New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 382385 =2194 (1.210)95 (0.060) 54/226 59.0 4.6% intergenic (‑165/+30) JCVSYN2_01645/JCVSYN2_01650 DNA polymerase III subunit alpha/tyrosine‑‑tRNA ligase
?CP016816 382417 = 1997 (1.230)coding (1243/1245 nt) JCVSYN2_01650 tyrosine‑‑tRNA ligase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 2219 total aligned reads displayed.

TTTTAAAATAATACTAGTTATAAGTTGAGATATAAGTTTAAAAAATATCAAAAAATAAGCTATTAAACAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCTTTTTTAACTAATAGATATTTATTTTGAATTAAATCAAAACTACTTATTAAAGTGTTTTCAT  >  CP016816/382258‑382512
                                                                                                                               |                                                                                                                               
ttttAAAATAATACTAGTTATAAGTTGAGATATAAGTTTAAAAAATATCAAAAAATAAGCTATTAAACAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACaaa                                                                                                                                 <  1:3086664/128‑1 (MQ=255)
ttttAAAATAATACTAGTTATAAGTTGAGATATAAGTTTAAAAAATATCAAAAAATAAGCTATTAAACAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACaaa                                                                                                                                 >  1:624740/1‑128 (MQ=255)
 tttAAAATAATACTAGTTATAAGTTGAGATATAAGTTTAAAAAATATCAAAAAATAAGCTATTAAACAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACaaaa                                                                                                                                <  1:2364523/128‑1 (MQ=255)
  ttAAAATAATACTAGTTATAAGTTGAGATATAAGTTTAAAAAATATCAAAAAATAAGCTATTAAACAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACaaaaa                                                                                                                               >  1:2685175/1‑128 (MQ=255)
  ttAAAATAATACTAGTTATAAGTTGAGATATAAGTTTAAAAAATATCAAAAAATAAGCTATTAAACAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACaaaaa                                                                                                                               >  2:126646/1‑128 (MQ=255)
    aaaaTAATACTAGTTATAAGTTGAGATATAAGTTTAAAAAATATCAAAAAATAAGCTATTAAACAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACaaaaaaa                                                                                                                             >  2:3331847/1‑128 (MQ=255)
         aataCTAGTTATAAGTTGAGATATAAGTTTAAAAAATATCAAAAAATAAGCTATTAAACAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTaa                                                                                                                        >  2:2204729/1‑128 (MQ=255)
          ataCTAGTTATAAGTTGAGATATAAGTTTAAAAAATATCAAAAAATAAGCTATTAAACAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAg                                                                                                                       <  1:1835878/128‑1 (MQ=255)
           taCTAGTTATAAGTTGAGATATAAGTTTAAAAAATATCAAAAAATAAGCTATTAAACAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGt                                                                                                                      <  2:855904/128‑1 (MQ=255)
            aCTAGTTATAAGTTGAGATATAAGTTTAAAAAATATCAAAAAATAAGCTATTAAACAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGtt                                                                                                                     <  1:191091/128‑1 (MQ=255)
                 ttATAAGTTGAGATATAAGTTTAAAAAATATCAAAAAATAAGCTATTAAACAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTaaa                                                                                                                <  1:3199133/128‑1 (MQ=255)
                  tataAGTTGAGATATAAGTTTAAAAAATATCAAAAAATAAGCTATTAAACAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAaac                                                                                                               <  2:255262/128‑1 (MQ=255)
                    taAGTTGAGATATAAGTTTAAAAAATATCAAAAAATAAGCTATTAAACAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCt                                                                                                                          >  1:3261823/1‑115 (MQ=255)
                      aGTTGAGATATAAGTTTAAAAAATATCAAAAAATAAGCTATTAAACAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACt                                                                                                           <  1:714923/128‑1 (MQ=255)
                       gatGAGATATAAGTTTAAAAAATATCAAAAAATAAGCTATTAAACAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCAAAGATTTAaactcctt                                                                                                          >  2:1656057/3‑123 (MQ=255)
                        ttGAGATATAAGTTTAAAATATATCAAAAAATAAGCTATTAAACAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACATa                                                                                                         <  1:2067696/128‑1 (MQ=255)
                        ttGAGATATAAGTTTAAAAAATATCAAAAAATAAGCTATTAAACAAATTATAAAACTACAAAGTAAAGAAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTa                                                                                                         <  2:2895409/128‑1 (MQ=255)
                          gagaTATAAGTTTAAAAAATATCAAAAAATTAGCTATTAAACAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGa                                                                                                       <  2:203829/128‑1 (MQ=255)
                           agaTATAAGTTTAAAAAATATCAAAAAATAAGCTATTAAACAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGATTTAAACAACTTAGAt                                                                                                      >  1:552706/1‑128 (MQ=255)
                            gaTATAAGTTTAAAAAATATCAAAAAATAAGCTATTAAACAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAAAAAAAAAATCTAAGTTTTAAACAACTTAGAta                                                                                                     >  2:3771630/1‑127 (MQ=255)
                              tataAGTTTAAAAAATATCAAAAAATAAGCTATTAAACAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTTAAAATATAAAAAAAAAAATCTAATTATTAAACAACTTAGAtttt                                                                                                   >  2:3558187/1‑128 (MQ=255)
