New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_pae_tpiA = 39099831 (0.010)99 (1.270) 80/270 0.0 99.0% coding (416/960 nt) pstC phosphate ABC transporter permease
?NC_000913_3_pae_tpiA 3910137 = 1 (0.010)coding (262/960 nt) pstC phosphate ABC transporter permease

Only 100 of 108 total aligned reads displayed.

GCGCAAAGATAAACAGGCCCCACATGCCGTAAACGATACTTGGAATGGCTGCCAGCAGCTCAATGGCGATACCCAGCGGGCGTTTCAGCCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGAATGCTCGGCCAGGAGGAGATGATCAGAGAGA  >  NC_000913_3_pae_tpiA/3909990‑3910283
                                                                                                                                                   |                                                                                                                                                  
ccgccgcaatgtacggaataatcatgatggcgaggatcacgcctgccgcgaggataccgataccaaatgcggggccagagaacagcgcgccaacaatcgggatattcgacctgatattgccgaccggctcctgaaagtaaacggcgaTc                                                                                                                                                   >  1:674307‑M2/148‑149 (MQ=255)
cccacgcaatgtccggaacaatcatcgtggcgaggatcacgcctgccgcgaggataccgataccaaatgcggggccagagaacagcgcgccaacaatcgggatattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTc                                                                                                                                                   <  1:337901‑M2/2‑1 (MQ=255)
 cgccgcaatgtacggaataatcatgatggcgaggatcacgcctgccgcgaggataccgataccaaatgcggggccagagaacagcgcgccaacaatcgggatattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTca                                                                                                                                                  >  2:1061728‑M2/147‑149 (MQ=255)
  gccgcaatgtacggaataatcatgatggcgaggatcacgcctgccgcgaggataccgataccaaatgcggggccagagaacagcgcgccaacaatcgggatattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTcag                                                                                                                                                 <  1:547949‑M2/4‑1 (MQ=255)
  gccgcaatgtacggaataatcatgatggcgaggatcacgcctgccgcgaggataccgataccaaatgcggggccagagaacagcgcgccaacaatcgggatattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTcag                                                                                                                                                 >  1:687704‑M2/146‑149 (MQ=255)
   ccgcaatgtacggaataatcatgatggcgaggatcacgcctgccgcgaggataccgataccaaatgcggggccagagaacagcgcgccaacaatcgggatattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTcagc                                                                                                                                                >  1:153032‑M2/145‑149 (MQ=255)
      gaatgtacggaataatcatgatggcgaggatcacgcctgccgcgaggataccgataccaaatgcggggccagagaacagcgcgccaacaatcgggatattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTCagcagc                                                                                                                                             <  2:813183‑M2/8‑1 (MQ=255)
            acggaataatcatgatggcgaggatcacgcctgccgcgaggataccgataccaaatgcggggccagagaacagcgcgccaacaatcgggatattcgacatgatattgccgaccggctactgaaagtaaacggcgaTCAGCAGCGCGATa                                                                                                                                       >  1:861593‑M2/136‑149 (MQ=255)
               gaataatcatgatggcgaggatcacgcctgccgcgaggataccgataccaaatgcggggccagagaacagcgcgccaacaatcgggatattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAAc                                                                                                                                    >  1:573430‑M2/133‑149 (MQ=255)
               gaataatcatgatggcgaggatcacgcctgccgcgaggataccgataccaaatgcggggccagagaacagcgcgccaacaatcgggatattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAAc                                                                                                                                    <  2:573430‑M2/17‑1 (MQ=255)
                aataatcatgatggcgaggatcacgcctgccgcgaggataccgataccaaatgcggggccagagaacagcgcgccaacaatcgggatattcgacatgatattgccgaccggctcctgaaagtcaacggcgaTCAGCAGCGCGATAAaca                                                                                                                                   >  1:210690‑M2/132‑148 (MQ=255)
                 ataatcatgatggcgaggatcacgcctgccgcgaggataccgataccaaatgcggggccagagaacagcgcgccaacaatcgggatattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGa                                                                                                                                  <  1:831164‑M2/19‑1 (MQ=255)
                    atcatgatggcgaggatcacgcctgccgcgaggataccgataccaaatgcggggccagagaacagcgcgccaacaatcgggatattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGt                                                                                                                               >  2:723467‑M2/128‑149 (MQ=255)
                     tcatgatggcgaggatcacgcctgccgcgaggataccgataccaaatgcggggccagagaacagcgcgccaacaatcgggatattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTc                                                                                                                              <  2:687704‑M2/23‑1 (MQ=255)
                          acggcgaggatcacgcctaccgcgagtgtaccgataccaaatgcggggccagagaacagcgcgccaacaatcgggatattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCaa                                                                                                                         <  1:624215‑M2/28‑1 (MQ=255)
                                  gatcacgcctgccgcgaggataccgataccaaatgcggggccagagaacagcgcgccaacaatcgggatattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGt                                                                                                                 >  1:288876‑M2/114‑149 (MQ=255)
                                   atcgcgcctggcggggggataccggtgccaaatgcggggccagagaacagcgcgccaacaatcgggatattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTa                                                                                                                <  2:523610‑M2/37‑1 (MQ=255)
                                       cgcctgccgcgaggataccgataccaaatgcggggccagagaacagcgcgccaacaatcgggatattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTCCCGTAGATc                                                                                                            >  1:1115881‑M2/109‑149 (MQ=255)
                                        gcctgccgcgaggataccgataccaaatgcggggccagagaacagcgcgccaacaatcgggatattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCg                                                                                                           >  1:1266510‑M2/108‑149 (MQ=255)
                                          atgcggagaggataccgataccagatgcgggggcagagtatagggcgttaagaatcgggatattcggcatgatattgcggaccggttcctgaaagtaaacggcgaTCAGCAGCGCGATCAACGAAGTCACCAACGTACCGTAGATCGGc                                                                                                         <  2:1046041‑M2/44‑1 (MQ=255)
                                              cgggaggataccgaaaccaaaggcggggccagagaacagcgcgccaacaatcgggatattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCa                                                                                                     <  1:163882‑M2/48‑1 (MQ=255)
