New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_pae_tpiA 4121531 =117 (1.960)5 (0.090) 5/276 7.8 4.3% coding (133/1332 nt) hslU molecular chaperone and ATPase component of HslUV protease
?NC_000913_3_pae_tpiA 4121551 = 113 (1.990)coding (113/1332 nt) hslU molecular chaperone and ATPase component of HslUV protease
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 118 total aligned reads displayed.

TTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCGCATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTCCTGGCCGATGATGTGCTTATCCAGTTCGCTGACGATTTCGCGTGGGGTCATTTCAGACATGGGAGATCCTTACGCT  >  NC_000913_3_pae_tpiA/4121383‑4121679
                                                                                                                                                    |                                                                                                                                                      
ttACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCGCATTCGCCAGCTTAGCCAGACGACGGGCGATTTGAGTTTTACAGACACCGGTAGGGCCGATCATCAGGATATTTTTCGGGGTCCCTTCATGgcg                                                                                                                                                        >  2:526631/1‑149 (MQ=255)
ttACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCGCATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGgcg                                                                                                                                                        >  2:288711/1‑149 (MQ=255)
ttACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCGCATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTGTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGgcg                                                                                                                                                        <  1:813731/149‑1 (MQ=255)
  aCCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCGCATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCa                                                                                                                                                      >  2:658809/1‑149 (MQ=255)
  aCCGACCTATCCCACTTCGGTGCATTTGGTCGCTTCAACTTTGATGAACGGCGCATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCa                                                                                                                                                      <  2:552719/149‑1 (MQ=255)
         gggCCTACTTCGGTGTATTTGGTCGCTTCAAGTTTGTTGAACGGCGCATTCGCCAGCTTAGCTAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATAATCAGGTTATTTTTCGGGGTCACTTCATGGCGCAGCTCTTc                                                                                                                                               <  2:528311/147‑1 (MQ=255)
          aGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGGGTATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCg                                                                                                                                              <  1:343141/149‑1 (MQ=255)
           gCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCGCATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGt                                                                                                                                             >  1:767435/1‑149 (MQ=255)
            ctcACTTCGGTTAATTTGGTCGCTTTAACTTTGTTGAACGGCGCATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGtt                                                                                                                                            <  1:427643/147‑1 (MQ=255)
            cccACTTCGGTGAATTTGGTCACTTCAACTTTGATGAACGGCTCATGCGCAAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCTACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGctcaacgaa                                                                                                                                            <  2:297072/149‑7 (MQ=255)
               aCTTCGGTGAATTTCGTCTCTTCAACTTCGATGAACAGCGCATTCGCCAGCTTAGCTAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAg                                                                                                                                         <  1:10413/149‑1 (MQ=255)
                 ttCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCGCATTCGCCAGCTTTGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCt                                                                                                                                       >  1:726000/1‑149 (MQ=255)
                 ttCGGTGAATTTGGTCGCTTCAACTTTGAGGAAAGGCGCATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCt                                                                                                                                       >  2:9828/1‑149 (MQ=255)
                  tCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCGCATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTg                                                                                                                                      >  1:867278/1‑149 (MQ=255)
                         aTTTGGTCGCTTCAACTTTAACTAACGCCGCAAACGCCAGCTTAGCCAGTCGACGGGCGATTTCAGTTTTACCGACACCGGTCCGACCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGa                                                                                                                               <  1:522798/149‑1 (MQ=255)
                           tttgTCGCTTCAACTTTGATGAACGGCGCATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACg                                                                                                                             <  1:194508/146‑1 (MQ=255)
                                   ttCAACTTTGATGAACGGCGCATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGt                                                                                                                     >  1:707656/1‑149 (MQ=255)
