BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_pae_tpiA	= 3909983	1 (0.010)	99 (1.270)	80/270	0.0	99.0%	coding (416/960 nt)	pstC	phosphate ABC transporter permease
*	?	NC_000913_3_pae_tpiA	3910137 =	1 (0.010)	99 (1.270)	80/270	0.0	99.0%	coding (262/960 nt)	pstC	phosphate ABC transporter permease

Only 100 of 111 total aligned reads displayed.

ACGCATTACCGCCGCAATGTACGGAATAATCATGATGGCGAGGATCACGCCTGCCGCGAGGATACCGATACCAAATGCGGGGCCAGAGAACAGCGCGCCAACAATCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913_3_pae_tpiA/3909829‑3909983

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGAATGCTCGGCCAGGAGGAGATGATCAGAGAGA  >  NC_000913_3_pae_tpiA/3910137‑3910283

gcgccgTACCGGCGCAGTGTACGGAATAATGATGATGGCGAGGATCACGCCTGCCGCGAGGATACCGATACCAAAGGCGGGGCCAGAGAACAGCGCGCCAACAATCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAA                                                                                                                                                           <  2:1297516/143‑1

ACGCATTACCGCCGCAATGTACGGAATAATCATGATGGCGAGGATCACGCCTGCCGCGAGGATACCGATACCAAATGCGGGGCCAGAGAACAGCGCGCCAACAAGCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAA                                                                                                                                                           <  1:1078825/149‑1

       ACCGCCGCAATGTACGGAATAATCATGATGGCGAGGATCACGCCTGCCGCGAGGATACCGATACCAAATGCGGGGCCAGAGAACAGCGCGCCAACAATCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGAT                                                                                                                                                    >  1:132415/1‑149

        cccaCGCAATGTCCGGAACAATCATCGTGGCGAGGATCACGCCTGCCGCGAGGATACCGATACCAAATGCGGGGCCAGAGAACAGCGCGCCAACAATCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATC                                                                                                                                                   <  1:337901/145‑1

        CCGCCGCAATGTACGGAATAATCATGATGGCGAGGATCACGCCTGCCGCGAGGATACCGATACCAAATGCGGGGCCAGAGAACAGCGCGCCAACAATCGGGATATTCGACCTGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATC                                                                                                                                                   >  1:674307/1‑149

          GCCGCAATGTACGGAATAATCATGATGGCGAGGATCACGCCTGCCGCGAGGATACCGATACCAAATGCGGGGCCAGAGAACAGCGCGCCAACAATCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAG                                                                                                                                                 >  1:687704/1‑149

          GCCGCAATGTACGGAATAATCATGATGGCGAGGATCACGCCTGCCGCGAGGATACCGATACCAAATGCGGGGCCAGAGAACAGCGCGCCAACAATCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAG                                                                                                                                                 <  1:547949/149‑1

           CCGCAATGTACGGAATAATCATGATGGCGAGGATCACGCCTGCCGCGAGGATACCGATACCAAATGCGGGGCCAGAGAACAGCGCGCCAACAATCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGC                                                                                                                                                >  1:153032/1‑149

              gAATGTACGGAATAATCATGATGGCGAGGATCACGCCTGCCGCGAGGATACCGATACCAAATGCGGGGCCAGAGAACAGCGCGCCAACAATCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGC                                                                                                                                             <  2:813183/148‑1

                    ACGGAATAATCATGATGGCGAGGATCACGCCTGCCGCGAGGATACCGATACCAAATGCGGGGCCAGAGAACAGCGCGCCAACAATCGGGATATTCGACATGATATTGCCGACCGGCTACTGAAAGTAAACGGCGATCAGCAGCGCGATA                                                                                                                                       >  1:861593/1‑149

                       GAATAATCATGATGGCGAGGATCACGCCTGCCGCGAGGATACCGATACCAAATGCGGGGCCAGAGAACAGCGCGCCAACAATCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAAC                                                                                                                                    >  1:573430/1‑149

                       GAATAATCATGATGGCGAGGATCACGCCTGCCGCGAGGATACCGATACCAAATGCGGGGCCAGAGAACAGCGCGCCAACAATCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAAC                                                                                                                                    <  2:573430/149‑1