                                              cgcgaggataccgataccaaatgcggggccagagaacagcgcgccaacaatcgggatattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCa                                                                                                     >  1:744516‑M2/102‑149 (MQ=255)
                                                 gaggataccgataccaaatgcggggccagagaacagcgcgacaacaatcggggtattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCGgcg                                                                                                  >  2:326320‑M2/99‑149 (MQ=255)
                                                    gataccgataccataggcggggccagagaaccgcgcgccaacaatcgggccattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGccc                                                                                               <  1:380222‑M2/54‑1 (MQ=255)
                                                    gataccgataccaaatgcggggccagagaacagcgcgccaacaatcgggatattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGccc                                                                                               >  2:896996‑M2/96‑149 (MQ=255)
                                                       accgataccaaatgcggggccagagaacagcgcgccaacaatcgggatattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGt                                                                                            <  1:720053‑M2/57‑1 (MQ=255)
                                                       accgataccaaatgcggggccagagaacagcgcgccaacaatcgggatattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGACCGGCACCAGCGCCCCGt                                                                                            >  1:130369‑M2/93‑149 (MQ=255)
                                                        ccgataccaaatgcggggccagagaacagcgcgccaacaatcgggatattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTa                                                                                           <  1:1280243‑M2/58‑1 (MQ=255)
                                                          gataccaaatgcggggccagagaacagcgcgccaacaatcgggatattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGa                                                                                                                                         >  1:1222742‑M2/90‑101 (MQ=255)
                                                          gataccaaatgcggggccagagaacagcgcgccaacaatcgggatattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGa                                                                                                                                         <  2:1222742‑M2/12‑1 (MQ=255)
                                                           ataccaaaggcggggccagagaacagcgcgccaacaaccgggatattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGat                                                                                        <  1:1157419‑M2/61‑1 (MQ=255)
                                                               caaatgcggggccagagaacagcgcgccaacaatcgggatattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCg                                                                                    >  1:441726‑M2/85‑149 (MQ=255)
                                                                aaatgcggggccagagaacagcgcgccaacaatcgggatattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGGTAAACGAAGTCACCAACGTCCCGTAGATCGGCACCAGCGCCCCGTAGATATCGt                                                                                   >  1:1275699‑M2/84‑149 (MQ=255)
                                                                aaatgcggggccagagaacagcgcgccaacaatcgggatattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGt                                                                                   <  2:826491‑M2/66‑1 (MQ=255)
                                                                     cggggccagagaacggcgcgccaacaatcgggatattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGt                                                                              <  1:1026588‑M2/71‑1 (MQ=255)
                                                                      ggggccagagaacagcgcgcaaacaatcgggatattcgacatgatattgccgaccggctcctgaaagtaaacgacgaTCAGCAGCGCGATAAACAGAGTCACCAACGTACCGTACATCGGCGCACGCACGCCGTAGATAGCTTTCGGTg                                                                             >  2:433677‑M2/78‑149 (MQ=255)
                                                                          ccagagaacagcgcgccaacaatcgggatattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTc                                                                                                                              >  2:752136‑M2/74‑96 (MQ=255)
                                                                          ccagagaacagcgcgccaacaatcgggatattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTc                                                                                                                              <  1:752136‑M2/23‑1 (MQ=255)
                                                                           cagagaacagcgcgccaacaatcgggatattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCa                                                                                                                             <  2:112047‑M2/24‑1 (MQ=255)
                                                                           cagagaacagcgcgccaacaatcgggatattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCa                                                                                                                             >  1:112047‑M2/73‑96 (MQ=255)
                                                                           cagagaacagcgcgccaacaatcgggatattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATcc                                                                        >  1:748314‑M2/73‑149 (MQ=255)
                                                                                  tttCAGCCAGCCAGGCGCAAGCTCAGTCAGGAACAGTGCAATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCtt                                                                 <  1:265887/149‑1 (MQ=255)
                                                                                  cagcgcgccaacaatcgggatattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCtt                                                                 <  1:68357‑M2/84‑1 (MQ=255)
                                                                                   agcgcgacaacaatcggtatgttcgacatgatattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCttt                                                                >  2:1073542‑M2/65‑149 (MQ=255)
                                                                                    gcgcgccaacaatcgggatattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTg                                                               <  1:1150372‑M2/86‑1 (MQ=255)
                                                                                        gccaacaatcgggatattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTca                                                                                                                                                  >  1:918161‑M2/60‑62 (MQ=255)