                                   ttCAACTTTGATGAACGGCGCATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTCCATGGCGCATCTCTTCGTTGAGCTGCATTCAATGCCAGCGGt                                                                                                                     >  1:257711/1‑149 (MQ=255)
                                   ttCAACTTTGATGAACGGCGCATTCGCCAGCTTAGACAGACGACAGGCGATTTAAGTTTTCCCAAAACCGGTCGGGCCCAACCTCAGGATATTTTACGGGGTCACTCCATGGCACAGCCCTACCTCGAGCTGCATCCGCCGCCAGCTGt                                                                                                                     >  2:291478/1‑149 (MQ=255)
                                   ttCAAATTTGATGAACGGCTCATTCGCCAGCTTATCCAGACGACGGGCGGTTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGCCGCCACCGGt                                                                                                                     >  2:879234/1‑149 (MQ=255)
                                        cTTTGATGAACGGCGCATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGc                                                                                                              >  2:263077/1‑149 (MQ=255)
                                        cTTTGATGAACGGCGCATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGc                                                                                                              >  1:613122/1‑149 (MQ=255)
                                         tttGATTTACGGCGCAGTCGCCAGCTTAGCCATACGAAGGGCGATTTCAGTTTTACCGACACCGGTCGTGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCa                                                                                                             <  1:469535/149‑1 (MQ=255)
                                         tttGATGAACGGCGCATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGAGGACAGCGGTT‑‑ACGCa                                                                                                             >  1:154090/1‑149 (MQ=255)
                                         tttGATGAACGGCGCATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGACGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCa                                                                                                             >  1:442134/1‑149 (MQ=255)
                                           tgaggaACGGCCTATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCaga                                                                                                           <  2:100190/149‑1 (MQ=255)
                                               gaACGGCGCATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGCCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCaa                                                                                                       >  1:221921/1‑149 (MQ=255)
                                               gaACGGCGCATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACAACGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGATGAGCTTTATGCGACGCCAGCGGTT‑‑ACGCAGAGCag                                                                                                       >  1:92913/1‑148 (MQ=255)
                                                taCGGCTCATGCGCGAGCTTCGCCAGACGACGGCGGATTTCTGCTGTCCTCACACCGTGAGGGGTTGTGATCAGGTTATTGTTCTGGGTCACTTCATGGCGCAGTTCTTCTTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCaag                                                                                                      <  2:317468/148‑2 (MQ=255)
                                                    gcgcATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGcc                                                                                                  >  1:682620/1‑149 (MQ=255)
                                                      gcATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGTCGCAGCTCTTCGTTGAACTGCATGCCACGCCAGCGGTT‑‑ACGCAGAGCAATCGCcac                                                                                                >  1:200641/1‑149 (MQ=255)
                                                       cATTCGCCAGCGCAGCTAGACGACGGTCGATTTCCGTTTTACCGACACCGGTGGGGCCGATCATCAGGTTATTTTGCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCcaca                                                                                               <  2:919189/149‑1 (MQ=255)
                                                        aTTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCTACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAg                                                                                              >  2:845504/1‑149 (MQ=255)
                                                         ttCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCAATAGCGGATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTAAGCTGCATGGGACGCGAGCGGTT‑‑ACTGAGAGCAATCGCcacaaa                                                                                             >  1:721460/1‑147 (MQ=255)
                                                            gCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACg                                                                                          >  1:860206/1‑149 (MQ=255)
                                                             ccAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGc                                                                                         >  1:757584/1‑149 (MQ=255)
                                                                  ttAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGc                                                                                                                                 >  2:942559/1‑106 (MQ=255)
                                                                  ttAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGc                                                                                                                                 <  1:942559/106‑1 (MQ=255)
                                                                    aGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCCGCGAGT‑‑CCGCAGAGCAGCCGCCACAGACCGGTTGGCGt                                                                                  >  2:558139/1‑149 (MQ=255)