                        AATAATCATGATGGCGAGGATCACGCCTGCCGCGAGGATACCGATACCAAATGCGGGGCCAGAGAACAGCGCGCCAACAATCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTCAACGGCGATCAGCAGCGCGATAAACa                                                                                                                                   >  1:210690/1‑148

                         ATAATCATGATGGCGAGGATCACGCCTGCCGCGAGGATACCGATACCAAATGCGGGGCCAGAGAACAGCGCGCCAACAATCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGA                                                                                                                                  <  1:831164/149‑1

                         ATAATCATGATGGCGAGGATCACGCCTGCCGCGAGGATACCGATACCAAATGCGGGGCCAGAGAACAGCGCGCCAACAATCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGA                                                                                                                                  <  1:831768/149‑1

                            ATCATGATGGCGAGGATCACGCCTGCCGCGAGGATACCGATACCAAATGCGGGGCCAGAGAACAGCGCGCCAACAATCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGT                                                                                                                               >  2:723467/1‑149

                             TCATGATGGCGAGGATCACGCCTGCCGCGAGGATACCGATACCAAATGCGGGGCCAGAGAACAGCGCGCCAACAATCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTC                                                                                                                              <  2:687704/149‑1

                              CATGATGGCGAGGATCACGCCTGCCGCGAGGATACCGATACCACATGCGGAGCCAGAGAACAGCGCGGCAACAAGCGGGATATTCGACATGACATTGCCGACCGGCTCCTGAAAATAAACGGGGATCACCCGCGCGATAAAAGAcggcc                                                                                                                             >  2:167866/1‑144

                                  acGGCGAGGATCACGCCTACCGCGAGTGTACCGATACCAAATGCGGGGCCAGAGAACAGCGCGCCAACAATCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAA                                                                                                                         <  1:624215/147‑1

                                          GATCACGCCTGCCGCGAGGATACCGATACCAAATGCGGGGCCAGAGAACAGCGCGCCAACAATCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGT                                                                                                                 >  1:288876/1‑149

                                           ATCGCGCCTGGCGGGGGGATACCGGTGCCAAATGCGGGGCCAGAGAACAGCGCGCCAACAATCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTA                                                                                                                <  2:523610/149‑1

                                               CGCCTGCCGCGAGGATACCGATACCAAATGCGGGGCCAGAGAACAGCGCGCCAACAATCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTCCCGTAGATC                                                                                                            >  1:1115881/1‑149

                                                GCCTGCCGCGAGGATACCGATACCAAATGCGGGGCCAGAGAACAGCGCGCCAACAATCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCG                                                                                                           >  1:1266510/1‑149

                                                  atgcggaGAGGATACCGATACCAGATGCGGGGGCAGAGTATAGGGCGTTAAGAATCGGGATATTCGGCATGATATTGCGGACCGGTTCCTGAAAGTAAACGGCGATCAGCAGCGCGATCAACGAAGTCACCAACGTACCGTAGATCGGC                                                                                                         <  2:1046041/142‑1

                                                      CGCGAGGATACCGATACCAAATGCGGGGCCAGAGAACAGCGCGCCAACAATCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCA                                                                                                     >  1:744516/1‑149

                                                         GAGGATACCGATACCAAATGCGGGGCCAGAGAACAGCGCGACAACAATCGGGGTATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCGGCG                                                                                                  >  2:326320/1‑149

                                                            GATACCGATACCATAGGCGGGGCCAGAGAACCGCGCGCCAACAATCGGGCCATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCC                                                                                               <  1:380222/149‑1

                                                            GATACCGATACCAAATGCGGGGCCAGAGAACAGCGCGCCAACAATCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCC                                                                                               >  2:896996/1‑149

                                                               ACCGATACCAAATGCGGGGCCAGAGAACAGCGCGCCAACAATCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGT                                                                                            <  1:720053/149‑1

                                                               ACCGATACCAAATGCGGGGCCAGAGAACAGCGCGCCAACAATCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGACCGGCACCAGCGCCCCGT                                                                                            >  1:130369/1‑149

                                                                CCGATACCAAATGCGGGGCCAGAGAACAGCGCGCCAACAATCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTA                                                                                           <  1:1280243/149‑1

                                                                  GATACCAAATGCGGGGCCAGAGAACAGCGCGCCAACAATCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGA                                                                                                                                         <  2:1222742/101‑1

