| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913_3_pae_tpiA | 1,756,121 | Δ557 bp | coding (424‑980/1413 nt) | pykF → | pyruvate kinase I |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913_3_pae_tpiA | 1756121 | 1756677 | 557 | 60 [0] | [0] 60 | pykF | pyruvate kinase I |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_pae_tpiA | = 1756120 | 0 (0.000) | 60 (0.730) | 46/284 | 0.8 | 100% | coding (423/1413 nt) | pykF | pyruvate kinase I |
| ? | NC_000913_3_pae_tpiA | 1756678 = | 0 (0.000) | coding (981/1413 nt) | pykF | pyruvate kinase I | |||||
TTTCACCACTGATAAATCTGTTATCGGCAACAGCGAAATGGTTGCGGTAACGTATGAAGGTTTCACTACTGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAGTTATCTGTAAAGTGCTGAACAACGGTGACCTGGGCGAAAACAAAGGTGTGAACCTGCCTGGCGTTTCCATTGCTCTGCCAGCACTGGCTGAAAAAGACAAACAGGACCTGATCTTTGGTTGCGAACAAGGCGTAGACTTTGTTGCT > NC_000913_3_pae_tpiA/1755973‑1756267 | tttCACCACTGATAAATCTGTTATCGGCAACAGCGAAATGGTTGCGGTAACGTATGAAGGTTTCACTACTGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAc > 1:1011203‑M1/1‑148 (MQ=255)tttCACCACTGATAAATCTGTTATCGGCAACAGCGAAATGGTTGCGGTAACGTATGAAGGTTTCACTACTGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAc > 1:146703‑M1/1‑148 (MQ=255) ttCACCACTGATAAATCTGTTATCGGCAACAGCGAAATGGTTGCGGTAACGTATGAAGGTTTCACTACTGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAca < 2:1169742‑M1/149‑3 (MQ=255) tCACCACTGATAAATCTGTTATCGGCAACAGCGAAATGGTTGCGGTAACGTATGAAGGTTTCACTACTGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcat > 1:155585‑M1/1‑146 (MQ=255) ccacTGATAAATCTGTTATCGGCAACAGCGAAATGGTTGCGGTAACGTATGAAGGTTTCACTACTGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggc < 2:262568‑M1/149‑7 (MQ=255) ccacTGATAAATCTGTTATCGGCAACAGCGAAATGGTTGCGGTAACGTATGAAGGTTTCACTACTGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggc < 2:629360‑M1/149‑7 (MQ=255) cacTGATAAATCTGTTATCGGCAACAGCGAAATGGTTGCGGTAACGTATGAAGGTTTCACTACTGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTTTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACACAcatggcg > 2:418915‑M1/1‑142 (MQ=255) acTGATAAATCTGTTATCGGCAACAGCGAAATGGTTGCGGTCACGTATGAAGGTTTCACTACTGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcga < 2:908423‑M1/149‑9 (MQ=255) acTGATAAATCTGTTATCGGCAACAGCGAAATGGTTGCGGTAACGTATGAAGGTTTCACTACTGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcga < 2:155585‑M1/149‑9 (MQ=255) aTAAACCTGTTATCGGCAACAGCGAAATGGTTGCGGTAACGTATGAAGGTTTCACTACTGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccat < 2:1425313‑M1/149‑13 (MQ=255) tAAATCTGTTATCGGCAACAGCGAAATGGTTGCGGTAACGTATGAAGGTTTCACTACTGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatc < 1:1150319‑M1/149‑14 (MQ=255) aaaTCTGTTATCGGCAACAGCGAAATGGTTGCGGTAACGTATGAAGGTTTCACTACTGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatct > 1:619824‑M1/1‑135 (MQ=255) aTCTGTTATCGGCAACAGCGAAATGGTTGCGGTAACGTATGAAGGTTTCACTACTGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgc < 1:68485‑M1/149‑17 (MQ=255) tCTGTTATCGGGAACAGTTGAATGGTTGTGGTATCGTATGAAGGTTTCACTGCTGACCTGTGTGTTGGCAACACCGTACGGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcg < 2:553189‑M1/149‑18 (MQ=255) ggtaacggaaaCAGCGAAATGGTTACGGTAACGTATGAAGGTTTCACTACTGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaac < 1:362335‑M1/144‑21 (MQ=255) tCGGCAACAGCGAAATGGTTGCGGTAACGTATGAAGGTTTCACTACTGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTACCAAAcatggcgaccatctgcgaacgtac > 1:88981‑M1/1‑125 (MQ=255) aGCGAAATGGTTGCGGTAACGTATGAAGGTTTCACTACTGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcg > 2:46898‑M1/1‑117 (MQ=255) aaaTGGTTGCGGTAACGTATGAAGGTTTCACTACTGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGTAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgat < 1:680788‑M1/149‑37 (MQ=255) aaaTGGGTGCGGTAACGTATGAAGGCTTCACTACTGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgat < 1:243779‑M1/149‑37 (MQ=255) gggaacttATGAAGGTTTCACTACTGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgt < 1:408054‑M1/146‑47 (MQ=255) aaCGTATGAAGGTTTCACTACTGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctc < 2:1033479‑M1/149‑50 (MQ=255) aaCGGATGAGGGTTTCACTACTGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctc < 1:805543‑M1/149‑50 (MQ=255) tttCACTACTGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaacaat < 1:244380‑M1/149‑62 (MQ=255) tttCACGACTGACCTCGCTGTTGGCAACACCGTACGGGTTGAGGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaacaat < 2:914573‑M1/149‑62 (MQ=255) ttCACTACTGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaacaatg < 2:226178‑M1/149‑63 (MQ=255) cACTACTGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAtatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaacaatgac > 1:1285740‑M1/1‑85 (MQ=255) ctactGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTCCCGCCATTGAAGGTAACAAAcatggcgaccatctacgaccgtaacgaccgcgtgatgaacagccggctcgagttcaacaatgacaa > 2:184811‑M1/1‑83 (MQ=255) ctgtctgtTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaacaatgacaaccgtaaac > 2:212105‑M1/1‑75 (MQ=255) ctgtctgtTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaacaatgacaaccgtaaac > 2:336219‑M1/1‑75 (MQ=255) ctgtctgtTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaacaatgacaaccgtaaac > 1:1369268‑M1/1‑75 (MQ=255) gtctgtTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaacaatgacaaccgtaaacta > 2:187175‑M1/1‑73 (MQ=255) tctttTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaacaatgacaaccgtaaactgc < 2:92988‑M1/149‑78 (MQ=255) tGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgaggtcaacaatgacaaccgtaaactgcgcattaccgaagcggtatg > 1:254801‑M1/1‑53 (MQ=255) gTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaacaatgacaaccgtaaactgcgcattaccgaagcggtatgcc > 1:938721‑M1/1‑51 (MQ=255) tGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgagaacgtaccgaccgcgtgatgaacagccgtctcgagttaaacaataacaacagtaaactgagcattaacgaaccagtatgccgt > 2:565390‑M1/1‑49 (MQ=255) gACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaacaatgacaaccgtaaactgcgcattaccgaagcggtatgccgtg < 2:223077‑M1/149‑102 (MQ=255) gTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaacaatgacaaccgtaaactgcgcattaccgaagcggtatgccgtggtgccgt > 1:53277‑M1/1‑41 (MQ=255) tCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaacaatgacaaccgtaaactgcgcattaccgaagcggtttgccgtggtgccgtt > 1:1162015‑M1/1‑40 (MQ=255) cTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaacaatgacaaccgtaaactgcgcattaccgaagcggtaagccgtagtgccggtg > 2:1154447‑M1/1‑39 (MQ=255) aTCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaacaatgacaaccgtaaactgcgcattaccgaagcggtatgccgtggtgccgttgaaa > 1:275823‑M1/1‑36 (MQ=255) aTCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaacaatgacaaccgtaaactgcgcattaccgaagcgggatgccgtggtgccgcttcca > 2:1375833‑M1/1‑36 (MQ=255) gcgGTATGGAAGTTAACGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaacaatgacaaccgtaaactgcccattaccgaagcggtaggccggggtgccgttgaaac > 2:896134‑M1/2‑35 (MQ=255) ggTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaacaatgacaaccgtaaactgcgcattaccgaagcggtatgccgtggtgccgttgaaact > 1:562268‑M1/1‑33 (MQ=255) ggTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaacaatgacaaccgtaaactgcgcattaccgaagcggtatgccgtggtgccgttgaaact < 2:562268‑M1/148‑116 (MQ=255) gTATGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaacaatgacaaccgtaaactgcgcattaccgaagcggtatgccgtggtgccgttgaaactgc < 1:46898‑M1/149‑118 (MQ=255) gTAGGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaacaatgccaaccgtaaactgcgcattaccgaagcggtatgccgtggtgccgttgaaactgc < 2:1011203‑M1/149‑118 (MQ=255) tGGAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaacaatgacaaccgtaaactgcgcattaccgaagcggtatgccgtggtgccgttgaaactgctga > 1:1223864‑M1/1‑29 (MQ=255) gAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaacaatgacaaccgtaaactgcgcattaccgaagcggtatgccgtggtgccgttgaaactgctgaaa > 2:103238‑M1/1‑27 (MQ=255) gAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaacaatgacaaccgtaaactgcgcattaccgaagcggtatgccgtggtgccgttgaaactgctgaaa > 2:651647‑M1/1‑27 (MQ=255) gAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaa < 1:549273‑M1/84‑58 (MQ=255) gAAGTTACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaa > 2:549273‑M1/1‑27 (MQ=255) ttACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaacaatgacaaccgtaaactgcgcattaccgaagcggtatgccgtggtgccgttgaaactgctgaaaaact < 1:892408‑M1/149‑127 (MQ=255) tACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaacaatgacaaccgtaaactgcgcattaccgaagcggtatgccgtggtgccgttgaaactgctgaaaaactg < 2:1425960‑M1/149‑128 (MQ=255) tACCGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaacaatgacaaccgtaaactgcgcattaccgaagcggtatgccgtggtgccgttgaaactgctgaaaaactg < 2:1369268‑M1/149‑128 (MQ=255) cGCCATTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaacaatgacaaccgtaaactgcgcattaccgaagcggtatgccgtggtgccgttgaaactgctgaaaaactggat < 2:1159741‑M1/149‑131 (MQ=255) gtcatTGAAGTTAACAAAcatagcgaccatctgcgaacgtgccgtccgcgtgatgaacagccgtctcgagttcaacaatgacaaccgtaaactgcgcattaccgaagcggtatgccgtggtgccgttgaaactgctgaaaaactggatg < 1:184811‑M1/147‑132 (MQ=255) aTTGAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaacaatgacaaccgtaaactgcgcattaccgaagcggtatgccgtggtgccgttgaaactgctaaagaaatgaccgacg > 2:129312‑M1/1‑15 (MQ=255) gAAGGTAACAAAcatggcgaccatctgcgaacgtaccgaccgcgtgatgaacagccgtctcgagttcaacaatgacaaccgtaaactgcgcattaccgaagcggcatgccgtggtgccgttgaaactgctgaacaactggatcctccgc > 2:198822‑M1/1‑12 (MQ=255) acaaacatggcgaccatctgcgcacgtaccgaccgcatgatgaacagccgtctcgagttcaactatgacaaccgtaaactgcgcattaccgaagcggtatgccgtggtgccgttgaaattactaaaaaactggatgctccgctgatcgt > 2:1382022‑M1/1‑5 (MQ=255) aacatggcgaccatctgcgaacgtcccgaccgcgcgattagcagccgtctcgagttcaacaatgacaaccgtaaactgcgcattaccgaagcggtatgccgtggtgccgttgaaactgctgaaaaactggatgctccgctgatcgtggt < 1:758703‑M1/149‑148 (MQ=255) | TTTCACCACTGATAAATCTGTTATCGGCAACAGCGAAATGGTTGCGGTAACGTATGAAGGTTTCACTACTGACCTGTCTGTTGGCAACACCGTACTGGTTGACGATGGTCTGATCGGTATGGAAGTTACCGCCATTGAAGGTAACAAAGTTATCTGTAAAGTGCTGAACAACGGTGACCTGGGCGAAAACAAAGGTGTGAACCTGCCTGGCGTTTCCATTGCTCTGCCAGCACTGGCTGAAAAAGACAAACAGGACCTGATCTTTGGTTGCGAACAAGGCGTAGACTTTGTTGCT > NC_000913_3_pae_tpiA/1755973‑1756267 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |