New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_pae_tpiA 292971 =108 (0.920)9 (0.080) 9/264 13.7 8.2% intergenic (‑23/+249) yagK/yagL CP4‑6 prophage; conserved protein/CP4‑6 prophage; DNA‑binding protein
?NC_000913_3_pae_tpiA 292992 = 101 (0.910)intergenic (‑44/+228) yagK/yagL CP4‑6 prophage; conserved protein/CP4‑6 prophage; DNA‑binding protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 109 total aligned reads displayed.

ATAGTGGAGATCGACACGTACAGCAATTAACCTAGGATACCGGTTAGTCAAATAACATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACA  >  NC_000913_3_pae_tpiA/292823‑293119
                                                                                                                                                    |                                                                                                                                                    
aTAGTGGAGATCGACACGTACAGCAATTAACCTAGGATACCGGTTAGTCAAATAACATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCt                                                                                                                                                      >  1:1207208/1‑149 (MQ=255)
 tAGTGGAGATCGACACGTACAGCAATTAACCTAGGATACCGGTTAGTCAAATAACATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTa                                                                                                                                                     >  2:268775/1‑149 (MQ=255)
   gttgataTCGACCCGTACAGCAATTAACCTAGGATACCGGTTAGTCCAATAACATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACg                                                                                                                                                   <  1:98925/143‑1 (MQ=255)
   gTGGAGATCGACACGTACAGCAATTAACCTAGGATACCGGTTAGTCAAATAACATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACg                                                                                                                                                   <  2:1860082/149‑1 (MQ=255)
    tGGAGATCGACACGTACAGCAATTAACCTAGGATACCGGTTAGTCAAATAACATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACgg                                                                                                                                                  >  1:721087/1‑149 (MQ=255)
     ggAGATCGACACGTACAGCAATTAACCTAGGATACCGGTTAGTCAAATAACATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGt                                                                                                                                                 >  1:1442765/1‑149 (MQ=255)
     ggAGATCGACACGTACAGCAATTAACCTAGGATACCGGTTAGTCAAATAACATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGt                                                                                                                                                 >  1:887699/1‑149 (MQ=255)
         aTCGAAACGTACAGCAATTAACCTAGGATACCGGTTAGTCAAATAACATAATAAGTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCtat                                                                                                                                             <  2:1583359/149‑1 (MQ=255)
           cGACACGTACAGCAATTAACCTAGGATACCGGTTAGTCAAATAACATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAg                                                                                                                                           <  1:880687/149‑1 (MQ=255)
            gACACGTACAGCAATTAACCTAGGATACCGGTTAGTCAAATAACATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGc                                                                                                                                          <  2:1967963/149‑1 (MQ=255)
            gACACGTACAGCAATTAACCTAGGATACCGGTTAGTCAAATAACATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGc                                                                                                                                          <  2:670858/149‑1 (MQ=255)
             acacGTACAGCAATTAACCTAGGATACCGGTTAGTCAAATAACATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTTTATTTGGTCCTACGGTTtagggcc                                                                                                                                         >  2:430153/1‑144 (MQ=255)
             acacGTACAGCAATTAACCTAGGATACCGGTTAGTCAAATAACATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCa                                                                                                                                         >  2:291084/1‑149 (MQ=255)
              cacGTACAGCAATTAACCTAGGATACCGGTTAGTCAAATAACATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAg                                                                                                                                        <  2:1442765/149‑1 (MQ=255)
               acGTACAGCAATTAACCTAGGATACCGGTTAGTCAAATAACATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGa                                                                                                                                       <  1:847110/149‑1 (MQ=255)
                 ggaCAGCAATGAACCGAGGAAACCGGTGAGCGAAATAACATAAGAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGAcc                                                                                                                                     <  1:199245/147‑1 (MQ=255)
                    cAGCAATTAACCTAGTGTACCTGTTAGTCAAATAACATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTa                                                                                                                                  <  1:1279705/149‑1 (MQ=255)
                    cAGCAATTAACCTAGGATACCGGTTAGTCAAATAACATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGATTACCTTGATATGTTTTCATAATATATACCCGTATTTGGTCCTACGGTCTATATCAGACCGTa                                                                                                                                  >  2:216283/1‑149 (MQ=255)
                    cAGCAATTAACCTAGGATACCGGTTAGTCAAATAACATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTa                                                                                                                                  <  1:1735224/149‑1 (MQ=255)
                       cAATTAACCTAGGATACCGGTTAGTCAAATAACATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAg                                                                                                                               <  1:1237831/149‑1 (MQ=255)
                         aTTAACCTAGGATACCGGTTAGTCAAATAACATAATAATTTATTAATCTTACTCTGATCTTCGAGGATATGTACTCCATGAGTACCTTGATATGTGTTCATAATATATACATGTATTTGGTCCTACGGTCTATAGCAGACCGTAAAggc                                                                                                                             >  2:1874022/1‑148 (MQ=255)
                         aTTAACCTAGGATACCGGTTAGTCAAATAACATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAggg                                                                                                                             <  1:1910860/149‑1 (MQ=255)
