| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_pae_tpiA | = 3792764 | 88 (1.070) | 5 (0.070) | 5/262 | 6.7 | 5.6% | intergenic (‑213/+62) | kbl/yibB | glycine C‑acetyltransferase/YibB family protein, function unknown |
| ? | NC_000913_3_pae_tpiA | = 3792768 | 86 (1.130) | intergenic (‑217/+58) | kbl/yibB | glycine C‑acetyltransferase/YibB family protein, function unknown | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GACGAGATAACGCGTTAACACTTCTGCAAAATTCAGGATAAATA‑ACGTGTAACTTGATGTCTCTCAACACCTACAGATAGTAGAAAAACTGTACAGTTTTGGCTGGGCATAATGATGATTGATTTTACTGCATTGATATAAAAAGAAAAAATGATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913_3_pae_tpiA/3792608‑3792764‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaaatgatgcTTTGGCATCATTTTTTCTTTTTATATCAATGCAGTAAAATCAATCATCATTATGCCCAGCCAAAACTGTACAGTTTTTCTACTATCTGTAGGTGTTGAGAGACATCAAGTTACACGTTATTTATCCTGAATTTTGCAGAAGTGTTAA < NC_000913_3_pae_tpiA/3792768‑3792622 GACGAGATAACGCGTTAACACTTCTGCAAAATTCAGGATAAATA‑ACGTGTAACTTGATGTCTCTCAACACCTACAGATAGTAGAAAAACTGTACAGTTTTGGCTGGGCATAATGATGATTGATTTTACTGCATTGATATAAAAAGAAAA > 1:722055/1‑149 GAGATAACGCTTTAACACTCCTGCAAAATTCAGGATAAAAACATTAGTAA‑TTGATGTCTCTCAACACCTACAGATAGTAGAAAAACTGTACAGTTTTGGCTGGGCATAATGATGATTGATTTTACTGCATTGATATAAAAAGAAAAAAT < 2:875243/149‑1 GAGATAACGCGTTAACACTTCTGCAAAATTCAGGATAAATA‑ACGTGTAACTTGATGTCTCTCAACACCTACAGATAGTAGAAAAACTGTACAGTTTTGGCTGGGCATAATGATGATTGATTTTACTGCATTGATATAAAAAGAAAAAAT > 1:664202/1‑149 GAGATAACGCGTTAACACTTCTGCAAAATTCAGGATAAATA‑ACGTGTAACTTGAAGTCTCTCAACACCTACAGATAGTAGAAAAACTGTACAGTTTTGGCTGGGCATAATGATGATTGATTTTACTGCATTGATATAAAAAGAAAAAAT < 2:396736/149‑1 ATAACGCGTTAACACTTCTGCAAAATTCAGGATAAATA‑ACGTGTAACTTGATGTCTCTCAACACCTACAGATAGTAGAAAAACTGTACAGTTTTGGCTGGGCATAATGATGATTGATTTTACTGCATTGATATAAAAAGAAAAAATGAT > 2:1178837/1‑149 ATAACCCGTTACCTCTTCTACAAAATTATGGATAATTA‑CCGTGTAACTTGATGTTTCTCAACACCTACCGATCGTAGAAAAACTGTACAGTTTTGGCTGGGCATAAGGATGATTGATTTTACTGCATTGATATAAAAAGAAAAAATGAT < 1:1382971/149‑1 AACGCGTTAACACTTCTGCAAAATTCAGGATAAATA‑ACGTGTAACTTGATGTCTCTCAACACCTACAGATAGTAGAAAAACTGTACAGTTTTGGCTGGGCATACTGATGATTGATTTTACTGCATTGATCTAAAAACAAAAAATGATGC > 2:718775/1‑149 TAACACTTCTGCAAAATTCAGGATAAATA‑ACGTGTAACTTGATGTCTCTCAACACCTACAGATAGTCGAGAAACTGTACAGTTTTGGCTGGGCATAATGATGATTGATTTTACTGCCTTGATATAAAAAGAAAAAATGATGCgaaatca > 1:343406/1‑142 TCTGCAAAAGTCAGGATAAACC‑ACGTGAAACTGGATGTCTCTCAACACTTACAGATAGTAGAAAAACTGTACAGTTTTGGCTGGGCATAATGATGATTGATTTTACTGCATTGATATAAAAAGAAAAAATGATGCTTTGGCATCATTTT < 1:753849/149‑1 TA‑ACGTGTAACTTGATGTCTCTCAACACCTACAGATAGTAGAAAAACTGTACAGTTTTGGCTGGGCATAATGATGATTGATTTTACTGCATTGATATAAAAAGAAAAAATGATGCTTTGGCATCATTTTTTCTTTTTATATCAATGCAG > 1:778925/1‑149 TCAACACCTAAAGATAGGAAAAAAGCAGTGAATGTTTGGCTGTGCATTATGATGATTGATTTTAATGCATTGATATAAAAAGAAAAAATGATGCTTTGGCAGCATTTTTTCTTTTTATATCAATGCAGTAAAATCAATCATCATTATGC < 1:1238389/149‑1 AACACCTACAGATAGTAGAAAAACTGTACAGTTTTGGCTGGGCATAATGATGATTGATTTTACTGCATTGATATAAAAAGAAAAAA < 1:120772/86‑1 AACACCTACAGATAGTAGAAAAACTGTACAGTTTTGGCTGGGCATAATGATGATTGATTTTACTGCATTGATATAAAAAGAAAAAA > 2:120772/1‑86 ACCTACAGATAGTAGAAAAACTGTACAGTTTTGGCTGGGCATAATGATGATTGATTTTACTGCATTGATATAAAAAGAAAAAATGATGCTTTGGCATCATTTTTTCTTTTTATATCAATGCAGTAAAATCAATCATCATTATGCCCAGC < 2:778925/149‑1 tAGAAAAAAAGAAGTTTTGGCATCATTTTTTCTTTTTAGATCAATGCAGTAAAATCAATCATCATTATGCCCAGCCAAAACTGTACAGTTTTTCTACTATCTGTAGGTGTTGAGAGACATCAAGTTACACGTTATTTATCCTGAATTTT < 2:1259998/148‑1 AAATGATGCTTTGGCATCATTTTTTCTTTTTATATCAATGCAGTAAAATCAATAATCATTATGCCCAGCCAAAACTGTACAGTTTTTCTACTATCTTTAGGTGTTGAGATACATCAAGTTACACGTTATTTATCCTTAATTTTGCAtga > 2:608112/1‑146 GATGCTTTGGCATCATTTTTTCTTTTTATATCAATGCAGTAAAATCAATCATCATTATGCCCAGCCAAAACTGTACAGTTTTTCTACTATCTGTAGCTGTTGAGAGACATCAAGTTACACGTTATTTATCATGAATATTGAAGAAGTGT > 1:166300/1‑149 GCTTTGGCATCATTTTTTCTTTTTATATCAATGCAGTAAAATCAATCATCATTATGCCCAGCCAAAACTGTACAGTTTTTCTACTATCTGTAGGTGTTGAGAGACATCAAGTTACACGTTATTTATCCTGAATTTTGCAGAAGTGTTAA < 2:366175/149‑1 GACGAGATAACGCGTTAACACTTCTGCAAAATTCAGGATAAATA‑ACGTGTAACTTGATGTCTCTCAACACCTACAGATAGTAGAAAAACTGTACAGTTTTGGCTGGGCATAATGATGATTGATTTTACTGCATTGATATAAAAAGAAAAAATGATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913_3_pae_tpiA/3792608‑3792764‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaaatgatgcTTTGGCATCATTTTTTCTTTTTATATCAATGCAGTAAAATCAATCATCATTATGCCCAGCCAAAACTGTACAGTTTTTCTACTATCTGTAGGTGTTGAGAGACATCAAGTTACACGTTATTTATCCTGAATTTTGCAGAAGTGTTAA < NC_000913_3_pae_tpiA/3792768‑3792622 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |