New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_pae_tpiA	349375 =	55 (0.990)	5 (0.090)	4/270	7.2	8.0%	coding (694/891 nt)	prpB	2‑methylisocitrate lyase
	?	NC_000913_3_pae_tpiA	349410 =	62 (1.180)					coding (729/891 nt)	prpB	2‑methylisocitrate lyase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CATGTACCGCCAGTTTGCCGATGCGGTGCAGGTGCCGATCCTCGCCAACATCACCGAATTTGGTGCCACGCCGCTGTTTACCACCGACGAATTACGCAGCGCCCATGTCGCAATGGCGCTGTACCCACTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTACAACGTCCTGCGCCAGGAAGGCACGCAGAAAAGCGTCATCGACACCATGCAGACCCGCAACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTA  >  NC_000913_3_pae_tpiA/349263‑349558                                                                                                                                                    |                                                                                                                                                     cATGTACCGCCAGTTTGCCGATGCGGTGCAGGTGCCGATCCTCGCCAACATCACCGAATTTGGTGCCACGCCGCTGTTTACCACCGACGAATTACGCAGCGCCCATGTCGCAATGGCGCTGTACCCACTTTCAGCGTTCCGCGCCATGa                                                                                                                                                     >  1:747712/1‑149 (MQ=255)   tGTACCGCCAGTGTGCCGATGCGGTGCAGGTGCCGAACCTCGCCAACATAACCGAATTTGGTGCCACGCCCCTGTTTACCACCGACGAATTACGCGTCGACCATGACGCAATGGCGCTGTACCCACTTTCAGCGTGCCGCACCAGGaca                                                                                                                                                   >  2:502476/1‑147 (MQ=255)                  ccGATGCGGTGCAGGTGCCGATCCTCGCCAACATCACCGAATTTGGTGCCACGCCGCTGTTTACCACCGACGAATTACGCAGCGCCCATGTCGCAATGGCGCTGTACCCACTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACAt                                                                                                                                    <  2:82947/149‑1 (MQ=255)                   cGATGCGGTGCAGGTGCCGATCCTCGCCAACATCCCCGCAGCTGGTGCCACGCCGCTGTTTACCACCGACGAATTACGCAGCGCCCATGTCGCAATGGCGCTGTACCCACTTTCAGCGTTCCGCGCCATGAACCGCGCCCCTGAACATg                                                                                                                                   >  2:417041/1‑149 (MQ=255)                     aTGCGGTGCAGGTGCCGATCCTCGCCAACATCACCGAATTTGGTGCCACGCCGCTGTTTACCACCGACGAATTACGCAGCGCCCATGTCGCAATGGCGCTGTACCCACTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTc                                                                                                                                 <  1:425780/149‑1 (MQ=255)                         ggTGCAGGTGCCGATCCTCGCCAACATCACCGAATTTGGTGCCACGCCGCTGTTTACCACCGACGAATTACGCAGCGCCCATGTCGCAATGGCGCTGTACCCACTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTACa                                                                                                                             >  1:133567/1‑149 (MQ=255)                              aGGTGCCGATCCTCGCCAACATCACCGAATTGTGTGTCACGCCGCTGTTTACCACCGACGAATTACGCAGCGCCCATGTCGCAATGGCGCTGTACCCACTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTACAACGTc                                                                                                                        <  1:451539/149‑1 (MQ=255)                               ggTGCCGATCCTCGCCAACATCACCGAATTTGGTGCCACGCCGCTGTTTACCACCGACGAATTACGCAGCGCCCATGTCGCAATGGCGCTGTACCCACTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTACAACGTcc                                                                                                                       <  2:133567/149‑1 (MQ=255)                                gTGCCGATCCTCGCCAACATCACCGAATTTGGTGCCACGCCGCTGTTTACCACCGACGAATTACGCAGCGCCCATGTCGCAATGGCGCTGTACCCACTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTa                                                                                                                               >  1:85610/1‑140 (MQ=255)                                gTGCCGATCCTCGCCAACATCACCGAATTTGGTGCCACGCCGCTGTTTACCACCGACGAATTACGCAGCGCCCATGTCGCAATGGCGCTGTACCCACTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTa                                                                                                                               <  2:85610/140‑1 (MQ=255)                                  gCCGATCCTCGCCAACATCACCGAATTTGGTGCCACGCCGCTGTTTACCACCGACGAATTACGCAGCGCCCATGTCGCAATGGCGCTGTACCCACTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTACAACGTCCTgc                                                                                                                    >  1:338341/1‑149 (MQ=255)                                    