                                                                   ATACCAAAGGCGGGGCCAGAGAACAGCGCGCCAACAACCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGAT                                                                                        <  1:1157419/149‑1

                                                                       CAAATGCGGGGCCAGAGAACAGCGCGCCAACAATCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCG                                                                                    >  1:441726/1‑149

                                                                        AAATGCGGGGCCAGAGAACAGCGCGCCAACAATCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGGTAAACGAAGTCACCAACGTCCCGTAGATCGGCACCAGCGCCCCGTAGATATCGT                                                                                   >  1:1275699/1‑149

                                                                        AAATGCGGGGCCAGAGAACAGCGCGCCAACAATCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGT                                                                                   <  2:826491/149‑1

                                                                             CGGGGCCAGAGAACGGCGCGCCAACAATCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGT                                                                              <  1:1026588/149‑1

                                                                                  CCAGAGAACAGCGCGCCAACAATCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTC                                                                                                                              >  2:752136/1‑96

                                                                                  CCAGAGAACAGCGCGCCAACAATCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGG                                                                                                                                                        <  2:1035209/70‑1

                                                                                  CCAGAGAACAGCGCGCCAACAATCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGG                                                                                                                                                        >  1:1035209/1‑70

                                                                                   CAGAGAACAGCGCGCCAACAATCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCC                                                                        >  1:748314/1‑149

                                                                                   CAGAGAACAGCGCGCCAACAATCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCA                                                                                                                             >  1:112047/1‑96

                                                                                   CAGAGAACAGCGCGCCAACAATCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCA                                                                                                                             <  2:112047/96‑1

                                                                                          CAGCGCGCCAACAATCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTT                                                                 <  1:68357/149‑1

                                                                                           AGCGCGACAACAATCGGTATGTTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTT                                                                >  2:1073542/1‑149

                                                                                            GCGCGCCAACAATCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTG                                                               <  1:1150372/149‑1

                                                                                                GCCAACAATCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCA                                                                                                                                                  >  1:918161/1‑62

                                                                                                GCCAACAATCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCA                                                                                                                                                  <  2:918161/62‑1

                                                                                                 CCAACAATCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCG                                                                                <  2:584251/127‑1

                                                                                                 CCAACAATCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCG                                                                                >  1:584251/1‑127

                                                                                                   AACAATCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATA                                                        >  1:434883/1‑149

                                                                                                    ACAATCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAG                                                       <  1:723467/149‑1

                                                                                                       ATCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCCACAGCGCCCCGTAGGTATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAA                                                    >  1:475063/1‑149

                                                                                                       ATCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAA                                                    >  1:475073/1‑149

                                                                                                       ATCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAA                                                    >  2:447719/1‑149

                                                                                                          GGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGC                                                 <  1:960879/149‑1

                                                                                                           GGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGT                                                                              <  2:381307/119‑1

                                                                                                            cagtTTCGACATGATATTGCCGCCCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGCTATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCA                                               <  2:1060181/145‑1

                                                                                                            GATATGCGACATGATATTGACTACCGGCTTCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTGCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCA                                               <  1:565059/149‑1

                                                                                                             ATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAG                                              <  1:1016438/149‑1

                                                                                                              TATTCAACATGATATTGCCGACCGGCCCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGA                                             <  1:356649/149‑1

                                                                                                                     CATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCCTCCCACTCTTTGGTCCATAGGAAACCCAGACCAAATT                                      >  2:1280601/1‑149

                                                                                                                        GATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCTGACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCT                                   <  2:674307/149‑1

                                                                                                                        GATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCT                                   <  1:896996/149‑1

                                                                                                                        GATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCT                                   <  1:379463/149‑1

                                                                                                                        GATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACACTTTGGTCCATAGGAAAGCCCGACCAACTTTCT                                   >  2:343369/1‑149

                                                                                                                         ATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGT                                                                              >  2:1042694/1‑105

                                                                                                                         ATATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGT                                                                              <  1:1042694/105‑1

                                                                                                                           ATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGA                                 <  2:782840/148‑1

                                                                                                                           ATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGA                                 >  1:782840/1‑148

                                                                                                                           ATTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCACGATAAACGAAGTCACCCCAGACCTGGAGTTCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTCTGGTCCATAGGAAAGCCAGACCAAATTTCTGAA                                <  1:1061728/149‑1