                              tataAGTTTAAAAAATATCAAAAAATAAGCTATTAAACAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGAtttt                                                                                                   >  2:3487820/1‑128 (MQ=255)
                               ataAGTTTAAAAAATATCAAAAAATAAGCTATTAAACAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGAttttt                                                                                                  >  1:2306835/1‑128 (MQ=255)
                                taAGTTTAAAAAATATCAAAAAATAAGCTATTAAACAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATtttta                                                                                                 <  2:936199/128‑1 (MQ=255)
                                 aattttAAAAAATATCAAAAAATAAGCTATTAAACAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATttttat                                                                                                <  2:2841653/125‑1 (MQ=255)
                                  aGTTTAAAAAATATCAAAAAATAAGCTATTAAACAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATttttatt                                                                                               <  2:722641/128‑1 (MQ=255)
                                     ttAAAAAATATCAAAAAATAAGCTATTAAACAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATttttatttta                                                                                            >  1:3782314/1‑128 (MQ=255)
                                       aaaaaaTATCAAAAAATAAGCTATTAAACAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTttattttatt                                                                                          >  1:854984/1‑128 (MQ=255)
                                        aaaaaTATCAAAAAATAAGCTATTAAACAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTttatta                                                                                         >  2:656965/1‑128 (MQ=255)
                                          aaaTATCAAAAAATAAGCTATTAAACAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTaaa                                                                                       >  2:3614090/1‑128 (MQ=255)
                                           aaTATCAAAAAATAAGCTATTAAACAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTaaaa                                                                                      <  1:215546/128‑1 (MQ=255)
                                           aaTATCAAAAAATAAGCTATTAAACAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTaaaa                                                                                      >  1:3546864/1‑128 (MQ=255)
                                            atatCAAAAAATAAGCTATTAAACAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAAt                                                                                     <  2:549027/128‑1 (MQ=255)
                                            atatCAAAAAATAAGCTATTAAACAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAAt                                                                                     <  1:2891340/128‑1 (MQ=255)
                                             tatCAAAAAATAATCTATAAAACAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTTAAAATATAAACAAAAAAATCTAATTATTAAACAACTAAGAATTTTATTATATAAAAATa                                                                                    >  2:2266104/1‑128 (MQ=255)
                                              atCAAAAAATAAGCTATTAAACAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATaa                                                                                   <  1:3676108/128‑1 (MQ=255)
                                                cAAAAAATAAGCTATTAAACAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTAATTTATTAAAATaaaa                                                                                 >  2:2478744/1‑126 (MQ=255)
                                                  aaaaaTAAGCTATTAAACAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACaaa                                                                               >  2:197980/1‑128 (MQ=255)
                                                    aaaTAAGCTATTAAACAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAat                                                                             >  2:423988/1‑128 (MQ=255)
                                                      aTAAGCTATTAAACAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAatat                                                                           >  1:2787627/1‑128 (MQ=255)
                                                         aGCTATTAAACAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATAtttt                                                                        <  2:1921547/128‑1 (MQ=255)
                                                         aGCTATTAAACAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATAtttt                                                                        <  1:1644664/128‑1 (MQ=255)
                                                           cTATTAAACAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATAtttttt                                                                      <  1:3474175/128‑1 (MQ=255)
                                                            tATTAAACAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTc                                                                     <  2:3178150/128‑1 (MQ=255)
                                                             aTTAAACAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTATATTTTTATTTTATTAAAATAACAAAATATTTTTTCt                                                                    >  2:2421742/1‑128 (MQ=255)
                                                               tAAACAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTa                                                                  >  1:3610857/1‑128 (MQ=255)
                                                                aaaCAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTAc                                                                 <  2:2134525/128‑1 (MQ=255)
                                                                 aaCAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTAcc                                                                <  2:787601/128‑1 (MQ=255)
                                                                   cAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCtt                                                              <  2:473480/128‑1 (MQ=255)