                              ccTAGGATACCGGTTAGTCATATAACATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAg                                                                                                                               <  2:1986116/142‑1 (MQ=255)
                              ccTAGGATACCGGTTAGTCATATAACATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAg                                                                                                                               >  1:1986116/1‑142 (MQ=255)
                              ccTAGGATACCGGTTAGTCAAATAACATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATTGCAGACCGTACCGGGATGcc                                                                                                                        >  1:21847/1‑149 (MQ=255)
                              ccTAGGATACCGGTTAGTCAAATAACATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGcc                                                                                                                        >  2:44559/1‑149 (MQ=255)
                                   gATACCGGTTAGTCAAATAACATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATAca                                                                                                                   >  2:570418/1‑149 (MQ=255)
                                   gATACCGGTTAGTCAAATAACATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATAAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATAca                                                                                                                   >  1:820948/1‑149 (MQ=255)
                                    aTACCGGTTAGTCAAATAACATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATAcag                                                                                                                  <  2:1950607/149‑1 (MQ=255)
                                      aCCGGTTAGTCAAATAACATAATAATTTATTAATCTTATTCTGATATTCGCGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGACTATAGCAGACCGTACAGGGGTGCCaataaggc                                                                                                                >  1:154583/1‑142 (MQ=255)
                                      aCCGGTTAGTCAAACAACATAATAAGTTATTAATCTTACTCTGATATTCGAGGAAATGTACTCCATGAGTACCTTGATATGTTTTCATAATATAAACCTGTATGTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATAcaggg                                                                                                                <  2:1584693/149‑2 (MQ=255)
                                        cGGTTAGTCAAATAACATAATAATTTATTAATCTTACTCTGATATTCGATGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATAcaggcag                                                                                                              >  1:1218159/1‑149 (MQ=255)
                                        cGGTTAGTCAAATAACATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTCCAGGGATGCCATAaaggcag                                                                                                              >  2:49880/1‑149 (MQ=255)
                                         ggTTAGTCAAATAACATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATAcaggcagg                                                                                                             <  1:291084/149‑1 (MQ=255)
                                             aGTCAAATAACATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTa                                                                                                         >  2:1922773/1‑149 (MQ=255)
                                               tCAAATAACATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTCCGGTATATTGCTGACCGTACAGGGATGCCATACAGGCAGGGCTAtt                                                                                                       >  1:389505/1‑149 (MQ=255)
                                               tCAAATAACATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTAtt                                                                                                       >  2:1624005/1‑149 (MQ=255)
                                                 aaaTAACATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAAGATATACCTGTATTTGGTCCTACGGTCTATATCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTcc                                                                                                     <  2:1403708/149‑1 (MQ=255)
                                                  aaTAACATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCt                                                                                                    <  1:1272950/149‑1 (MQ=255)
                                                   aTACCATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTTCTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCTg                                                                                                   <  1:326660/149‑1 (MQ=255)
                                                   aTAACATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCTg                                                                                                   <  1:1094152/149‑1 (MQ=255)
                                                     aaCATAATAATTTATTAATCTTACTCTGATATTCGAGGATATTTACGCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGATCGTACAGGGCTGCCATACAGGCGGGACTATTCCTggg                                                                                                 >  1:800988/1‑148 (MQ=255)
                                                     aaCATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCTGGt                                                                                                 <  2:1687518/149‑1 (MQ=255)
                                                        ataataAATTATTAATCTTACTATGATATTCGAGGCTATGGACTCCATGAGTTCCTTGATGTGTGTTGATAATATATACCTGTATTGGGTCTTACGGTGTGTAGCAGACCGTACAGTGATGCCATACAGGCAGGGCTATTCCCGTTCAc                                                                                              <  2:756525/149‑1 (MQ=255)
                                                         taataaTTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACt                                                                                             >  2:393319/1‑149 (MQ=255)
                                                            taatTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACg                                                                                                                                                   >  1:821853/1‑92 (MQ=255)
                                                            taatTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACg                                                                                                                                                   <  2:821853/92‑1 (MQ=255)
                                                            taatTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTc                                                                                                      >  2:777387/1‑137 (MQ=255)
