                      cGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAAGAGGCGTTAATCCGCTGGCTTTGCg                                 >  2:1027656/1‑150 (MQ=255)
                                                                                                                       ggATAAGCTCGATCAGGCGCTTGACAGCCTGcttacgcatcctgtatgatgcaagcagactaaccctatcaacgttggtattatttcccgcagacatgacccttttagcgctcggtatcaaccataaaacggcacctgtatcgctgcgag                                <  1:535184‑M2/150‑120 (MQ=255)
                                                                                                                          tAAGCTCGATCAGGCGCTTGACAGCCTGcttacgcatcctgtatgatgcaagcagactaaccctatcaacgttggtattatttcccgcagacatgacccttttagcactcggtatcaaccataaaacggcacctgtatcgctgcgagaac                             <  2:358606‑M2/150‑123 (MQ=255)
                                                                                                                          tAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAAGAGGCGTTAATCCGCTGGCTTTGCGATTa                             <  2:412515/150‑1 (MQ=255)
                                                                                                                            aGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAAGAGGCGTTAATCCGCTGGCTTTGCGATTATc                           <  2:341091/150‑1 (MQ=255)
                                                                                                                             gCTCGATCAGGCGCTTGACAGCCTGcttacgcatcctgtatgatgcaagcagactaaccctatcaacgttggtattatttcccgcagacatgacccttttagcactcgg                                                                   >  1:416312‑M2/1‑25 (MQ=255)
                                                                                                                             gCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAAGAGGCGTTAATCCGCTGGCTTTGCGATTAGca                          >  1:504916/1‑150 (MQ=255)
                                                                                                                              cTCGATCAGGCGCTTGACAGCCTGcttacgcatcctgtatgatgcaagcagactaaccctatcaacgttggtattatttcccgcagacatgacccttttagcactcggtatcaaccataaaacggcacctgtatcgctgcgagaacgtgt                         <  1:668993‑M2/150‑127 (MQ=255)
                                                                                                                              cTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAAGAGGCGTTAATCCGCTGGCTTTGCGATTATcac                         >  3:328356/1‑150 (MQ=255)
                                                                                                                              cTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAAGAGGCGTTAATCCGCTGGCTTTGCGATTATcac                         >  2:465869/1‑150 (MQ=255)
                                                                                                                               tCGATCAGGCGCTTGACAGCCTGcttacgcatcctgtatgatgcaagcagactaaccctatcaacgttggtattatttcccgcagacatgacccttttagcactcggtatcaaccataaaacggcacctgtatcgctgcgagaacgtgta                        <  1:218696‑M2/150‑128 (MQ=255)
                                                                                                                               tCGATCAGGCGCTTGACAGCCTGcttacgcatcctgtatgatgcaagcagactaaccctatcaacgttggtattatttcccgcagacatgacccttttagcactcggtatcaaccataaaac                                                    <  2:456159‑M2/122‑100 (MQ=255)
                                                                                                                               tCGATCAGGCGCTTGACAGCCTGcttacgcatcctgtatgatgcaagcagactaaccctatcaacgttggtattatttcccgcagacatgacccttttagcactcggtatcaaccataaaac                                                    >  1:456159‑M2/1‑23 (MQ=255)
                                                                                                                               tCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAaga                                                        <  1:950609/118‑1 (MQ=255)
                                                                                                                               tCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAAGAGGCGTTAATCCGCTGGCTTTGCGATTATcaca                        <  2:902358/150‑1 (MQ=255)
                                                                                                                               tCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAAGAGGCGTTAATCCGCTGGCTTTGCGATTATcaca                        >  2:332120/1‑150 (MQ=255)
                                                                                                                                 gATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCa                                                                                                                                   >  3:162034/1‑41 (MQ=255)