cGATCCTCGCCAACATCACCGAATTTGGTGCCACGCCGCTGTTTACCACCGACGAATTACGCAGCGCCCATATCGCAATGGCGCTGTACCCACTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTACAACGTCCTgcgc                                                                                                                  >  2:488052/1‑149 (MQ=255)                                          tCGCCAACATGACCGAATTTGGTGCCACGCCGCTGTTTACCACCGACGAATTACGCAGCGCCCAGGTCGCCTGGGCGATGTACCCACTTTCAGCGTTCCGCGCCATGAACCGCGCGGCTGAACATGTCTACAACGTCCTGCGCCAGGaa                                                                                                            <  2:248671/149‑1 (MQ=255)                                          tCGCCAACATCACCGAATTTGGTGCCACGCCGCTGTTTACCACCGACGAATTACGCAGCGCCCATGTCGCAATGGCGCTGTACCCACTTTCAGCGTTCCGCGCCATGaa                                                                                                                                                    >  2:552972/1‑109 (MQ=255)                                          tCGCCAACATCACCGAATTTGGTGCCACGCCGCTGTTTACCACCGACGAATTACGCAGCGCCCATGTCGCAATGGCGCTGTACCCACTTTCAGCGTTCCGCGCCATGaa                                                                                                                                                    <  1:552972/109‑1 (MQ=255)                                          tCGCCAACATCACCGAATTTGGTGCCACGCCGCTGTTTACCACCGACGAATTACGCAGCGCCCATGTCGCAATGGCGCTGTACCCACTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTACAACGTCCTGCGCCAGGag                                                                                                            >  1:78983/1‑148 (MQ=255)                                          tCGCCAACATCACCGAATTTGGTGCCACGCCGCTGTTTACCACCGACGAATTACGCAGCGCCCATGTCGCAATGGCGCTGTACCCACTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCGACAACGTCCTGCGCCAGGaa                                                                                                            >  1:133869/1‑149 (MQ=255)                                                      cctaaTTTGGTGCCACGCCGCTGGTGACCACCGACGAATTACGCAGCGCCCATGTCGCAATGGCGCTGTACCCACTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTAAACATGTCTACAACGTCCTGCGCCGGGAAGGCACGCAGaaa                                                                                                <  2:279557/146‑1 (MQ=255)                                                      ccGAATTTGGTGCCACGCCGCTGTTTACCACCGACGAATTACGCAGCGCCCATGTCGCAATGGCGCTGTACCCACTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTACAACGTCCTGCGCCAGGAAGGCACGCAGaaa                                                                                                >  2:589429/1‑149 (MQ=255)                                                      ccGAATTTGGTGCCACGCCGCTGTTTACCACCGACGAATTACGCAGCGCCCATGTCGCAATGGCGCTGTACCCACTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTACAACGTCCTGCCCCAGAAAGGCACGCCGaaa                                                                                                >  2:255630/1‑149 (MQ=255)                                                         aaTTTGGTGCCACGCCGCTGTTTACCACCGACGAATTACGCAGCGCCCATGTCGCAATGGCGCTGTACCCACTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTACAACGTCCTGCGCCAGGAAGGCACGCAGAAAAGc                                                                                             <  1:274530/149‑1 (MQ=255)                                                                  ccACGCCGCTGTTTACCACCGACTAATTACGCAGCGCCCATGGCGCAATGGCGCTGTACCCACTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTACAACGTCCTCCGCCCACAAGCCCCGCAGACAAGCGTCATCCac                                                                                    >  2:132174/1‑149 (MQ=255)                                                                  ccACGCCGCTGTTTACCACCGACGAATTACGCAGCGCCCATGTCGCAATGGCGCTGTACCCACTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTACAACGTCCTGCGCCAGGAAGGCACGCAGAAAAGCGTCATCGac                                                                                    <  1:344787/149‑1 (MQ=255)                                                                    aCGCCGCTGTTTACCACCGACGAATTACGCAGCGCCCATGTCGCAATGGCGCTGTACCCACTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTACAACGTCCTGCGCCAGGAAGGCACGCAGAAAAGCGTCATCGacac                                                                                  <  1:226472/149‑1 (MQ=255)                                                                    aCGCCGCTGTTTACAACCGACGAATTACGCAGCGCCCATGTCGCAATGGCGCTGTACCCACTTCGAGCGTTCCGCGCCATGAACCGCGCCGCTGCACCTGTCTACCACGTCCTGCGCCAAGAAGGCACGCCGAAACGCGTCATCCacac                                                                                  >  2:204323/1‑149 (MQ=255)                                                                          cTGTTTACCACCGACGAATTACGCAGCGCCCATGTCGCAATGGCGCTGTACCCACTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTACAACGTCCTGCGCCAGGAAGGCACGCAGAAAAGCGTCATCGACACCATGCa                                                                            <  1:401714/149‑1 (MQ=255)                                                                           tGTTTACCACCGACGAATTACGCAGCGCCCATGTCGCAATGGCGCTGTACCCACTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTACAACGTCCTGCGCCAGGCAGGCACGCCGAGAAGCGTCATCGACACCcagcag                                                                           >  1:767760/1‑149 (MQ=255)                                                                             tttACCACCGACGAATTACGCAGCGCCCATGTCGCAATGGCGCTGTACCCACTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTACCACGGCCTGCGCCAGGAAGGCACGCAGAAAAGCGTCCTCGCCACCATGCCGAc                                                                         >  2:95144/1‑149 (MQ=255)                                                                                  caccGACGAATTACGCAGCGCCCATGTCGCAATGGCGCTGTACCCACTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTACAACGTCCTGCGCCAGGAAGGCACGCAGAAAAGCGTCATCGACCCCATGCAGACCCGCa                                                                    >  1:880262/1‑149 (MQ=255)                                                                                  caccGACGAATTACGCAGCGCCCATGTCGCAATGGCGCTGTACCCACTTTCAGCGTTCAGCGCCATAAACCGCGCCGCTGAACATGTCTACAAAGTCCTGCGCCAGAAACGCACGCACAAAAGCGTCATCGACACCATGCAGACCCGCa                                                                    >  2:456696/1‑149 (MQ=255)                                                                                   accGACGAATTACGCAGCGCCCATGTCGCAATGGCGCTGTACCCACTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTACAACGTCCTGCGCCCGGAAGGCACGCAGAAAAGCGTCCTCGACACCATGCAGCCCCGCac                                                                   >  2:280642/1‑148 (MQ=255)                                                                                   accGACGAATTACGCAGCGCCCATGTCGCAATGGCGCTGTACCCACTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTACAACGTCCTGCGCCAGGAAGGCACGCAGAAAAGCGTCATCGACACCATGCAGACCCGCaa                                                                   >  2:733819/1‑149 (MQ=255)                                                                                   accGACGAATTACGCAGCGCCCATGTCGCAATGGCGCTGTACCCACTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTACAACGTCCTGCGCCAGGAAGGCACGCAGAAAAGCGTCATCGACACCATCCAGACCCGCaa                                                                   >  2:308872/1‑149 (MQ=255)                                                                                     cgacgaATTACGCAGCGCCCATGTCGCAATGGCGCTGTACCCACTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTACAACGTCCTGCGCCAGGAAGGCACGCAGAAAAGCGTCATCGACACCATGCAGACCCGCAACg                                                                 >  1:610972/1‑149 (MQ=255)                                                                                     cgacgaATTACGCAGCGCCCATGTCGCAATGGCGCTGTACCCACTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTACAACGTCCTGCGCCAGGAAGGCACGCAGAAAAGCGTCATCGACACCATGCAGACCCGCAACg                                                                 >  1:561973/1‑149 (MQ=255)                                                                                     cgacgaATTACGCAGCGCCCATGTCGCAATGGCGCTGTACCCACTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTACAACGTCCTGCGCCAGGAAGGCACGCAGAAAAGCGTCATCGACACCATGCAGACCCGCAACg                                                                 >  2:692583/1‑149 (MQ=255)                                                                                            ttACGCAGCGCCCATGTCGCAATGGCGCTGTACCCACTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTACAACGTCCTGCGCCAGGAAGGCACGCAGAAAAGCGTCATCGACACCATGCAGACCCGCAACGAGCTGTa                                                          >  1:493122/1‑149 (MQ=255)                                                                                                 cAGCGCCCATGTCGCAATGGCGCTGTACCCACTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTACAACGTCCTGCGCCAGGAAGGCACGCAGAAAAGCGTCATCGACACCATGCAGACCCGCAACGAGCTGTACGaaa                                                     <  2:493122/149‑1 (MQ=255)                                                                                                    cgcCCATGTCGCAATGGCGCTGTACCCACTTTCAGCGTTCCGCGCCATGAACCGTGCCGCTGAACATGTCTACAACGTCCTGCGCCAGGAAGGCACGCAGAAAAGCGTCATCGACACCATGCAGACCCGCAACGAGCTGTACGAAAGCa                                                  <  2:747712/149‑1 (MQ=255)                                                                                                      cgattgtgGCAATGGCGCGGTACCCACTTTCAGCGTTCGGCGCCATGAACCGCGCCGCTGAACATGTCTCCTACGTCCTTTGCGAGGAAGGCACGCAGAAAGGCGTCATCGACACCATGCAGTCTCGCATCGCGCTGTACGAAAGCATc                                                <  2:14726/145‑1 (MQ=255)                                                                                                       ccATGTCGCAATGGCGCTGTACCCACTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTACAACGTCCTGCGCCAGGAAGGCACGCAGAAAAGCGTCATCGACACCATGCAGACCCGCACCGAGCTGTAAGAACGCATCa                                               >  1:384735/1‑149 (MQ=255)                                                                                                       ccATGTCGCAATGGCGCTGTACCCACTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTACAACGTCCTGCGCCAGGAAGGCACGCAGAAAAGCGTCATCGACACCATGCAGACCCGCAACGAGCTGTACGAAAGCATCa                                               >  1:660009/1‑149 (MQ=255)                                                                                                        cATGTGGCAATGGCGCTGTACCCACTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTACAACGTCCTGCGCCAGGAAGGCACGCAGAAAAGCGTCATCGACACCATGCAGACCCGCAACGGGCTGTACGAAAGCATCaa                                              <  2:242332/149‑1 (MQ=255)                                                                                                                    gcgcTGTACCCACTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTACAACGTCCTGCGCCAGGAAGGCACGCAGAAAAGCGTCATCGACACCATGCAGACCCGCAACGAGCTGTACGAAAGCATCAACTACTACCAGTa                                  <  1:502476/149‑1 (MQ=255)                                                                                                                      gcTGTACCCACTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTACAACGTCCTGCGCCAGGAAGGCACGCAGAAAAGCGTCATCGACACCATGCAGACCCGCAACGa                                                                <  2:172097/117‑1 (MQ=255)                                                                                                                      gcTGTACCCACTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTACAACGTCCTGCGCCAGGAAGGCACGCAGAAAAGCGTCATCGACACCATGCAGACCCGCAACGa                                                                >  1:172097/1‑117 (MQ=255)                                                                                                                             ccACTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTACAACGTCCTGCGCCAGGAAGGCACGCAGAAAAGCGTCATCGACACCATGCAGACCCGCAACGAGCTGTAc                                                         <  2:4076/117‑1 (MQ=255)                                                                                                                             ccACTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTACAACGTCCTGCGCCAGGAAGGCACGCAGAAAAGCGTCATCGACACCATGCAGACCCGCAACGAGCTGTAc                                                         >  1:4076/1‑117 (MQ=255)                                                                                                                             ccACTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTACAACGTCCTGCGCCAGGAAGGCACGCAGAAAAGCGTCATCGACACCATGCAGACCCGCAACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGaa                         >  1:117654/1‑149 (MQ=255)                                                                                                                             ccACTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTACAACGTCCTGCGCCAGGAAGGCACGCAGAAAAGCGTCATCGACACCATGCAGACCCGCAACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGaa                         >  2:825937/1‑149 (MQ=255)                                                                                                                              cACTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTACAACGTCCTGCGCCAGGAAGGCACGCAGAAAAGCGTc                                                                                          <  2:638635/83‑1 (MQ=255)                                                                                                                              cACTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTACAACGTCCTGCGCCAGGAAGGCACGCAGAAAAGCGTc                                                                                          >  1:638635/1‑83 (MQ=255)                                                                                                                              cACTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTACAACGTCCTGCGCCAGGAAGGCACGCAGAAAAGCGTCATCGACACCATGCAGACCCGCAACGAGCTGTAc                                                         >  2:801620/1‑116 (MQ=255)                                                                                                                              cACTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTACAACGTCCTGCGCCAGGAAGGCACGCAGAAAAGCGTCATCGACACCATGCAGACCCGCAACGAGCTGTAc                                                         <  1:801620/116‑1 (MQ=255)                                                                                                                               aCTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTACAACGTCCTGCGCCAGGAAGGCACGCAGAAAAGCGTCATCGACACCATGCAGACCCGCAACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGc                       <  2:419551/149‑1 (MQ=255)                                                                                                                                cTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTACAACGTCCTGCGCCAGGAAGGCACGCAGAAAAGCGTCATCCACACCATGCAGACCCGCAACGAGCTGTACGAAAGCACCAACTACTACCAGTACGAAGAGAAGCt                      >  2:105582/1‑149 (MQ=255)                                                                                                                                 tttCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTACAACGTCCTGCGCCAGGAAGGCACGCAGAAAAGCGTCATCGACACCATGCAGACCCGCAACGAGCTGTACGAAAGCATCACCTACTACCAGTACGAAGAGAAGCTc                     >  1:209318/1‑149 (MQ=255)                                                                                                                                     aGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTACAACGTCCTGCGCCAGGAAGGCACGCAGAAAAGCGTCATCGACACCATGCCGACCCGCAACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAACCCGACa                 >  2:700873/1‑149 (MQ=255)                                                                                                                                      gCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTACAACGTCCTGCGCCAGGAAGGCACGCAGAAAAGCGTCATCGACACCATGCAGACCCGCAACGAGCTGTACGAAAGCATCAACTCCTACCAGTACGAAGAGAAGCTCGAcca                >  1:37861/1‑147 (MQ=255)                                                                                                                                      gCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTACAACGTCCTGCGCCAGGAAGGCACGCAGAAAAGCGTCATCGACACCATGCAGACCCGCAACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACaa                >  2:67947/1‑149 (MQ=255)                                                                                                                                      gCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTACAACGTCCTGCGCCAGGAAGGCACGCAGAAAAGCGTCATCGACACCATGCAGACCCGCAACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACaa                >  1:750440/1‑149 (MQ=255)                                                                                                                                         ttCCGCGCCATGAACCGCGCCGCTGAACATGTCTACAACGTCCTGCGCCAGGAAGGCACGCAGAAAAGCGTCATCGACACCATGCAGACCCGCAACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCt             >  1:273751/1‑149 (MQ=255)                                                                                                                                             gcgcCATGAACCGCGCCGCTGAACATGTCTACAACGTCCTGCGCCAGGAAGGCACGCAGAAAAGCGTCATCGACACCATGCAGACCCGCAACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGttt         >  1:855628/1‑149 (MQ=255)                                                                                                                                                 cATGAACCGCGCCGCTGAACATGTCTACAACGTCCTGCGCCAGGAAGGCACGCAGAAAAGCGTCATCGACACCATGCAGACCCGCAACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGccc     <  1:387734/149‑1 (MQ=255)                                                                                                                                                    gAACCGCGCCGCTGAACATGTCTACAACGTCCTGCGCCAGGAAGGCACGCAGAAAAGCGTCATCGACACCATGCAGACCCGCAACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGGCAACCTGTTTGCCCGTa  >  1:47873/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                     CATGTACCGCCAGTTTGCCGATGCGGTGCAGGTGCCGATCCTCGCCAACATCACCGAATTTGGTGCCACGCCGCTGTTTACCACCGACGAATTACGCAGCGCCCATGTCGCAATGGCGCTGTACCCACTTTCAGCGTTCCGCGCCATGAACCGCGCCGCTGAACATGTCTACAACGTCCTGCGCCAGGAAGGCACGCAGAAAAGCGTCATCGACACCATGCAGACCCGCAACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTA  >  NC_000913_3_pae_tpiA/349263‑349558

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.