                                                            taatTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTc                                                                                                      <  1:777387/137‑1 (MQ=255)
                                                                ttattaATCTTATTCTGATATTCGATGATATTTACTCCATGATTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCg                                                                                      <  2:800988/149‑1 (MQ=255)
                                                                 tattaATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCgg                                                                                     <  2:1062371/149‑1 (MQ=255)
                                                                   ttaATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGta                                                                                   >  2:1721292/1‑149 (MQ=255)
                                                                    taATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGACAGGGCTATTCCTGGTCACTGTTGTCGGtat                                                                                  <  1:1594701/149‑1 (MQ=255)
                                                                       tCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGtatata                                                                               >  1:688404/1‑149 (MQ=255)
                                                                       acTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGtatata                                                                               <  1:325519/148‑1 (MQ=255)
                                                                            aggatatatGCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGt                                                                          <  2:2065781/144‑1 (MQ=255)
                                                                             tctGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGGTTTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACATGCCTGGCTATTCCTGGTCACTGTTGTCGCTATATACTGCTa                                                                         >  2:385141/1‑149 (MQ=255)
                                                                              ctGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTAt                                                                        <  2:1207208/149‑1 (MQ=255)
                                                                               tGATACTCGCGGATATGTACTCCATGAGTACCTTGATATGTTTACACAATATCTCCCTGTATTTGCTCCTACGGTCTCTAGCAACCCGTTCACCAATGCCATCCAGGCGGGGGTAAACATGCACACCCGTTTGTGTATATACTGGTAtt                                                                       >  2:1385455/1‑148 (MQ=255)
                                                                               tGAAATTGGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATc                                                                       <  2:573560/149‑1 (MQ=255)
                                                                               ggacatTCGAGGACATGTACTACATGGGTACCTTGATATTGTTTCATAAGATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGAGGCCATACAGGCAGGGCTATTCCTGGTCCCTGTGGTCGGTATATACTGGTATc                                                                       <  2:666606/145‑1 (MQ=255)
                                                                                     tCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGAttt                                                                 <  1:570418/149‑1 (MQ=255)
                                                                                       gAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTa                                                               <  2:688404/149‑1 (MQ=255)
                                                                                       gAGGATATGTACTCCATAAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTa                                                               <  1:838179/149‑1 (MQ=255)
                                                                                              tGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACg                                                          >  1:1159152/1‑147 (MQ=255)
                                                                                              tGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACg                                                          <  2:1159152/147‑1 (MQ=255)
                                                                                               gTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCTGCTCAAGGTTGTCGGTATATAGTGCTATAACAGTTTAGTGTGGAc                                                       >  1:440964/1‑149 (MQ=255)
                                                                                                tACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCta                                                                                                                                              >  2:1703205/1‑61 (MQ=255)
                                                                                                tACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCta                                                                                                                                              <  1:1703205/61‑1 (MQ=255)
                                                                                                tACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGc                                                                                                                         >  2:659478/1‑82 (MQ=255)
                                                                                                tACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGc                                                                                                                         <  1:659478/82‑1 (MQ=255)
                                                                                                tACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATCCTGGTGTCAGATTTTAATACGTACa                                                      >  2:220125/1‑149 (MQ=255)
                                                                                                tACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACa                                                      >  1:228093/1‑149 (MQ=255)
                                                                                                 aCTTCATGAGTACCTGGATATGTTTTCATAATAGATACCTGTATTTGGTCCTACGGTCTATAGCAGACTGTACAGGGATGCCATACAGGCATGGCTATTCCTGGTCACTGTTGCCGCACTCTATTGGTATCAGATTTTAGTACGGACAt                                                     <  2:17909/149‑1 (MQ=255)
                                                                                                 aCTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAg                                                                                                                                           <  2:1650301/63‑1 (MQ=255)
                                                                                                 aCTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAg                                                                                                                                           >  1:1650301/1‑63 (MQ=255)
                                                                                                  cTCCATGAGTACCTTGATATGTTTTCATAATAGATACCTGTATGTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATa                                                    <  1:790395/149‑1 (MQ=255)
                                                                                                   tCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATTCTGGTATCAGATTTTAGTACGGACATAc                                                   >  1:211342/1‑149 (MQ=255)
                                                                                                   tCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATAc                                                   <  1:1624005/149‑1 (MQ=255)
                                                                                                    ccATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTTTATCGCAGACCTTACAGGTATGCGGTGCAGGCAGGGCTAGTCGTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATAct                                                  <  2:712857/149‑1 (MQ=255)
                                                                                                      tggAGTACCTTGATATGTTTTCATAATATATACCTGTATGTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATActga                                                >  2:504888/3‑149 (MQ=255)
                                                                                                      aTGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATActga                                                <  1:268775/149‑1 (MQ=255)
                                                                                                              cTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATta                                        >  1:501694/1‑149 (MQ=255)
                                                                                                                 gATATGTTTTCATAATATATAACTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCTGGTAACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATtacta                                     <  2:719546/149‑1 (MQ=255)
                                                                                                                     tGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTActct                                 <  2:501694/149‑1 (MQ=255)
                                                                                                                       ttttCAGAATACATACCTGTATTTGGTCCTCCGGTCTATAGCAGACCGTACAGGGCTGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTAGCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTa                               <  1:385141/149‑1 (MQ=255)
                                                                                                                        tttCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTAc                              <  1:1721292/149‑1 (MQ=255)
                                                                                                                         ttCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACt                             >  2:1660196/1‑149 (MQ=255)
                                                                                                                             taataTATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTg                         >  2:242213/1‑149 (MQ=255)
                                                                                                                                   ataCCTGTAGTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGTACATACTGATCTGATTACTACTCTTACTGGTGAATACa                   <  2:887699/149‑1 (MQ=255)
                                                                                                                                     acttGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTCCGGACATACTGATCTGATTACTACTCTTACTGGTGAATAAAgg                 >  2:1926553/4‑149 (MQ=255)
                                                                                                                                       cTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTg                                                                            >  2:510185/1‑88 (MQ=255)
                                                                                                                                       cTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTg                                                                            <  1:510185/88‑1 (MQ=255)
                                                                                                                                       cTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGgta               >  1:1826581/1‑149 (MQ=255)
                                                                                                                                       cTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGgta               <  1:44559/149‑1 (MQ=255)
                                                                                                                                            tttGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAag          >  1:2019700/1‑149 (MQ=255)
                                                                                                                                                gTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTa      >  1:1538992/1‑149 (MQ=255)
                                                                                                                                                  ccTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAGTACAGGTAGTAAGAGTaca    >  1:1196056/1‑149 (MQ=255)
                                                                                                                                                   cTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGaa                       >  2:461057/1‑129 (MQ=255)
                                                                                                                                                    tACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTaacca  >  1:1202065/1‑145 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
ATAGTGGAGATCGACACGTACAGCAATTAACCTAGGATACCGGTTAGTCAAATAACATAATAATTTATTAATCTTACTCTGATATTCGAGGATATGTACTCCATGAGTACCTTGATATGTTTTCATAATATATACCTGTATTTGGTCCTACGGTCTATAGCAGACCGTACAGGGATGCCATACAGGCAGGGCTATTCCTGGTCACTGTTGTCGGTATATACTGGTATCAGATTTTAGTACGGACATACTGATCTGATTACTACTCTTACTGGTGAATACAGGTAGTAAGAGTACACA  >  NC_000913_3_pae_tpiA/292823‑293119

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.