                                                                                                                                 gATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCa                                                                                                                                   <  4:162034/41‑1 (MQ=255)
                                                                                                                                   tCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAAGAGGCGTTAATCCGCTGGCTTTGCGATTATCACAATCt                    <  3:134879/150‑1 (MQ=255)
                                                                                                                                    cAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAAGAGGCGTTAATCCGCTGGCTTTGCGATTATCACAATCtt                   <  4:664901/150‑1 (MQ=255)
                                                                                                                                    cAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAAGAGGCGTTAATCCGCTGGCTTTGCGATTATCACAATCtt                   <  1:801592/150‑1 (MQ=255)
                                                                                                                                       gcgcTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAAGAGGCGTTAATCCGCTGGCTTTGCGATTATCACAATCTTAAt                <  1:723532/150‑1 (MQ=255)
                                                                                                                                         gcTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAAGAGGCGTTAATCCGCTGGCTTTGCGATTATCACAATCTTAATga              <  4:340016/150‑1 (MQ=255)
                                                                                                                                             gACAGCCTGcttacgcatcctgtatgatgcaagcagactaaccctatcaacgttggtattatttcccgcagacatgacccttttagcactcggtatcaaccataaaacggcacctgtatcgctgcgagaacgtgtatcgttttcgccgga          <  4:141103‑M2/150‑142 (MQ=255)
                                                                                                                                             gACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGAAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAAGAGGCGTTAATCCGCTGGCTTTGCGATTATCACAATCTTAATgaagaa          <  2:534988/150‑1 (MQ=255)
                                                                                                                                              aCAGCCTGcttacgcatcctgtatgatgcaagcagactaaccctatcaacgttggtattatttcccgcagacatgacccttttagcactcggtatc                                                               <  4:242110‑M2/96‑89 (MQ=255)
                                                                                                                                              aCAGCCTGcttacgcatcctgtatgatgcaagcagactaaccctatcaacgttggtattatttcccgcagacatgacccttttagaactcggtatcaaccataaaacggcacctgtatcgctgcgagaacgtgtatcgttttcgccggat         <  3:507059‑M2/150‑143 (MQ=255)
                                                                                                                                                  ccTGcttacgcatcctgtatgatgcaagcagactaaccctatcaacgttggtattatttcccgcagacatgacccttttagcactcggtatcaaccataaaacggcacctgtatcgctgcgagaacgtgtatcgttttcgccggataagc     <  1:1007239‑M2/150‑147 (MQ=255)
                                                                                                                                                  ccTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAAGAGGCGTTAATCCGCTGGCTTTGCGATTATCACAATCTTAATGAAGAAGATCt     >  1:390609/1‑150 (MQ=255)
                                                                                                                                                   cTGcttacgcatcctgtatgatgcaagcagactaaccctatcaacgttggtattatttcccgcagaca                                                                                      >  3:468789‑M2/1‑3 (MQ=255)
                                                                                                                                                    tGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAAGAGGCGTTAATCCGNTGGCTTNGCGATTATCNCAATCTTAATGAAGAAGATCTGc   <  2:560331/150‑1 (MQ=255)
                                                                                                                                                     gCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAAGAGGCGTTAATCCGCTGGCTTTGCGATTATCACAATCTTAATGAAGAAGATCTGCg  >  2:695878/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
GCAAGCAGACTAACCCTATCAACGTTGGTATTATTTCCCGCAGACATGACCCTTTTAGCACTCGGTATCAACCATAAAACGGCACCTGTATCGCTGCGAGAACGTGTATCGTTTTCGCCGGATAAGCTCGATCAGGCGCTTGACAGCCTGCTTGCGCAGCCGATGGTGCAGGGCGGCGTGGTGCTGTCGACGTGCAACCGCACGGAACTTTATCTTAGCGTTGAAGAGCAGGACAACCTGCAAGAGGCGTTAATCCGCTGGCTTTGCGATTATCACAATCTTAATGAAGAAGATCTGCG  >  NC_000913_3_pae_tpiA/1263669‑1263967

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.