New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913_3_pae_tpiA | 3242994 = | 61 (0.940) | 5 (0.080) | 5/274 | 8.6 | 8.0% | coding (321/1488 nt) | uxaA | altronate hydrolase |
? | NC_000913_3_pae_tpiA | 3243029 = | 56 (0.890) | coding (286/1488 nt) | uxaA | altronate hydrolase | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
GTCAGTACCTTCGGCGTTGTTGGTCTCTTTCAGAAAACGGTTCTGGATCTGCCGCGCGATGCCGTTGACACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCGCAATATCCGCCAATGCATAACCAATCGGCAG > NC_000913_3_pae_tpiA/3242850‑3243137 | gTCAGTACCTTCGGCGTTGTTGGTCTCTTTCAGAAAACGGTTCTGGATCTGCCGCGCGATGCCGTTGACACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCAc < 1:568233/149‑1 (MQ=255) tCAGTACCTTCGGCGTTGTTGGTCTCTTTCAGAAAACGGTTCTGGATCTGCCGCGCGATGCCGTTGACACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACg > 1:952163/1‑149 (MQ=255) cAGTACCTTCGGCGGTGTTGGTCTCGTTCAGAAAACGGTGCTGGATCTGCCGCGCGATGCCGTTGACACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGa < 2:841098/149‑1 (MQ=255) gTACCTTCGGCGTTGTTGGTCTCTTTCAGAAAACGGTTCTGGATCTGCCGCGCGATGCCGTTGACACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATc < 2:1085047/149‑1 (MQ=255) gTACCTTCGGCGTTGTTGGTCTCTTTCAGAAAACGATTCTGGATCTGCCGCGCGATGCCGTTGACACAGCCCCCGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGAGCGGCGATAGATCTGCACTTCACGagc > 1:325123/1‑147 (MQ=255) tACCTTCGGCGTTGTTGGTCTCTTTCAGAAAACGGTTCTGGATCTGCCGCGCGATGCCGTTGACTCAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCt > 1:617902/1‑149 (MQ=255) tACCTTCGGCGTTGTTGGTCTCTTTCAGAAAACGGTTCTGGATCTGCCGCGCGATGCCGTTGACACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCt > 1:149620/1‑149 (MQ=255) gttgGTCTCTTTCAGAAAACGGTTCTGGATCTGCCGCGCGATGCCGTTGACACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATGTGCCGCTTGCgcag > 1:505020/1‑149 (MQ=255) gttgGTCTCTTTCAGAAAACGGTTCTGGATCTGCCGCGCGATGCCGTTGACACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGcacaa > 1:68135/1‑148 (MQ=255) tgGTCTCTTTCAGAAAACGGTTCTGGATCTGCCGCGCGATGCCGTTGACACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCgcaggc > 1:861910/1‑149 (MQ=255) gTCTCTTTCAGAAAACGGTTCTGGATCTGCCGCGCGATGCCGTTGACACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCgcaggcag < 1:986758/149‑1 (MQ=255) tctTTCAGAAAACGGTTCTGGATCTGCCGCGCGATGCCGTTGACACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATc < 1:243399/149‑1 (MQ=255) ctTTCAGAAAACTGGTCTGGAGCTGCCGCGCGATGCCGTTGACACAGCCCACGGTTGTCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATcc < 2:897870/149‑1 (MQ=255) tttCAGAAAACGGTTCTGGATCTGCCGCGCGATGCCGTTGACACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCt > 2:156611/1‑149 (MQ=255) ttCAGAAAACGGTTCTGGATCTGCCGCGCGATGCCGTTGACACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATcc < 1:822774/147‑1 (MQ=255) ttCAGAAAACGGTTCTGGATCTGCCGCGCGATGCCGTTGACACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATcc > 2:822774/1‑147 (MQ=255) gtCAGAAAACGGTTCTGGATCGGCCGCGCGTTGCCGTTGACACAGCCCACGGGTGGCAGGATCCACAGCTCATTACGCTCCTCTTTTACTCCGTCGGCGCGCCGCGAGATCTACACTTCACGATCTGCCCCTTGCGCAGGCAGATCCTg < 2:962895/148‑1 (MQ=255) gAAAACGGTTCTGGATCTGCCGCGCGATGCCGTTGACACAGCCCAAGGTTGGCAGGATGCACAGCTCATTAAGAAATCGGTCATCGCGGCTGGCGCGACGCTAGATCTGCCCTCCACTAGCGGCCGCTTGCGCACGCAAATCCTGaaaa > 2:669786/1‑149 (MQ=255) aaaaCGGTTCTGGATCTGCCGCGCGATGCCGTTGACACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAAt > 2:1129574/1‑149 (MQ=255) aaCGGTTCTGGATCTGCCGCGCGATGCCGTTGACACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCa < 1:411436/149‑1 (MQ=255) aCGGTTCTGGATCTGCCGCGCGATGCCGGTGACACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTCCCGCTTGCGCAGGCAGATCCTGAAAATCAg < 1:1045336/149‑1 (MQ=255) cGGTTCTGGATCTGCCGCGCGATGCCGGTGACACAGCTCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAgg < 1:409975/149‑1 (MQ=255) cTGCCGCGCGAGTCCGTTGACACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGAt < 1:468825/149‑1 (MQ=255) tGCCGCGCGATGCCGTTGACACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATa < 1:1046813/149‑1 (MQ=255) gcgAGGCCGTTGACACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATc < 2:164360/149‑1 (MQ=255) gATGCCGTTGACACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCa < 2:952163/149‑1 (MQ=255) ccGTTGACACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCCGATc > 1:902940/1‑149 (MQ=255) cGTTGGCACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACCTCGCCGTTAGCGCGACGATGATTGTGCACTTGACGATCTGGCGCTTGCGCATGCAGATCCTGAAAATCAGGTTGATAGCGATACTGTTCAAAATCg > 2:905302/1‑149 (MQ=255) gACACAGGCCACGGTGGGTAGGCTCAATAGCACATTAAGCACCCCGATATCGCCGTTAGCGCGACGATAGATCTGCACCTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCGGGTTGATAGCGATACTGAGCCAGATCGCTCa < 2:314538/149‑1 (MQ=255) acaGCCCACGTTTGCCAGGAGCCACAGCTTATTACGCTCTCCGACATCGCCTTTATCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCATATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGAt < 2:932067/149‑1 (MQ=255) aGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGCTACTGATCCAGATCGCTCCGATTc > 2:471105/1‑149 (MQ=255) cgaCGGTTGGCAGGATCCACAGCTAATTACGCACCCCGACATAGCCGTTAGCGCGACGATAGATCTTCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTg > 1:743024/3‑149 (MQ=255) ccACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTg < 2:316257/149‑1 (MQ=255) aCGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATTGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTgcg > 2:1075533/1‑149 (MQ=255) cAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTCGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATtgt < 1:610951/149‑1 (MQ=255) ggATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGa > 2:557555/1‑131 (MQ=255) ggATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGa < 1:557555/131‑1 (MQ=255) ggATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTgg < 1:817950/149‑1 (MQ=255) aTCCACAGCTAATTAGCAACCCCCACAACGGCGGTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGc < 2:749068/149‑1 (MQ=255) tCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGcg > 1:620704/1‑149 (MQ=255) acaGCTCATTACGCACCCCGACAGCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGcgtga > 2:723189/1‑149 (MQ=255) caGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGcgtgaa > 1:287832/1‑149 (MQ=255) aGCTTATTACGCACCCCGACATCGCCGTTGGCGCGACGATAGATCTGCACTTCACGATCAGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGcgtgaac < 2:30495/149‑1 (MQ=255) aGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGcgtgaac < 2:743024/149‑1 (MQ=255) cATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGcgtgaacgtga < 1:1097476/149‑1 (MQ=255) aCGCACCCCGACATCGCCGTTAGCGCGACGATTGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAacac < 1:1075533/149‑1 (MQ=255) aCGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAacac < 1:333950/149‑1 (MQ=255) gCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCATGCTCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCt > 1:896044/1‑149 (MQ=255) ccccGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGAt > 2:493188/1‑102 (MQ=255) ccccGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGAt < 1:493188/102‑1 (MQ=255) cccaCATCGCAGTGAGCGCGACGATAGATTTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCGc < 2:325123/146‑1 (MQ=255) aTCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCGGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATGCGTGGGCGGAGTCTGGGCGTGAAGGTGAACACCTGCCGCAatat < 2:245766/149‑1 (MQ=255) ccGCCGTTAGCGCGACGAGAGATCTGCACTTCACGATCTACCGCTTGAGCAGGCAGATCCTGAAAATCAGGTTGATAGCTATACTGATCCAGATCGCTCAGATTCCTGCGCGTATTGTGGGCGCGAACGTGAACACCTGCCGCAATATc < 1:869364/148‑1 (MQ=255) gCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGACCGTGAACACCTGCCGCCATACCCg > 2:37837/1‑149 (MQ=255) ctgTTAGCGCGACGATAGATCGGCAGTTCACGATCTGCCGTTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGTGATACTGATCCAGATCGCACAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCGCAATATTCGc < 2:478581/147‑1 (MQ=255) cgttgggcgcGGCTATAGATCGGCATCTCACGATCGGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAAGGGGAACTCCTGCCGCAATATCCGc < 2:674300/143‑1 (MQ=255) gacgaTAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCGCAATATCCGCCAATGCATaa < 2:853480/149‑1 (MQ=255) tCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCg > 1:587242/1‑120 (MQ=255) tCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCg < 2:587242/120‑1 (MQ=255) tCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTACGCGTATTGTGGGCGTGAACGTGAACACCTGCCGCAATATCCACCAATGCATAACCAATCGGc > 1:1015860/1‑149 (MQ=255) tGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGAGCGCTCAGATTCGTGCGCGTATTGTGGGCGTGGACGTGAACACCTGCCGCAACATCCGCCAACGCCTAACCAATCgcccg > 1:1061298/1‑145 (MQ=255) | GTCAGTACCTTCGGCGTTGTTGGTCTCTTTCAGAAAACGGTTCTGGATCTGCCGCGCGATGCCGTTGACACAGCCCACGGTTGGCAGGATCCACAGCTCATTACGCACCCCGACATCGCCGTTAGCGCGACGATAGATCTGCACTTCACGATCTGCCGCTTGCGCAGGCAGATCCTGAAAATCAGGTTGATAGCGATACTGATCCAGATCGCTCAGATTCGTGCGCGTATTGTGGGCGTGAACGTGAACACCTGCCGCAATATCCGCCAATGCATAACCAATCGGCAG > NC_000913_3_pae_tpiA/3242850‑3243137 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |