New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_pae_tpiA	141977 =	NA (NA)	5 (0.080)	5/264	8.3	NA	intergenic (+10/+31)	hpt/can	hypoxanthine phosphoribosyltransferase/carbonic anhydrase
	?	NC_000913_3_pae_tpiA	142000 =	NA (NA)					intergenic (+33/+8)	hpt/can	hypoxanthine phosphoribosyltransferase/carbonic anhydrase
Rejected: Coverage evenness skew score above cutoff.

TAGAATTTATCGGTTTCTCGATCCCGGATGAGTTTGTGGTGGGTTACGGCATTGATTACGCACAGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGCTCAAGGGTTTCGCGGTTGGT‑GGCGGTAACATCCAGATCACGCAGCAAGCCGTCGTGAATGCCGTAGGCCCAGCCGTGAATGG  >  NC_000913_3_pae_tpiA/141852‑142147                                                                                                                                                     |                                                                                                                                                     tataagttATCTGTTTCTCGGTCCCGGATGAGTTTGTGGGGGGTTACGGCATTGATTACGCACAGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggcat                                                                                                                                                      <  2:282059/143‑1 (MQ=255) tAGAATTTATCGGTTTCTCGATCCCGGATGAGTTTGTGGTGGGTTACGGCATTGATTACGCACAGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggcat                                                                                                                                                      <  2:166604/149‑1 (MQ=255)  aGAATTTATCGGTTTCTCGATCCCGGATGAGTTTGTGGTGGGTTACGGCATTGATTACGCACAGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggcatg                                                                                                                                                     <  1:649716/149‑1 (MQ=255)   gAATTTATCGGTTTCTCGATCCCGGATGAGTTTGTGGTGGGTTACGGCATTGATTACGCACAGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATACgggatgg                                                                                                                                                    >  1:1046014/1‑149 (MQ=255)      tttATCGGTTTCTCGATCCCGGATGAGTTTGTGGTGGGTTACGGCATTGATTACGCACAGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggcatggcat                                                                                                                                                 >  2:1064531/1‑149 (MQ=255)       ttATCGGTTTCTCGATCCCGGATGAGTTTGTGGTGGGTTACGGCATTGATTACGCACAGCGTTACCGTCATCTGCCGTGTATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCAtt                                                                                                                                                <  2:298282/149‑1 (MQ=255)          tCGGTTTCTCGATCCCGGATGAGTTTGTGGTGGGTTACGGCATTGATTACGCACAGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCAttttt                                                                                                                                             >  1:1094776/1‑149 (MQ=255)           cGGTTTCTCGATCCCGGATGAGTTTGTGGTGGGTTACGGCATTGATTACGCACAGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTa                                                                                                                                            <  1:91038/149‑1 (MQ=255)             gTTTCTCGATCCCGGATGAGTTTGTGGTGGGTTACGGCATTGATTACGCACAGCGTTACCGTCATCTGCCGTATATCGGCAGAGTGATTCTGCTGGACGCGTAAGTGTGAAGTTGCCGGATGTGTTGCCTCCGGCCTGGCATTTTTAtt                                                                                                                                          >  1:821018/1‑149 (MQ=255)             gTTTCTCGATCCCGGATGAGTTTGTGGTGGGTTACGGCATTGATTACGCACAGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCCTCAGCCCTAGCAtttttttt                                                                                                                                          >  2:748743/1‑149 (MQ=255)             gTTTCTCGATCCCGGATGAGTTTGTGGTGGGTTACGGCATTGATTACGCACAGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTAtt                                                                                                                                          >  2:368384/1‑149 (MQ=255)             gTTTCTCGATCCCGGATGAGTTTGTGGTGGGTTACGGCATTGATTACGCACAGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTAtt                                                                                                                                          >  1:820042/1‑149 (MQ=255)             gTTTCTCGATCCCGGATGAGTTTGTGGTGGGTTACGGCATTGATTACGCACAGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTAtt                                                                                                                                          >  1:155930/1‑149 (MQ=255)             gTTTCTCGATCCCGGATGAGTTTGCGCTGGGTGTCGGCATTGATTACGCACAGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCCTGGCATTTTTCtt                                                                                                                                          >  2:819376/1‑149 (MQ=255)               ttCTCGATCCCGGATGAGTTTGTGGTGGGTTACGGCATTGATTACGCACAGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTtg                                                                                                                                        <  2:155930/149‑1 (MQ=255)                    gATCCCGGATGAGTTTGTGGTGGGTTACGGCATTGATTACGCACAGCGTTCGCGGCATCTGCGGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATTGCATTTTTCTTTGTGGtt                                                                                                                                   >  2:93087/1‑149 (MQ=255)                     attcctgATGAGTTTGTGGTGGGTTTCGTCATTGACTACGCAAAGCGTTACCGTCATCTGCCGTATATCGGAAAAGTGATTGTACTGGTCGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTg                                                                                                                                  <  2:597709/143‑1 (MQ=255)                     aTCCCGGATGAGGTTGTGGTGGGTTACGGCATTGATTACGCACAGCGCTCCCGTCATCTGCCGTAGATTGGCAAAGGGATTCTGCTGGACGAAGAAGTGTGAAGTGGCCGGATGTGTTGCATGCGGCAGGGGATTTTTATCTGTGGTTg                                                                                                                                  >  2:130548/1‑149 (MQ=255)                       cccGGATGAGTTTGTGGTGGGTTACGGCATTGATTACGCACAGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGc                                                                                                                                <  1:737506/149‑1 (MQ=255)                                   tgtgGTGGGTTACGGCATTGATTACGCACAGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATACGGCATTGGATTTGTATTTGTGGTTGGCGTGTTTCAGCtt                                                                                                                    <  1:847342/149‑1 (MQ=255)                                       gtggGTTACGGCATTGATTACGCACAGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCAGGCATGGCATTTTCGTCTGGGGTTGGGGTGTTTCAGCttagga                                                                                                                >  2:753468/1‑145 (MQ=255)                                        tggGTTACGGCATTGATTACGCACAGCGTTACCGTCATCTGCCGTATATAGGCAGAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGt                                                                                                               >  1:1076090/1‑149 (MQ=255)                                           gTTACGGCATTGATTACGCACAGCGTTACCGTCATCTGCCGTATATCGGCACCGTGTTTCGCTTTGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTgg                                                                                                            <  1:1118560/149‑1 (MQ=255)                                           gTTACGGCATTGATTACGCACAGCGTTACCGTCATCTGCCGTATATCGGAAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTgg                                                                                                            >  1:45734/1‑149 (MQ=255)                                            ttACGGCATTGATTACGCACAGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTg                                                                                                             >  2:390345/1‑147 (MQ=255)                                            ttACGGCATTGATTACGCACAGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTg                                                                                                             <  1:390345/147‑1 (MQ=255)                                            ttACGGCATTGATTACGCACAGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGa                                                                                                           <  2:72597/149‑1 (MQ=255)                                                 gCATTGATTACGCACAGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATcc                                                                                                      >  1:137353/1‑149 (MQ=255)                                                       aTTACGCACAGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGAc                                                                                                >  1:918418/1‑149 (MQ=255)                                                        ttccGCACAGCGTTACCGTAGCCTGCGGTATTTCGGGTAAGTGCTTCTTCTGGACTAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACg                                                                                               <  1:776753/146‑1 (MQ=255)                                                           cGCACAGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTa                                                                                            >  2:643457/1‑149 (MQ=255)                                                            gCACAGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTaa                                                                                           >  2:253502/1‑149 (MQ=255)                                                            gCACAGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTaa                                                                                           >  2:657300/1‑149 (MQ=255)                                                             cacaGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAAc                                                                                          <  1:368384/149‑1 (MQ=255)                                                              acaGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGtt                                                                                                                                   >  2:786969/1‑107 (MQ=255)                                                              acaGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGtt                                                                                                                                   <  1:786969/107‑1 (MQ=255)                                                              acaGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTCACg                                                                                         >  2:548221/1‑149 (MQ=255)                                                                aGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGtt                                                                                       >  2:636962/1‑149 (MQ=255)                                                                  cGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGc                                                                                     <  2:1094776/149‑1 (MQ=255)                                                                    ttACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGCTc                                                                                   <  1:605711/149‑1 (MQ=255)                                                                       ccGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGCTCAAg                                                                                <  1:242040/149‑1 (MQ=255)                                                                       ccGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATACGGCATGGCATTTTTAGTTGTGGTTGGCGTGTTTAAGCTGCAGGTTGGAAATCCCGTGACGTTAACGTTGCTTAAg                                                                                >  1:36082/1‑149 (MQ=255)                                                                        cGTCATCTGCCGTCTATCGGCACAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCAGGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGCAATCCCGTGACGGTAACGTTGCTCAAgg                                                                               <  1:1568/149‑1 (MQ=255)                                                                        cGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGCTCAAgg                                                                               <  1:1064531/149‑1 (MQ=255)                                                                        cGTCAGCTGCCGTATATCGGCAAAGTGATTCTGCCGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGCTCAAgg                                                                               <  1:774075/149‑1 (MQ=255)                                                                          tCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGATTGAGGTTGGAAATCCCGTGCCGGTAACGTTGCTCAACGGt                                                                             >  2:569422/1‑149 (MQ=255)                                                                           cATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGCTCAAGGGtt                                                                            >  1:68622/1‑149 (MQ=255)                                                                            aTCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGAAAGTGTGAAGTTGCCAGATGTGTTGCCTTCGGCATGGCATTTTGATTTGTGGTTGGCGTGTTGCAGCTTAAGGTTGAAAAGCCCGTGACGGTACCATTGCTCCAGGAttt                                                                           >  2:953667/1‑149 (MQ=255)                                                                               tGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGCTCAAGGGTTTcgc                                                                        >  1:414689/1‑149 (MQ=255)                                                                               tGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGACATGGCATTTTTATTTTTGGTTGTCATGTTTCAGCTTGAGGTTGGAAATCCAGTGAGGGTAATGTTGATCAAGTGTTTcgc                                                                        >  2:411488/1‑149 (MQ=255)                                                                                 ccGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggcat                                                                                                                                                      <  2:955620/69‑1 (MQ=255)                                                                                 ccGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCggcat                                                                                                                                                      >  1:955620/1‑69 (MQ=255)                                                                                 ccGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGt                                                                                                                                    >  1:222789/1‑87 (MQ=255)                                                                                 ccGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGt                                                                                                                                    <  2:222789/87‑1 (MQ=255)                                                                                 ccGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGCTCAAGGGTTTCGCgg                                                                      >  1:515456/1‑149 (MQ=255)                                                                                  gttagagcGGCCAAGTGCTTCTGCTGTCCTACGAAGTGTGAATTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTTACGGTAACGTTGCTCAAGGGTTTCGCGGt                                                                     <  1:468238/142‑1 (MQ=255)                                                                                     atatTGGCAAAGTGATTCTGCTTGACGAGTAAGGGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGGGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGCTCAAGGGTTTCGCGGTtgg                                                                  <  