                                                                                        gccaacaatcgggatattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTca                                                                                                                                                  <  2:918161‑M2/3‑1 (MQ=255)
                                                                                         ccaacaatcgggatattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCg                                                                                <  2:584251‑M2/69‑1 (MQ=255)
                                                                                           aacaatcgggatattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATa                                                        >  1:434883‑M2/57‑149 (MQ=255)
                                                                                            acaatcgggatattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAg                                                       <  1:723467‑M2/94‑1 (MQ=255)
                                                                                               atcgggatattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCCACAGCGCCCCGTAGGTATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGaa                                                    >  1:475063‑M2/53‑149 (MQ=255)
                                                                                               atcgggatattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGaa                                                    >  2:447719‑M2/53‑149 (MQ=255)
                                                                                               atcgggatattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGaa                                                    >  1:475073‑M2/53‑149 (MQ=255)
                                                                                                  gggatattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGc                                                 <  1:960879‑M2/100‑1 (MQ=255)
                                                                                                   ggatattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGt                                                                              <  2:381307‑M2/71‑1 (MQ=255)
                                                                                                   ggatattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGt                                                                              >  1:381307‑M2/49‑119 (MQ=255)
                                                                                                    gatatgcgacatgatattgactaccggcttctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTGCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCa                                               <  1:565059‑M2/102‑1 (MQ=255)
                                                                                                     atattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAg                                              <  1:1016438‑M2/103‑1 (MQ=255)
                                                                                                      tattcgacatgatattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGa                                             <  2:744516‑M2/104‑1 (MQ=255)
                                                                                                             catgatattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCCTCCCACTCTTTGGTCCATAGGAAACCCAGACCAAAtt                                      >  2:1280601‑M2/39‑149 (MQ=255)
                                                                                                                gatattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCt                                   <  1:896996‑M2/114‑1 (MQ=255)
                                                                                                                gatattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCt                                   <  1:379463‑M2/114‑1 (MQ=255)
                                                                                                                gatattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACACTTTGGTCCATAGGAAAGCCCGACCAACTTTCt                                   >  2:343369‑M2/36‑149 (MQ=255)
                                                                                                                 atattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGt                                                                              <  1:1042694‑M2/71‑1 (MQ=255)
                                                                                                                 atattgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGt                                                                              >  2:1042694‑M2/35‑105 (MQ=255)
                                                                                                                   attgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGaa                                >  2:1396163‑M2/33‑149 (MQ=255)
                                                                                                                   attgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGa                                 <  2:782840‑M2/116‑1 (MQ=255)
                                                                                                                   attgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGa                                 >  1:782840‑M2/33‑148 (MQ=255)
                                                                                                                   attgccgaccggctcctgaaagtaaacggcgaTCAGCAGCACGATAAACGAAGTCACCCCAGACCTGGAGTTCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTCTGGTCCATAGGAAAGCCAGACCAAATTTCTGaa                                <  1:1061728‑M2/117‑1 (MQ=255)
                                                                                                                    ttgccgaccggctcctgaaagtaaacggcgaTCGGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGAACGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGAACAAATTTCTGAAt                               >  2:913031‑M2/32‑149 (MQ=255)
                                                                                                                    ttgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGAAt                               <  2:405653‑M2/118‑1 (MQ=255)
                                                                                                                    ttgccgaccggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGAAt                               >  2:1139297‑M2/32‑149 (MQ=255)
                                                                                                                         gaccggctcctgaaagtaaacggcgaTAGACAGTACAATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGAATGCTCg                          >  1:348724‑M2/27‑149 (MQ=255)
                                                                                                                          accggctcctgaaagtaaacggcgaTCAGCAGCGCGCTAAACGCAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCGTCCCACTCTTTGGCCCATAGGAAAGCCCGACCCAATTTCTGAATGCTCgg                         >  1:85786‑M2/26‑149 (MQ=255)