                                                                      aTTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCttttt                                                           <  2:3913042/128‑1 (MQ=255)
                                                                       ttATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCtttttt                                                          >  1:935512/1‑128 (MQ=255)
                                                                        tataAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCTTTTTTa                                                         >  1:418648/1‑128 (MQ=255)
                                                                          taAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCTTTTTTAAc                                                       >  2:1788063/1‑128 (MQ=255)
                                                                           aaaaCTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCTTTTTTAACt                                                      <  2:3846723/128‑1 (MQ=255)
                                                                            aaaCTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCTTTTTTAACTa                                                     <  2:598240/128‑1 (MQ=255)
                                                                             aaCTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCTTTTTTAACTaa                                                    >  1:2216923/1‑128 (MQ=255)
                                                                             aaCTACAAAGTAAAGCAATAAAATAATAGTTATTTTGAAAATATAAACTAAAAAATCTATGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCTTTTTTAACTaa                                                    <  2:1714126/128‑1 (MQ=255)
                                                                              aCTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCTTTTTTAACTAAt                                                   <  1:1339422/128‑1 (MQ=255)
                                                                               cTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAATTATTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTATTACCATTTATAACTAATa                                                  >  2:2744429/1‑128 (MQ=255)
                                                                               cTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCTTTTTTAACTAATa                                                  >  1:3862031/1‑128 (MQ=255)
                                                                                tACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATAAAAATAACAAAAAATTTTTTCTTACATTTTTTAAataatat                                                 >  1:3916780/1‑127 (MQ=255)
                                                                                 aCAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCTTTTTTAACTAATAGa                                                >  1:1488192/1‑128 (MQ=255)
                                                                                 aCAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCTTTTTTAACTAATAGa                                                >  2:2957466/1‑128 (MQ=255)
                                                                                 aCAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCTTTTTTAACTAATAGa                                                >  2:3078622/1‑128 (MQ=255)
                                                                                 aCAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTAATTAAAATAACAAAATATTTTTTCTTACCTTTTTTAACTAATAGa                                                >  1:106346/1‑128 (MQ=255)
                                                                                  cAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATAtttt                                                                        >  2:3441674/1‑103 (MQ=255)
                                                                                  cAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCTTTTTTAACTAATAGat                                               >  1:24336/1‑128 (MQ=255)
                                                                                  cAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCTTTTTTAACTAATAGat                                               >  1:470614/1‑128 (MQ=255)
                                                                                     aGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCTTTTTTAACTAATAGAtatt                                            <  1:1699419/128‑1 (MQ=255)
                                                                                      gTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCTTTTTTAACTAATAGAtattt                                           >  1:3018458/1‑128 (MQ=255)
                                                                                        aaaGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCTTTTTTAACTAATAGAtatttat                                         >  1:1408458/1‑128 (MQ=255)
                                                                                          aGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCTTTTTTAACTAATAGATatttattt                                       >  2:1844449/1‑128 (MQ=255)
                                                                                           gCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCTTTTTTAACTAATAGATATTTAtttt                                      <  1:1983683/128‑1 (MQ=255)
                                                                                           gCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCTTTTTTAACTAATAGATATTTAtttt                                      >  2:3257344/1‑128 (MQ=255)
                                                                                              aTAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCTTTTTTAACTAATAGATATTTATTTTGaa                                   <  2:1207408/128‑1 (MQ=255)
                                                                                                aaaTTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCTTTTTTAACTAATAGATATATATTTTGAAtt                                 >  1:28463/1‑128 (MQ=255)
                                                                                                 aaTTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTATACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCTTTTTTAAATAATAGATATTTATTTTGAATTa                                >  1:1134246/1‑128 (MQ=255)
