New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_pae_tpiA	= 3312708	67 (1.110)	5 (0.090)	5/266	7.6	8.0%	coding (70/945 nt)	truB	tRNA pseudouridine synthase B: tRNA pseudouridine(55) synthase and putative tmRNA pseudouridine(342) synthase
	?	NC_000913_3_pae_tpiA	= 3312724	52 (0.920)					coding (54/945 nt)	truB	tRNA pseudouridine synthase B: tRNA pseudouridine(55) synthase and putative tmRNA pseudouridine(342) synthase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATCGGCAACATGCCGGTCGCCAGCGGGTCCAGCGCACCGGTATGCCCGGCACGGTTGGCGTTATATATACGTTTCACTTTTTGCAGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGTCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATG  >  NC_000913_3_pae_tpiA/3312560‑3312855                                                                                                                                                     |                                                                                                                                                    tCGGAGCCCAGCACATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATCGGCAACATGCCGGTCGCCAGCGGGTCCAGCGCACCGGTATGCCCGGCACGGTTGGCGTTATATATACGTTTCACTTTTTGCAGCGCATCGTTGCTGGa                                                                                                                                                     <  1:548386/149‑1 (MQ=255)   ggAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATCGGCAACATGCCGGTCGCCAGCGGGTCCAGCGCACCGGTATGCCCGGCACGGTTGGCGTTATATATACGTTTCACTTTTTGCAGCGCATCGTTGCTGGACa                                                                                                                                                   <  2:343378/149‑1 (MQ=255)       tCCAGCAGATACTGGGAAAACTTCGTCGCTTCCGCGAGGCAAATCGGCAACATGCCGGTCGCCGGCGGGTCAGGCGCACGGGTATGATCTGTTGTTATGTCGTTATATATACGTTTCACTTTTTGCGGGGCATCGTTGCTGGACATAca                                                                                                                                               >  1:242580/1‑148 (MQ=255)         cagcagATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATCGGCAACATGCCGGTCGCCAGCGGGTCCAGCGCACCGGTATGCCCGGCACGGTTGGCGTTATATATACGTTTCACTTTTTGCAGCGCATCGTTGCTGGACATACCCt                                                                                                                                             >  2:114712/1‑149 (MQ=255)           gcagATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATCGGCAACATGCCGGTCGCCAGCGGGTCCAGCGCACCGGTATGCCCGGCACGGTTGGCGTTATATATACGTTTCACTTTTTGCAGCGCATCGTTGCTGGACATACCCTgg                                                                                                                                           >  1:520547/1‑148 (MQ=255)               aTACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATCGGCAACATGCCGGTCGCCAGCGGGTCCAGCGCACCGGTATGCCCGGCACGGTTGGCGTTATATATACGTTTCACTTTTTGCAGCGCATCGTTGCTGGACATACCCTGAGGtt                                                                                                                                       <  2:436876/149‑1 (MQ=255)                  cTGGGCAAACTTCGTCGCTTCCCCGAGGCAAATCGGCAACATGCCGGTCGCCAGCGGGTCCAGCGCACCGGTATGCCCGGCACGGTTGGCGTTATATATACGTTTCACTTTTTGCAGCGCATCGTTGCTGGACATACCCTGAGGTTTAt                                                                                                                                    >  2:916166/1‑149 (MQ=255)                   tGGGAAAACTTCGTCGCTTCCCCGAGGCAAATCGGCAACATGCCGGTCGCCAGCGGGTCCAGCGCACCGGTATGCCCGGCACGGTTGGCGTTATATATACGTTTCACTTTTTGCAGCGCATCGTTGCTGGACATACCCTGAGGTTTATc                                                                                                                                   >  2:153552/1‑149 (MQ=255)                   ggggAAAGCTTTGTCGCTTCCCCGAGGCAAAGCGGCAACATGCCGGTCGCCAGCGGGTCCAGCGCACCGGTATGCCCGGCACGGTTGGCGTTATATATACGTTTCACTTTTTGCAGCGCATCGTTGCTGGACATACCCTGAGGTTTATc                                                                                                                                   <  2:440247/148‑1 (MQ=255)                     ggAAAGCTTCGCCGCTTCCCCGAGGCGAATCGGCAACATGCCGGGCGCCAGCGGGTCCAGCGCACCGGTATGCCCGGCACGGTTGGCGTTATATATACGTTTCACTTTTTGCAGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCa                                                                                                                                 <  2:782368/149‑1 (MQ=255)                     ggAAAACTTCGTCGCTTCCCCGAGGCAAATCGGCAACATGCCGGTCGCCAGCGGGTCCAGCGCACCGGTATGCCCGGCACGGTTGGCGTTATATATACGTTTCCCTTTTTGCAGCGCATCGTTGCTGGACATACCCTGCGGTTTTTCCa                                                                                                                                 >  2:958087/1‑149 (MQ=255)                     ggAAAACTTCGTCGCTTCCCCGAGGCAAATCGGCAACATGCCGGTCGCCAGCGGGTCCAGCGCACCGGTATGCCCGGCACGGTTGGCGTTATATATACGTTTCACTTTTTGCAGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCa                                                                                                                                 <  2:1044768/149‑1 (MQ=255)                      gAAAACTTCGTCGCTTCCCCGAGGCAAATCGGCAACATGCCGGTCGCCAGCGGGTCCAGCGCACCGGTATGCCCGGCACGGTTGGCGTTATATATACGTTTCACTTTTTGCAGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCAg                                                                                                                                <  2:936755/149‑1 (MQ=255)                            ttCGTCGCTTCCCCGAGGCAAATCGGCAACATGCCGGTCGCCAGCGGGTCCAGCGCACCGGTATGCCCGGCACGGTTGGCGTTATATATACGTTTCACTTTTTGCAGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCAGcaacaa                                                                                                                          >  1:424330/1‑149 (MQ=255)                               gtcgCTTCCCCGAGGCAAATCGGCAACATGCCGGTCGCCAGCGGGTCCAGCGCACCGGTATGCCCGGCACGGTTGGCGTTATATATACGTTTCACTTTTTGCAGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAAc                                                                                                                       >  2:534271/1‑149 (MQ=255)                                   cTTCCCCGAGGCAAATCGGCAACATGCCGGTCGCCAGCGGGTCCAGCGCACCGGTATGCCCGGCACGGTTGGCGTTATATATACGTTTCACTTTTTGCAGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCg                                                                                                                   >  2:139853/1‑149 (MQ=255)                                        ccGGGGCAAATCGGCAACCTGCCGGTCGCCAGCGGGTCCAGGGCACCGGTATGCCCGGCACGGTTGGCGTTATATATACGTTTCACTTTTTGCAGCGCATCGTTGCTGGGCATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAAt                                                                                                              <  2:257434/149‑1 (MQ=255)                                        ccGAGGCAAATCGGCAACATGCCGGTCGCCAGCGGGTCCAGCGCACCGGTATGCCCGGCACGGTTGGCGTTATATATACGTTTCACTTTTTGCAGCGCATCGTTGCTGGACATAGCCTGAGGTTTATCCAGCAACAAAACGCCGTTAAt                                                                                                              >  1:21477/1‑149 (MQ=255)                                           aGGCAAATCGGCAACATGCCGGTCGCCAGCGGGTCCAGCGCACAGGTATAAACGTCACGGTTATCGTTATATATACGTTTCACTTTTTGCAGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATTTc                                                                                                           >  2:963477/1‑149 (MQ=255)                                             gCAAATCGGCAACCTGCCGGTCGCCAGCGGGTCCAGCGCACCGGTATGCCCGGCACGGTTGGCGTTATATATACGTTTCACTTTTTGCAGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTcgc                                                                                                         <  2:390459/149‑1 (MQ=255)                                                aaccGGCAACATGCCGGTCGCCAGCCGGTCCAGCGCACCGGTATGCCCGGCACGGTTGGCGTTATATATACGTTTCACTTTTTGCAGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGCcgcgac                                                                                                      <  2:941141/146‑1 (MQ=255)                                                aaTCGGCAACATGCCGGTCGCCAGCGGGTCCAGCGCACCGGTATGCCCGGCCCGGTTGGCGATATATATACGTTTCACTTTTTGCAGCGCATCGTTGCTGGACCTACCCTGAGGTTTATCCACCAACAAAACGCCGTTAATGTcgcgac                                                                                                      >  1:228500/1‑149 (MQ=255)                                                aaTCGGCAACATCGCGGTCGCCAGGTGGTCCAGCGCACCGGTATGCCCGGCACGGTTGGCGTTATATATACGTTTCACTTTTTGCAGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTcgcgac                                                                                                      <  1:71025/149‑1 (MQ=255)                                                 aTCGGCAACATGCCGGTCGCCAGCGGGTCCAGCGCACCGGTATGCCCGGCACGGTTGGCGTTATATATACGTTTCACTTTTTGCAGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTcgcgacc                                                                                                     >  1:369567/1‑149 (MQ=255)                                                   cGGCAACATGCCGGTTGCGAGCGGGTTCAGCTCATCGGCATGCCCGGCACGGTTGGCGTTATATATACGTTTCACTTTTTGCAGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTcgcgaccgc                                                                                                   <  1:279977/149‑1 (MQ=255)                                                           tGCCGGTCGCCAGCGGGTCCAGCGCACCGGTATGCCCGGCACGGTTGGCGTTATATATACGTTTCACTTTTTGCAGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGcgacgacga                                                                                           <  1:139853/149‑1 (MQ=255)                                                            gCCGGTCGCCAGCGGGTCCAGCGCACCGGTATGCCCGGCACGGTTGGCGTTATATATACGTTTCACTTTTTGCAGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAg                                                                                          <  1:170561/149‑1 (MQ=255)                                                             ccGGTCGGAAGCGGGTCCAGCGCACCGGTCTGCCCGGCACGGTTGGCGTTATATATACGTTTCACTTTTTGCAGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAgg                                                                                         <  2:872581/149‑1 (MQ=255)                                                                   gCCAGCGGGTCCAGCGCACCGGTATGCCCGGCACGGTTGGCGTTATATATACGTTTCACTTTTTGCAGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACt                                                                                   <  2:424330/149‑1 (MQ=255)                                                                    ccAGCGGGTCCAGCGCACCGGTATGCCCGGCACGGTTGGCGTTATATATACGTTTCACTTTTTGCAGCGCATCGTTGCTGGACATACCCTGTGGTTTAGCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGTCGGCtt                                                                                  <  2:130212/149‑2 (MQ=255)                                                                     cAGCGGGTCCAGCGCACCGGTATGCCCGGCACGGTTGGCGTTATATATACGTTTCACTTTTTGCAGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCa                                                                                                                                 >  2:923527/1‑101 (MQ=255)                                                                     cAGCGGGTCCAGCGCACCGGTATGCCCGGCACGGTTGGCGTTATATATACGTTTCACTTTTTGCAGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCa                                                                                                                                 <  1:923527/101‑1 (MQ=255)                                                                     cAGCGGGTCCAGCGCACCGGTATGCCCGGCACGGTTGGCGTTATATATACGTTTCACTTTTTGCAGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCTACGACGAGGACGACTCa                                                                                 >  1:685169/1‑149 (MQ=255)                                                                      aGCGGGTCCAGCGCACCGGTATGCCCGGCACGGTTGGCGTTATATATACGTTTCACTTTTTGCAGCGCATCGTTGCTGGACATCCCCCGATGTTTAGCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCAt                                                                                <  1:729862/149‑1 (MQ=255)                                                                        cGGGTCCAGCGCACCGGTATGCCCGGCACGGTTGGCGTTATATATACGTTTCACTTTTTGCAGCGCATCGTTGCTGGACATCCCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTa                                                                              <  1:71227/149‑1 (MQ=255)                                                                        cGGGTCCAGCGCACCGGTATGCCCGGCACGGTTGGCGTTATATATACGTTTCACTTTTTGCAGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTa                                                                              <  2:650315/149‑1 (MQ=255)                                                                        cGGGTCCAGCGCACCGGTATGCCCGGCACGGTTGGCGTTATATATACGTTTCACTTTTTGCAGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTa                                                                              <  1:746252/149‑1 (MQ=255)                                                                        cGGGTCCAGCGCACCGGTATGCCCGGCACGGTTGGCGTTATATATACGTTTCACTTTTTGCAGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTa                                                                              <  1:909428/149‑1 (MQ=255)                                                                         gggTCCAGCGCACTGGTATGCCCGGCACGGTTGGCGTTATATATACGTTTCACTTTTTGCAGCGCATCGTTGCTGGACATACTCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAg                                                                             <  2:43302/149‑1 (MQ=255)                                                                           gTCCAGCGCACCGGTATGCCCGGCACGGTTGGCGTTATATATACGTTTCACTTTTTGCAGCTCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGCGGACGAGGAAGACTCATTAGtc                                                                           >  2:101055/1‑149 (MQ=255)                                                                             cgaGCGAACCGGTGTGCCCGGCACGGTGGTCGTTATATATACGTTTCACTTTTTCCAGCGCATCGTTGCTGGACACACCCTGAGGTTTATCCAGCAACAAAACGTCGTTAATGTCGCGCCCGCGACGACGAGGACGACTCATTAGtcct                                                                         <  2:290495/147‑1 (MQ=255)                                                                              cAGCGCACCGGTATGCCCGGCACGGTTGGCGTTATATATACGTTTCACTTTTTGCAGCGCATCGTTGCTGGACATACCCTGAgg                                                                                                                                         >  1:720113/1‑84 (MQ=255)                                                                              cAGCGCACCGGTATGCCCGGCACGGTTGGCGTTATATATACGTTTCACTTTTTGCAGCGCATCGTTGCTGGACATACCCTGAgg                                                                                                                                         <  2:720113/84‑1 (MQ=255)                                                                               aGCGCACCGGTATGCCCGGCACGGTTGGCGTTATATATACGTTTCACTTTTTGCAGCGCATCGTTGCTGGACATAc                                                                                                                                                <  1:143154/76‑1 (MQ=255)                                                                               aGCGCACCGGTATGCCCGGCACGGTTGGCGTTATATATACGTTTCACTTTTTGCAGCGCATCGTTGCTGGACATAc                                                                                                                                                >  2:143154/1‑76 (MQ=255)                                                                                gcgcACCGGTATGCCCGGCACGGTTGGCGTTATATATACGTTTCACTTTTTGCAGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGTcctcct                                                                      >  2:531700/1‑149 (MQ=255)                                                                                gcgcACCGGTATGCCCGGCACGGTTGGCGTTATATATACGTTTCACTTTTTGCAGCGCATCGTTGCTGGACATACCCTGAGGTTGATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGTcctcct                                                                      <  1:916166/149‑1 (MQ=255)                                                                                  gcACCGGTATGCCCGGCACGGTTGGCGTTATATATACGTTTCACTTTTTGCAGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGTCCTCCTTg                                                                    <  1:531700/149‑1 (MQ=255)                                                                                   cACCGGTATGCCCGGCACGGTTGGCGTTATATATACGTTTCACTTTTTGCAGCGCATCGTTGATCGCCATACCCTGAGGTTGAACCAGCAACAAAACGCCGTTACTGTCGCGACCGCGACGACGAGGACGCCTCATTATTCCTGCTTGc                                                                   >  1:510241/1‑149 (MQ=255)                                                                                    cccGGTAGGTCCGGCACGGTTGGCGTTATATATCCGTTTCACTTTTTGCAGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGTCCTCCTTGCt                                                                  <  1:83811/148‑1 (MQ=255)                                                                                     ccGGTATGCCCGGCACGGTTGGCGTTATATATACGTTTCACTTTTTGCAGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGTCCTCCTTGCTg                                                                 <  2:191953/149‑1 (MQ=255)                                                                                                   aCGGTTGGCGTTATATATACGGTTCACTTTTTGCAGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGTCCTCCTTGCTGTCGTCCGGGTTAac                                                   <  2:1052563/149‑1 (MQ=255)                                                                                                     ggTTGGCGTTATATATACGTTTCACTTTTTGCAGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGTCCTCCTTGCTGTCGTCCGGGTTAacac                                                 >  1:703761/1‑149 (MQ=255)                                                                                                               atatataCGTTTCACTTTTTGCAGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGcgacgacga                                                                                           <  2:957554/97‑1 (MQ=255)                                                                                                               atatataCGTTTCACTTTTTGCAGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGcgacgacga                                                                                           >  1:957554/1‑97 (MQ=255)                                                                                                                    tccGTTTCACTTTTGGCAGCGCATCGTTGATGGACATCCCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGTCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCAt                                  <  2:986415/147‑1 (MQ=255)                                                                                                                    taCGTTTCACTTTTTGCAGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGTCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCAt                                  >  2:384651/1‑149 (MQ=255)                                                                                                                          taaCTTTTTGCATCGCATCGTTGCTGGACATCCCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATTTCGCGACCGTGACGACGAGGACGACTGATTAGTCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGCTTGa                            <  2:448420/147‑1 (MQ=255)                                                                                                                                  tGCAGGTCATCGTTGCTGGACGTACCCTGAGGTTTAGCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGTCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTg                    <  1:958087/149‑1 (MQ=255)                                                                                                                                  tGCAGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGTCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTg                    <  2:144254/149‑1 (MQ=255)                                                                                                                                  tGCAGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGTCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTg                    <  1:307541/149‑1 (MQ=255)                                                                                                                                    cagcgcagcgTTGCTGGACATACCCTGAGGTTTACCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGTCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGt                  <  2:297271/149‑1 (MQ=255)                                                                                                                                      gcgcATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGTCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCa                >  2:908910/1‑149 (MQ=255)                                                                                                                                         cATCGGTGCTGGAAATGCGCTGATGTTGGTCCAGCAAGAAAACGCCGTTTATGTCGCGGGCGGGACGGCGTGGACGGCTCATTAGTCCTCCTTGCTGTCGTCCGGGTTAGCACGTCGTTTTTCGTCATGTTTGACCACGCTGGTCACCa             <  2:407355/149‑1 (MQ=255)                                                                                                                                          aTCGTTGCTGGAAATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGTCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAg            <  1:153552/149‑1 (MQ=255)                                                                                                                                            cGTTGCTGGACATTCGGTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGTCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGt          <  2:1025065/149‑1 (MQ=255)                                                                                                                                                  tGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACACATTAGTCCTCCTTGCTGTCGTCCGGGTTCACACCACGTTCTTCGTCATGTTTCACCCCGCTGCTCACCAGGTTTggcc    >  2:869010/1‑146 (MQ=255)                                                                                                                                                    gACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGTCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATg  <  1:114712/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                    TCGGAGTCCAGCAGATACTGGGAAAACTTCGTCGCTTCCCCGAGGCAAATCGGCAACATGCCGGTCGCCAGCGGGTCCAGCGCACCGGTATGCCCGGCACGGTTGGCGTTATATATACGTTTCACTTTTTGCAGCGCATCGTTGCTGGACATACCCTGAGGTTTATCCAGCAACAAAACGCCGTTAATGTCGCGACCGCGACGACGAGGACGACTCATTAGTCCTCCTTGCTGTCGTCCGGGTTAACACGACGTTCTTCGTCATGTTTGACCACGCTGGTCACCAGGTTTGACATG  >  NC_000913_3_pae_tpiA/3312560‑3312855

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.