                                                                                                                          accggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGAATGCTCgg                         >  1:85916‑M2/26‑149 (MQ=255)
                                                                                                                            cggctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGAATGCTCGGcc                       >  1:843236‑M2/24‑149 (MQ=255)
                                                                                                                              gctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGtt                                                                                  >  1:435255‑M2/22‑88 (MQ=255)
                                                                                                                              gctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGtt                                                                                  <  2:435255‑M2/67‑1 (MQ=255)
                                                                                                                              gctcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCTATAGGAAAGCCAGACCAAATTTCTGAATGCTCGGCCag                     <  2:1266510‑M2/128‑1 (MQ=255)
                                                                                                                              gccccgaaaagtcaacggcaaTCACCAGCCCCATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTGCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGAATGCTCGGCCag                     <  1:326320‑M2/128‑1 (MQ=255)
                                                                                                                                tcctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCCCCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGAATGCTCGGCCagga                   <  1:918310‑M2/130‑1 (MQ=255)
                                                                                                                                tcatgaaagtaaacggcgaTCGGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGGCCATAGGAAAGCCAGACCAAATTTCTGAATGCTCGGCCagga                   <  1:582569‑M2/130‑1 (MQ=255)
                                                                                                                                  ctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGt                                                             >  2:882919‑M2/18‑105 (MQ=255)
                                                                                                                                  ctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGt                                                             <  1:882919‑M2/88‑1 (MQ=255)
                                                                                                                                  ctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGAATGCTCGGCCaggggg                 >  1:792948‑M2/18‑149 (MQ=255)
                                                                                                                                  ctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGAATGCTCGGCCaggagg                 <  1:1396163‑M2/132‑1 (MQ=255)
                                                                                                                                  ctgaaagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGAATGCTCGGCCaggagg                 >  1:1392427‑M2/18‑149 (MQ=255)
                                                                                                                                      aagtaaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGAATGCTCGGCCAGGAGGAgat             >  1:1404164‑M2/14‑149 (MQ=255)
                                                                                                                                         taaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGAATGCTCGGCCAGGAGGAgatgat          >  2:1296383‑M2/11‑149 (MQ=255)
                                                                                                                                          caacgccgaGCAGCAGCGCGATAAACGAAGTCACCAACGTCCCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGAATGCTCGGCCAGGAGGAGATGATc         <  2:60062‑M2/140‑1 (MQ=255)
                                                                                                                                          aaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGAATGCTCGGCCAGGAGGAGATGATc         <  2:1392427‑M2/140‑1 (MQ=255)
                                                                                                                                          aaacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGACCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGAGTGCTCGGCCAGGAGGAGATGATc         >  2:745213‑M2/10‑149 (MQ=255)
                                                                                                                                           aacggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGAATGCTCGGCCAGGAGGAGATGATCa        <  1:889488‑M2/141‑1 (MQ=255)
                                                                                                                                             cggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGAATGCTCGGCCAGGAGGAGATGATCaga      <  1:573125‑M2/143‑1 (MQ=255)
                                                                                                                                              ggcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAACTTCTGGTTGACCGGCCAGGAAGCGAACATcagat     >  2:424424‑M2/6‑148 (MQ=255)
                                                                                                                                               gcgaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGAGCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCt                                   >  1:930854‑M2/5‑118 (MQ=255)
                                                                                                                                               gcgaTCAGCAGAGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGAATGCTCGGCCAGGAGGAGATGATCagaga    <  1:213319‑M2/145‑1 (MQ=255)
                                                                                                                                                 gaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGAATGGTCGGCCAGGAGGAGATGATCAgagaga  >  2:1436381‑M2/3‑149 (MQ=255)
                                                                                                                                                 gaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGAATGCTCGGCCAGGAGGAGATGATCAgagaga  <  2:288876‑M2/147‑1 (MQ=255)
                                                                                                                                                 gaTCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGAATGCTCGGCCAGGAGGAGATGATCAgagaga  <  2:1404164‑M2/147‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
GCGCAAAGATAAACAGGCCCCACATGCCGTAAACGATACTTGGAATGGCTGCCAGCAGCTCAATGGCGATACCCAGCGGGCGTTTCAGCCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTCCATAGGAAAGCCAGACCAAATTTCTGAATGCTCGGCCAGGAGGAGATGATCAGAGAGA  >  NC_000913_3_pae_tpiA/3909990‑3910283

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.