                                                                     gCCAGACGACGTGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGCGtt                                                                                 <  1:844941/149‑1 (MQ=255)
                                                                     gCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGCGtt                                                                                 <  1:288711/149‑1 (MQ=255)
                                                                      cgagagGACGTGCTATTTCAGTTGTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGCGTTg                                                                                <  2:236332/147‑1 (MQ=255)
                                                                        aGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTc                                                                              <  1:658809/149‑1 (MQ=255)
                                                                         gacgacGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCCGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTcc                                                                             >  2:387436/1‑149 (MQ=255)
                                                                          acgacgGGCGATTTCAGTTTTACCTACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTCCt                                                                            <  1:845504/149‑1 (MQ=255)
                                                                           cgacgGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTCCTg                                                                           <  2:561559/149‑1 (MQ=255)
                                                                            gacgGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCAACAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTCCTgg                                                                          <  2:121322/149‑1 (MQ=255)
                                                                             acgGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATTCGGATATTTTTAGGGGTCTCTGTAGGGCGCAGCTCTTCGTTGAGCTGCATGTGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTCCTGGc                                                                         <  2:114633/149‑1 (MQ=255)
                                                                               gggCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGGAGATCGCCAGCCCATCGGTT‑‑ACGCAGAGCAATCGCCAAAGAAAGCTTGGCGTTGTCCTGGCCg                                                                       >  1:240793/1‑149 (MQ=255)
                                                                                    aTTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTCCTGGCCgatgat                                                                  <  2:154090/149‑1 (MQ=255)
                                                                                     tttCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCGCTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTCCTGGCCGatgatg                                                                 >  1:689888/1‑149 (MQ=255)
                                                                                     tttCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTCCTGGCCGatgatg                                                                 >  1:890459/1‑149 (MQ=255)
                                                                                       tCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTCCTGGCCGATGAtgtg                                                               <  1:372996/149‑1 (MQ=255)
                                                                                        cAGTTTTCCCGGCACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTCCTGGCCGATGATGTGc                                                              <  2:395081/149‑1 (MQ=255)
                                                                                        cAGTTTTACCGACTCCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGAGCAGCCATCTGTAGAACGC‑GA‑CAGTCGCCACAGAACGCTTGGCGTTGTCCTGGCCGATGATGTGc                                                              <  1:1030085/149‑1 (MQ=255)
                                                                                        cAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCTGCGGGT‑‑ACTGATAGCAATCGCCACAGAACGCTTGGCGTTGTCCTGGCCGATGATGTGc                                                              <  1:203080/149‑1 (MQ=255)
                                                                                        cAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTCCTGGCCGATGATGTGc                                                              <  2:767435/149‑1 (MQ=255)
                                                                                           ttttACCGACAGCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTCCTGGCCGATGATGTGCTTa                                                           <  2:344535/149‑1 (MQ=255)
                                                                                           ttttACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGACAGCCGCG‑‑ACGCTGAGCAATAGCCACAGAACGCTTGGCGTTGTCCTGGCCGATGAtgtgtgta                                                           >  1:240198/1‑145 (MQ=255)
                                                                                                ccGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCATCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTCCTGGCCGATGATGTGCTTATCCat                                                      >  1:219026/1‑148 (MQ=255)
                                                                                                 cGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCATTGAGCTGCATGCGACGCCCGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTCCTGGCCGATGATGTGCTTATCCCGt                                                     >  2:648964/1‑149 (MQ=255)