                                                                                                                            TTGCCGACCGGCTCCTGAAAGTAAACGGCGATCGGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGAACGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGAACAAATTTCTGAAT                               >  2:913031/1‑149

                                                                                                                            TTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGAAT                               >  2:1139297/1‑149

                                                                                                                            TTGCCGACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGAAT                               <  2:405653/149‑1

                                                                                                                                 GACCGGCTCCTGAAAGTAAACGGCGATAGACAGTACAATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGAATGCTCG                          >  1:348724/1‑149

                                                                                                                                  ACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGCTAAACGCAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCGTCCCACTCTTTGGCCCATAGGAAAGCCCGACCCAATTTCTGAATGCTCGG                         >  1:85786/1‑149

                                                                                                                                  ACCGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGAATGCTCGG                         >  1:85916/1‑149

                                                                                                                                    CGGCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGAATGCTCGGCC                       >  1:843236/1‑149

                                                                                                                                      gccccgaAAAGTCAACGGCAATCACCAGCCCCATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTGCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGAATGCTCGGCCAG                     <  1:326320/142‑1

                                                                                                                                      GCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCTATAGGAAAGCCAGACCAAATTTCTGAATGCTCGGCCAG                     <  2:1266510/149‑1

                                                                                                                                      GCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTT                                                                                  <  2:435255/88‑1

                                                                                                                                      GCTCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTT                                                                                  >  1:435255/1‑88

                                                                                                                                        TCCTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCCCCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGAATGCTCGGCCAGGA                   <  1:918310/149‑1

                                                                                                                                          CTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGAATGCTCGGCCAGGGGG                 >  1:792948/1‑149

                                                                                                                                          CTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGAATGCTCGGCCAGGAGG                 >  1:1392427/1‑149

                                                                                                                                          CTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGAATGCTCGGCCAGGAGG                 <  1:1396163/149‑1

                                                                                                                                          CTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGT                                                             >  2:882919/1‑105

                                                                                                                                          CTGAAAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGT                                                             <  1:882919/105‑1

                                                                                                                                              AAGTAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGAATGCTCGGCCAGGAGGAGAT             >  1:1404164/1‑149

                                                                                                                                                 TAAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGAATGCTCGGCCAGGAGGAGATGAT          >  2:1296383/1‑149

                                                                                                                                                  cAACGCCGAGCAGCAGCGCGATAAACGAAGTCACCAACGTCCCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGAATGCTCGGCCAGGAGGAGATGATC         <  2:60062/148‑1

                                                                                                                                                  AAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGAATGCTCGGCCAGGAGGAGATGATC         <  2:1392427/149‑1

                                                                                                                                                  AAACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGACCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGAGTGCTCGGCCAGGAGGAGATGATC         >  2:745213/1‑149

                                                                                                                                                     CGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGAATGCTCGGCCAGGAGGAGATGATCAGA      <  1:573125/149‑1

                                                                                                                                                      GGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAACTTCTGGTTGACCGGCCAGGAAGCGAACATCAGAt     >  2:424424/1‑148

                                                                                                                                                       GCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGAGCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCT                                   >  1:930854/1‑118

                                                                                                                                                       GCGATCAGCAGAGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGAATGCTCGGCCAGGAGGAGATGATCAGAGA    <  1:213319/149‑1

                                                                                                                                                         GATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGAATGGTCGGCCAGGAGGAGATGATCAGAGAGA  >  2:1436381/1‑149

                                                                                                                                                         GATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGAATGCTCGGCCAGGAGGAGATGATCAGAGAGA  <  2:288876/149‑1

                                                                                                                                                         GATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGAATGCTCGGCCAGGAGGAGATGATCAGAGAGA  <  2:1404164/149‑1

ACGCATTACCGCCGCAATGTACGGAATAATCATGATGGCGAGGATCACGCCTGCCGCGAGGATACCGATACCAAATGCGGGGCCAGAGAACAGCGCGCCAACAATCGGGATATTCGACATGATATTGCCGACCGGCTCCTGAAAGTAAACGGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913_3_pae_tpiA/3909829‑3909983

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGAATGCTCGGCCAGGAGGAGATGATCAGAGAGA  >  NC_000913_3_pae_tpiA/3910137‑3910283

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.