1:480262/149‑1 (MQ=255)                                                                                     atatCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCCGGATGGCGTGGTTATTTAAATTGTGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGCTCAAGGGTTTCGCGGAtgg                                                                  >  1:553509/1‑149 (MQ=255)                                                                                       atCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGCTCAAGGGTTTCGCGGTtggt‑g                                                               <  2:137353/149‑1 (MQ=255)                                                                                           gCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGCTCAAGGGTTTCGCGGTTGGT‑GGCgg                                                           <  2:995355/149‑1 (MQ=255)                                                                                           gCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGCTCAAGGGTTTCGCGGTTGGT‑GGCgg                                                           <  1:393235/149‑1 (MQ=255)                                                                                            cAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGCTCAAGGGTTTCGCGGTTGGT‑GGCGGt                                                          <  1:780301/149‑1 (MQ=255)                                                                                             aaaGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGGTTGAGGTTGGAAATCCCGTGACGGTAACGTTGCTCAAGGGTTTCGCGGTTGGT‑GGCGGTa                                                         >  1:42200/1‑149 (MQ=255)                                                                                             aaaGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGCTCAAGGGTTTCGCGGtta                                                                   <  2:485545/140‑2 (MQ=255)                                                                                             aaaGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGCTCAAGGGTTTCGCGGTtg                                                                   >  1:485545/1‑140 (MQ=255)                                                                                              aaGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGGAACGTTGCTCAAGGGTTTCGCGGTTGGG‑TGCGGTaa                                                        >  1:251490/1‑149 (MQ=255)                                                                                                    ttCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGCTCAAGGGTTTCGCGGTtggt                                                                 <  1:916454/135‑1 (MQ=255)                                                                                                    ttCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGCTCAAGGGTTTCGCGGTtggt                                                                 >  2:916454/1‑135 (MQ=255)                                                                                                         ctgGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGCTCCAGAAACTTTGCGCGGTTGGT‑GGCGGTAACATCCAGATCa                                             <  1:846047/149‑1 (MQ=255)                                                                                                          tgGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCCTTTTTCTTTATGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATTCCGTGACGGTAAAGTTGCTCAAGGGTTTCGCGGTTGGT‑GGCGGCACGATCTAGATCAc                                            >  2:576322/1‑149 (MQ=255)                                                                                                          tgGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGCTCAAGGGTTTCGCGGTTGGT‑GGCGGTAACATCCAGATCAc                                            >  2:620548/1‑149 (MQ=255)                                                                                                           ggACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGCTCAAGGGTTTCGCGGTTGGT‑GGCGGTAACATCCAGATCACg                                           <  1:1055001/149‑1 (MQ=255)                                                                                                             aCGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGCTCAAGGGTTTCGCGGTTGGT‑GGCGGTAACATCCAGATCACgca                                         <  1:158043/149‑1 (MQ=255)                                                                                                              cgcgTAAGGGTGAAGTTGGCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGATAACCCGTGACGGTAACGGTGCTCAAGGGTTTCGCGGTTGGT‑GGCGGTAACATCCAGATCACgcag                                        <  2:60375/146‑1 (MQ=255)                                                                                                               gAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGCTCAAGGGTTTCGCGGTTGGT‑GGCGGTAACATCCAGATCACgcagc                                       >  2:1089104/1‑149 (MQ=255)                                                                                                                 gTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGCTCAACGAATCC‑CATTTCGTGGGCGGTAACATCCAGATCACGCAGCaa                                     <  1:847003/149‑1 (MQ=255)                                                                                                                  tAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGCTCAAGGGTTTCGCGGTTGGT‑GGCGGTAACATCCAGATCACGCAGCAAg                                    >  1:873587/1‑149 (MQ=255)                                                                                                                        tgAAGTTGGCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGCTCAAGGGTTTCGCGGTTGGT‑GGCGGTAACATCCAGATCACGCAGCAAGCcgtcg                              <  2:150208/149‑1 (MQ=255)                                                                                                                        tgAAGTTGGCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGCTCAAGGGTTTCGCGGTTGGT‑GGCGGTAACATCCAGATCACGCAGCAAGCcgtcg                              <  1:950664/149‑1 (MQ=255)                                                                                                                        tgAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGCTCAAGGGTTTCGCGGTTGGT‑GGCGGTAACATCCAGATCACGCAGCAAGCcgtcg                              >  2:772466/1‑149 (MQ=255)                                                                                                                              tGCCGGATGTGTTGCTTCCGGCAGGGCATTTTTATGTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGCTCAAGGGTTTCGCGGTTGGT‑GGCGGTAACATCCAGATCACGCAGCAAGCCGTCGTGAATg                        <  2:123143/149‑1 (MQ=255)                                                                                                                                ccGGATGGGTTGCATCCGGCATGGCATTTTTATTGGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGCTCAAGGGTTTCGCGGTTGGT‑GGCGGTAACATCCAGATCACGCAGCAAGCCGTCGTGAATGcc                      <  2:654768/149‑1 (MQ=255)                                                                                                                                    atttgtTGCATCCCGCCGGGCATTTTTATTTGTGGTGGGCGTGTTTCAGCTGGAGGTTGGAAATCCCGTGACGGTAACGTTGCTCAAGGGTTTCGCGGTTGGT‑GGCGGTAACATCCAGATCACGCAGCAAGCCGTCGTGAATGCCGTAg                  <  1:148208/146‑1 (MQ=255)                                                                                                                                     tgtgTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGCTCAAGGGTTTCGCGGTTGGT‑GGCGGTaa                                                        <  2:308147/110‑1 (MQ=255)                                                                                                                                     tgtgTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGCTCAAGGGTTTCGCGGTTGGT‑GGCGGTaa                                                        >  1:308147/1‑110 (MQ=255)                                                                                                                                        gtTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGCTCAAGGGTTTCGCGGTTGGT‑GGCGGTAACATCCAGATCACGCAGCAAGCCGTCGTGAATGCCGTAGGccc              >  1:768645/1‑149 (MQ=255)                                                                                                                                        gtTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGCTCAAGGGTTTCGCGGTTGGT‑GGCGGTAACATCCAGATCACGCAGCAAGCCGTCGTGAATGCCGTAGGccc              >  1:584/1‑149 (MQ=255)                                                                                                                                         ttGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGCTCAAGGGTTTCGCGGTTGGT‑GGCGCTAACATCCAGATCACGCAGCAAGCCGGCGTGAATGCCGTAGGcccc             >  2:322021/1‑148 (MQ=255)                                                                                                                                          tGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGCTCAAGGGTTTCGCGGTTGGT‑GGCGGTAACATCCAGATCACGCAGCAAGCCGTCGTGAATGCCGTAGGCCCAg            <  2:768645/149‑1 (MQ=255)                                                                                                                                           gCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGCTCAAGGGTTTCGCGGTTGGT‑GGCGGTAACATCCAGATCACGCAGCAAGCCGTCGTGAATGCCGTAGGCCCAGc           >  1:31204/1‑149 (MQ=255)                                                                                                                                              tCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGCTCAAGGGTTTCGCGGTTGGT‑GGCGGTAACATCCAGATCACGCAGCAAGCCGTCGTGAATGCCGTAGGCCCAGCCGt        <  1:748743/149‑1 (MQ=255)                                                                                                                                              tCCGGCATGGCATTGTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGCTCAAGGGTTTCGCGGTTGGT‑GGCGGTAACATCCAGATCACGCAGCAAGCCGTCGTGAATGCCGTAGGCCCAGCCGt        <  2:771755/149‑1 (MQ=255)                                                                                                                                                  gcatggcatTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGCTCAAGGGTTTCGCGGTTGGT‑GGCGGTAACATCCAGATCACGCAGCAAGCCGTCGTGAATGCCGTAGGCCCAGCCGTGAAt    <  1:636962/149‑1 (MQ=255)                                                                                                                                                    atggcatTTCTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGCTCAAGGGTTTCGCGGTTGGT‑GGCGGTAACATCCAGATCACGCAGCAAGCCGTCGTGAATGCCGTAGGCCCAGCCGTGAATgg  <  2:704272/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     TAGAATTTATCGGTTTCTCGATCCCGGATGAGTTTGTGGTGGGTTACGGCATTGATTACGCACAGCGTTACCGTCATCTGCCGTATATCGGCAAAGTGATTCTGCTGGACGAGTAAGTGTGAAGTTGCCGGATGTGTTGCATCCGGCATGGCATTTTTATTTGTGGTTGGCGTGTTTCAGCTTGAGGTTGGAAATCCCGTGACGGTAACGTTGCTCAAGGGTTTCGCGGTTGGT‑GGCGGTAACATCCAGATCACGCAGCAAGCCGTCGTGAATGCCGTAGGCCCAGCCGTGAATGG  >  NC_000913_3_pae_tpiA/141852‑142147

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.