                                                                                                  gACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTCCTGGCCGATGATGTGCTTATCCAGtt                                                    <  2:822411/149‑1 (MQ=255)
                                                                                                  gACACCGGCCGGGCCGATCATCAGGATATTTTTCGCGTTCATTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGTCACAGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTCCTGGCCGATGATGTGCTTATCCAGtt                                                    <  1:23418/149‑1 (MQ=255)
                                                                                                   acacCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTCCTGGCCGATGATGTGCTTATCCAGTTc                                                   >  2:653082/1‑149 (MQ=255)
                                                                                                        ggTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTCCTGGCCGATGATGTGCTTATCCAGTTCGCTGa                                              >  1:884464/1‑149 (MQ=255)
                                                                                                         gTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTCCTGGCCGATGATGTGCTTATCCAGTTCGCTGAc                                             >  1:595787/1‑149 (MQ=255)
                                                                                                           cGGGCCGATCAGCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTCCTGGCCGATGATGTGCTTATCCAGTTCGCTGACGa                                           <  2:757584/149‑1 (MQ=255)
                                                                                                              gCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTCCTGGc                                                                         <  2:633763/116‑1 (MQ=255)
                                                                                                              gCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTCCTGGc                                                                         >  1:633763/1‑116 (MQ=255)
                                                                                                                  atcatcAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCAt                                                                                                                                   >  1:924033/1‑56 (MQ=255)
                                                                                                                  atcatcAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCAt                                                                                                                                   <  2:924033/56‑1 (MQ=255)
                                                                                                                   tcatccGGAGTTTTTGCCTGGTCACTTGATGGCGCAGCTCTTCGTTGGGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGGAATCGCCACAGAACGCTTGGCGTTGTCCTGGCCGATGATGTGCTTATCCAGTTCGCTGACGATTTCGCGt                                   <  2:423378/149‑1 (MQ=255)
                                                                                                                     atcaGGATATTTTTCGGTGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTCCTGGCCGATGATGTGCTTATCCAGTTCGCTGACGATTTCGCGTgg                                 <  1:374318/149‑1 (MQ=255)
                                                                                                                     atcaGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTCCTGGCCGATGATGTGCTTATCCAGTTCGCTGACGATTTCGCGTgg                                 >  2:325813/1‑149 (MQ=255)
                                                                                                                      tcaGGATATTTTTCGGGGTCACTTCATTGCGCAGTTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTCCTGGCCGATGATGTGCTTATCCAGTTCGCTGACGATTTCGCGTggg                                <  1:106244/149‑1 (MQ=255)
                                                                                                                      tcaGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTCCTGGCCGATGATGTGCTTATCCAGTTCGCTGACGATTTCGCGTggg                                <  1:263077/149‑1 (MQ=255)
                                                                                                                       caGGATATTTTTCGGGGTCACTTCATACCGCAGCTCTTCGTTGAGCTGCATGCGACGCCATCGGTT‑‑ACGCAGAGCAATCGGCACAGAACGCTGGCCGTTGTCCTGGCCGATGATGTGCGTAACCAGTTCGCTGACGATTTCGAGTgggg                               >  2:669225/1‑149 (MQ=255)
                                                                                                                           atatTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGCCGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTCCTGGCCGATGATGTGCTTATCCAGTTCGCTGACGATTTCGCGTGGGGTCAt                           >  2:205332/1‑149 (MQ=255)
                                                                                                                            tatTTTTCGGGTTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTCCTGGCCGATGATGTGCTTATCCAGTTCGCTGACGATTTCGCGTGGGGTCAtt                          <  1:38734/149‑1 (MQ=255)
                                                                                                                             atTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTCCTGGCCGATGATGTGCTTATCCAGTTCGCTGACGATTTCGCGTGGGGTCAttt                         <  2:183467/149‑1 (MQ=255)
                                                                                                                               ttttCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTCCTGGCCGATGATGTGCTTATCCAGTTCGCTGACGATTTCGCGTGGGGTCATTTCa                       <  1:727670/149‑1 (MQ=255)
                                                                                                                                 ttCGGGGTCACTTCATGGCCCAGCCCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGAGTTGTCCTGGCCGATGATGTGCTTATCCAGTTCGCTGACGATTTCGCGTGGGGTCATTTCAGa                     <  2:939674/149‑1 (MQ=255)
                                                                                                                                 tgcGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGCGTTATCCTGGCCGATGATGTGCTTATCCAGTTCGCTGACGATTTCGCGTGGGGTCATTTCAGa                     <  1:166917/147‑1 (MQ=255)
                                                                                                                                     gggTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTCCTGGCCGAGGATGTGCTTATCCAGTTCGCTGACGATTTCGAGTGGGGTCATTTCAGACATg                 >  2:1030803/1‑149 (MQ=255)
                                                                                                                                      ggTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTCCTGGCCGATGATGTGCTTATCCAGTTCGCTGACGATTTCGCGTGGGGTCATTTCAGACATgg                <  1:157711/149‑1 (MQ=255)
                                                                                                                                        tCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCTGAGCAATCGCCACAGAACGCTTGGCGTTGTCCTGGCCGATGATGTGCTTATCCAGTTCGCTGACGATTTCGCGTGGGGTCATTTCAGACATGGga              <  1:9828/149‑1 (MQ=255)
                                                                                                                                        tCACTTCATGGCGCAGCCCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGGCCTGGCCGATGATGTGCTTATACAGTTCGCTGACGATTTCGCGTGGGGTCATTTCAGACATGGga              <  1:1032518/149‑1 (MQ=255)
                                                                                                                                            ttCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCCGAGCAATCGCCACAGAACGCTTGGCGTTGTCCTGGCCGATAATGTGCTTATCCAGTTCGCTGACGATTTCGCGTGGGGTCATTTCAGACATGGGAGAtg          >  1:5074/1‑148 (MQ=255)
                                                                                                                                            ttCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCCCCGAACGCTTGGCGTTGTCCTGGCCGATGATGTGCTTATCCAGTTCGCTGACGATTTCACGTGGGGTCATTTCAGACATGGGAGATc          >  1:504755/1‑149 (MQ=255)
                                                                                                                                            ttCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGCACGCTTGGCGTTGTCCTGGCCGATGATGTGCTTATCCAGTTCGCTGACGATTTCGCGTGGGGTCATTTCAGACATGGGAGATc          >  1:850987/1‑149 (MQ=255)
                                                                                                                                            ttCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTCCTGGCCgatga                                                                   >  2:529710/1‑92 (MQ=255)
                                                                                                                                            ttCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTCCTGGCCgatga                                                                   <  1:529710/92‑1 (MQ=255)
                                                                                                                                            ttCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTCCTGGCCGATGATGTGCTTATCCAGTTCGCTGACGATTTCGCGTGGGGTCCTTTCAGCCATGGGAGATc          >  2:416837/1‑149 (MQ=255)
                                                                                                                                            ttCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTCCTGGCCGATGATGTGCTTATCCAGTTCGCTGACGATTTCGCGTGGGGTCATTTCAGACATGGGAGATc          >  1:822952/1‑149 (MQ=255)
                                                                                                                                            ttCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTCCTGGCCGATGATGTGCTTATCCAGTTCGCTGACGATTTCGCGTGGGGTCATTTCAGACATGGGAGATc          <  1:693725/149‑1 (MQ=255)
                                                                                                                                            ttCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACACCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTCCTGGCCGATGATGTGCTTATCCAGTTCGCTGACGATTTCGCGTGGGGTCCTTTCGGACATGGgaggtg          >  2:441495/1‑146 (MQ=255)
                                                                                                                                             tCATGGCTCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTCCTGGCCGATGATGTGCTTATCCAGTTCGCTGACGATTTCGCGTGGGGTCATTTCAGACATGGGAGATcc         <  1:325813/149‑1 (MQ=255)
                                                                                                                                               aTGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTCCTGGCCGATGATGTGCTTATCCAGTTCGCTGACGATTTCGCGTGGGGTCATTTCAGACATGGGAGATCCtt       <  2:860206/149‑1 (MQ=255)
                                                                                                                                                 ggCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTCCTGGCCGATGATGTGCTTATCCAGTTCGCTGACGATTTCGCGTGGGGTCATTTCAGACATGGGAGATCCTTAc     <  1:735565/149‑1 (MQ=255)
                                                                                                                                                    gcAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAAAACGCTTGGCGTTGTCCTGGCCGATGATGTGCTTATCCAGTTCGCTGACGATTTCGCGTGGGGTCATTTCAGACATGGGAGATCCTTACGCt  >  1:606626/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                      
TTACCGACGTAGCCCACTTCGGTGAATTTGGTCGCTTCAACTTTGATGAACGGCGCATTCGCCAGCTTAGCCAGACGACGGGCGATTTCAGTTTTACCGACACCGGTCGGGCCGATCATCAGGATATTTTTCGGGGTCACTTCATGGCGCAGCTCTTCGTTGAGCTGCATGCGACGCCAGCGGTT‑‑ACGCAGAGCAATCGCCACAGAACGCTTGGCGTTGTCCTGGCCGATGATGTGCTTATCCAGTTCGCTGACGATTTCGCGTGGGGTCATTTCAGACATGGGAGATCCTTACGCT  >  NC_000913_3_pae_tpiA/4121383‑4121679

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.