                                                                                                 aaTTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCTTTTTTAACTAATAGATATTTATTTTGAATTa                                >  2:1344409/1‑128 (MQ=255)
                                                                                                 aaTTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCTTTTTTAACTAATAGATATTTATTTTGAATTa                                >  1:767135/1‑128 (MQ=255)
                                                                                                  aTTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCTTTTTTAACTAATAGATATTTATTTTGAATTaa                               >  1:100018/1‑128 (MQ=255)
                                                                                                    tAATATTATTTTTTTAAATATAAACAAAAAAATCTTAGTTTTTAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCTTTTTTAACTAATAGATATTTATTTTGAATTAAAt                             <  1:1566282/128‑1 (MQ=255)
                                                                                                       tAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCTTTTTTAACTAATAGATATTTATTTTGAATTAAATCaa                          <  1:1239449/128‑1 (MQ=255)
                                                                                                       tAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCTTTTTTAACTAATAGATATTTATTTTGAATTAAATCaa                          >  2:1096192/1‑128 (MQ=255)
                                                                                                        aGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCTTTTTTAACTAATAGATATTTATTTTGAATTAAATCaaa                         >  1:3406679/1‑128 (MQ=255)
                                                                                                         gTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCTTTTTTAACTAATAGATATTTATTTTGAATTAAATCaaaa                        >  2:2625235/1‑128 (MQ=255)
                                                                                                          tATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCTTTTTTACCTAATAGATATTTATTTTGAATTAAATCAAAac                       >  1:2518477/1‑128 (MQ=255)
                                                                                                            tttttGAAAATATAAAGAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCTTTTTTAACTAATAGATATTTATTTTGAATTAAATCAAAacta                     <  2:2338203/128‑1 (MQ=255)
                                                                                                             ttttGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCTTTTTTAACTAATAGATATTTATTTTGAATTAAATCAAAactac                    >  2:1026554/1‑128 (MQ=255)
                                                                                                             ttttGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCTTTTTTAACTAATAGATATTTATTTTGAATTAAATCAAAactac                    <  2:2685175/128‑1 (MQ=255)
                                                                                                              tttGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCTTTTTTAACTAATAGATATTTATTTTGAATTAAATCAAAactact                   <  2:1573581/128‑1 (MQ=255)
                                                                                                              tttGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCTTTTTTAACTAATAGATATTTATTTTGAATTAAATCAAAactact                   <  2:3687376/128‑1 (MQ=255)
                                                                                                                tGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCTTTTTTAACTAATAGATATTTATTTTGAATTAAATCAAAACTACtta                 >  2:3023872/1‑128 (MQ=255)
                                                                                                                 gAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCTTTTTTAACTAATAGATATTTATTTTGAATTAAATCAAAACTACttat                >  1:1208563/1‑128 (MQ=255)
                                                                                                                 gAAAATATAAACAAAAAAATCTAAGATTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCTTTTTTAACTAATAGATATTTATTTTGAATTAAATCAAAACTACttat                <  2:3385340/128‑1 (MQ=255)
                                                                                                                  aaaaTATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCTTTTTTAACTAATAGATATTTATTTTGAATTAAATCAAAACTACttatt               <  2:1506272/128‑1 (MQ=255)
                                                                                                                     atatAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCTTTTTTAACTAATAGATATTTATTTTGAATTAAATCAAAACTACTTATTaaa            <  1:3340130/128‑1 (MQ=255)
                                                                                                                       ataAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCTTTTTTAACTAATAGATATTTATTTTGAATTAAATCAAAACTACTTATTAAAgt          <  1:2954599/128‑1 (MQ=255)
                                                                                                                            cAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCTTTTTTAACTAATAGATATTTATTTTGAATTAAATCAAAACTACTTATTAAAGTGtttt     <  1:2597961/128‑1 (MQ=255)
                                                                                                                             aaaaaaaTCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCTTTTTTAACTAATAGATATTTATTTTGAATTAAATCAAAACTACTTATTAAAGTGTTTTc    <  2:1430857/128‑1 (MQ=255)
                                                                                                                               aaaaaTCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCTTTTTTAACTAATAGATATTTATTTTGAATTAAATCAAAACTACTTATTAAAGTGTTTTCAt  <  1:1764589/128‑1 (MQ=255)
                                                                                                                               |                                                                                                                               
TTTTAAAATAATACTAGTTATAAGTTGAGATATAAGTTTAAAAAATATCAAAAAATAAGCTATTAAACAAATTATAAAACTACAAAGTAAAGCAATAAATTAATAGTATTTTTGAAAATATAAACAAAAAAATCTAAGTTTTAAACAACTTAGATTTTTATTTTATTAAAATAACAAAATATTTTTTCTTACCTTTTTTAACTAATAGATATTTATTTTGAATTAAATCAAAACTACTTATTAAAGTGTTTTCAT  >  CP016816/382258‑382512

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.