New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 = 202483150 (0.100)235 (0.150) 52/252 31.9 62.0% intergenic (+261/‑414) JCVSYN2_00840/JCVSYN2_00845 hypothetical protein/lipoprotein
?CP016816 202487 = 138 (0.090)intergenic (+265/‑410) JCVSYN2_00840/JCVSYN2_00845 hypothetical protein/lipoprotein
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 235 total aligned reads displayed.

TTAGTGTAAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAAT‑AAAAAAAAAAC‑AAT‑C‑C‑C‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP016816/202361‑202483
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑T‑TAAAA‑‑‑AAT‑‑‑AAAAAAAAAAAA‑AAAAAAA‑AACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATATAATAC  >  CP016816/202487‑202612
                                                                                                                                                                                                                                                                         
TTAGTGTAAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAAT‑AAAAAAAAAAC‑AATAC‑C‑C‑T‑TAA                                                                                                                                    >  1:3142886/1‑128
    TGTAAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAAT‑AAAAAAAAAACAAAA‑C‑C‑C‑T‑TAAAA‑‑‑At                                                                                                                             >  1:2928602/1‑127
    TGTAAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTATTTATTTTTTTATCTT‑CAAAAAT‑AAAAAAAAAACAAAA‑C‑A‑C‑T‑TAAAA‑‑‑At                                                                                                                             >  2:421207/1‑127
    TGTAAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATACTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAAT‑AAAAAAAAAAC‑AAA‑A‑C‑C‑A‑TTAAA‑‑‑AAT                                                                                                                            >  1:2916769/1‑128
    TGTAAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGAACCTCGTTATCTATTTTTTTATTTTTTTATCTT‑CACAAAT‑AAAAAAAAAAC‑AAA‑C‑A‑C‑C‑TAAAA‑‑‑AAa                                                                                                                            >  1:1912516/1‑127
        AATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAAT‑AAAAAAAAAAC‑AAT‑C‑C‑C‑C‑TTAAA‑‑‑AAT‑‑‑AAAA                                                                                                                     >  1:2978128/1‑128
         ATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTTTTTATCTT‑CACAAAT‑AAAAAAAAAAA‑AAA‑C‑A‑C‑A‑TAAAA‑‑‑AAT‑‑‑AAAAA                                                                                                                    >  1:1561484/1‑128
         ATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAAT‑AAAAAAAAAAA‑AAA‑C‑C‑C‑C‑ATAAA‑‑‑AAT‑‑‑AAAAA                                                                                                                    >  1:1731632/1‑128
         ATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTAATATTATTATCTT‑CACAAAT‑AAAAAAAAAAC‑AAT‑C‑A‑C‑A‑TTAAA‑‑‑AAT‑‑‑AAAAA                                                                                                                    >  2:2987156/1‑128
          TAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTTTTTATCTT‑CACAAATAAAAAAAAAAAA‑AAA‑C‑C‑C‑T‑TAAAA‑‑‑ATT‑‑‑AAAAA                                                                                                                    >  1:3296761/1‑128
          TAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTTTTTATCTT‑CACAAAA‑AAAAAAAAAAC‑AAT‑CAC‑C‑T‑TAAAA‑‑‑ATT‑‑‑AAAAA                                                                                                                    >  2:2870174/1‑128
           AATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAAT‑AAAAAAAAAAC‑AAA‑C‑CAC‑T‑TAAAA‑‑‑ATT‑‑‑AAAAAA                                                                                                                   >  2:2620495/1‑128
           AATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGAGATCTATTTTATTATTTATTTATCTT‑CACAAAT‑AAAAAAAAAAA‑AAA‑C‑A‑C‑A‑TAAAA‑‑‑AAT‑‑‑TAAAAAA                                                                                                                  >  1:184461/1‑128
            ATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCTTGATCTATTTTTTTATTTATTTATCTT‑CAAAAATAAAAAAAAAAAA‑AAA‑A‑A‑C‑A‑AAAAA‑‑‑AAT‑‑‑AAAAAAA                                                                                                                  >  1:629304/1‑128
            ATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTATTTATCTT‑CACAAATAAAAAAAAAAAC‑AAT‑A‑C‑A‑C‑TAAAA‑‑‑AAT‑‑‑AAAAAAA                                                                                                                  >  1:1094414/1‑128
             TAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAAT‑AAAAAAAAAAC‑AAT‑C‑C‑CAA‑TAAAA‑‑‑AAT‑‑‑AAAAAAAA                                                                                                                 >  2:1761662/1‑128
             TAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAAT‑AAAAAAAAAAA‑AAT‑CAA‑C‑T‑TAAAA‑‑‑AAT‑‑‑AAAAAAAA                                                                                                                 >  2:2602427/1‑128
             TAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑AAAAAAT‑‑AAAAAAAAAC‑AAT‑A‑C‑A‑A‑TTAAA‑‑‑AAT‑‑‑TAAAAAAAAA                                                                                                               >  2:1647043/1‑128
             TAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATACTCTTGATCTATTTTTTTATATATATATCAT‑CACAAATAAAAAAAAAAAA‑AAT‑CAA‑C‑T‑TAAAA‑‑‑AAT‑‑‑AAAAAAA                                                                                                                  >  2:449136/1‑128
              AGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAATAAAAAAAAAAAC‑AAT‑C‑C‑C‑C‑TTAAA‑‑‑AAT‑‑‑TAAAAAAAA                                                                                                                >  1:2787862/1‑128
                 GTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCTTGATCTATTTTTTTATTTGTTTATCTT‑CACAAAT‑AAAAAAAAAAC‑AAT‑C‑C‑C‑A‑TAAAA‑‑‑AAT‑‑‑TAAAAAAAAAAA‑A                                                                                                           >  2:822019/1‑128
                  TTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAAT‑AAAAAAAAAAC‑AAT‑CAC‑C‑T‑TAAAA‑‑‑ATT‑‑‑AAAAAAAAAAAA‑A                                                                                                           >  1:2611381/1‑128
                  TTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAAT‑AAAAAAAAAAC‑AAA‑CAC‑C‑T‑TAAAA‑‑‑ATT‑‑‑AAAAAAAAAAAA‑A                                                                                                           >  2:3235256/1‑128
                  TTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CAAAAAT‑AAAAAAAAAAC‑AAT‑C‑C‑C‑A‑TAAAA‑‑‑AAT‑‑‑AAAAAAAAAAAA‑AA                                                                                                          >  1:1054519/1‑128
                  TTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CAAAAAT‑AAAAAAAAAAC‑AAT‑C‑C‑A‑A‑TTAAA‑‑‑AAT‑‑‑TAAAAAAAAAAA‑AA                                                                                                          >  2:3050499/1‑128
                   TAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTATATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAAT‑AAAAAAAAACC‑AAT‑C‑C‑C‑C‑TTAAA‑‑‑AAT‑‑‑AAAAAAAAAAAA‑AAA                                                                                                         >  1:1764357/1‑128
                   TAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAAT‑AAAAAAAAAAC‑AAT‑C‑C‑C‑C‑TTAAA‑‑‑AAT‑‑‑TAAAAAAAAAAA‑AAA                                                                                                         >  1:925036/1‑128
                   TAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAAT‑AAAAAAAAAAC‑AAT‑C‑C‑C‑C‑TTAAA‑‑‑AAT‑‑‑TAAAAAAAAAAA‑AAA                                                                                                         >  1:317625/1‑128
                   TAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATATTTTTATTTGTTTATCTT‑CACAAAA‑AAAAAAAAAAA‑AAA‑CAA‑C‑T‑AAAAA‑‑‑AAT‑‑‑AAAAAAAAAAAA‑AA                                                                                                          >  1:1752800/1‑128
                    AAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCTTGATCTATTTTTTTATTTATTTATCAT‑CAAAAAT‑AAAAAAAAAAA‑AAA‑A‑A‑A‑A‑TTAAA‑‑‑AAT‑‑‑AAAAAAAAAAAA‑AAAA                                                                                                        >  1:1639473/1‑128
                    AAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAAT‑AAAAAAAAAAC‑AATAC‑C‑C‑T‑TAAAA‑‑‑ATT‑‑‑AAAAAAAAAAAA‑AAA                                                                                                         >  1:834742/1‑128
                    AAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CAAAAATAAAAAAAAAAAA‑AAT‑C‑A‑C‑A‑TAAAA‑‑‑AAA‑‑‑AAAAAAAAAAAA‑AAA                                                                                                         >  1:1889445/1‑128
                    AAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTAATCTT‑CACAAAT‑AAAAAAAAAAC‑AAT‑C‑A‑C‑A‑AAAAA‑‑‑AAT‑‑‑AAAAAAAAAAAA‑AAAA                                                                                                        >  1:1432768/1‑128
                    AAGGTTAATTAAAATACCATAAACTTAAT‑ATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAAT‑AAAAAAAAAAC‑AAT‑C‑C‑C‑C‑TTAAA‑‑‑AAT‑‑‑TAAAAAAAAAAA‑AAAAA                                                                                                       >  1:2813746/1‑128
                     AGGTTAATTAAAATACCATAAACTTAATAATTCATATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑AACAAAT‑AAAAAAAAAAC‑AAT‑C‑A‑A‑A‑TTAAA‑‑‑AAT‑‑‑TAAAAAAAAAAA‑AAAAA                                                                                                       >  2:1924852/1‑128
                      GGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAAT‑AAAAAAAAAAC‑AAT‑C‑C‑C‑C‑TTAAA‑‑‑AAT‑‑‑TAAAAAAAAAAA‑AAAAAA                                                                                                      >  2:2821333/1‑128
                      GGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAAT‑AAAAAAAAAAC‑AAT‑C‑C‑C‑A‑TTAAA‑‑‑AAT‑‑‑AAAAAAAAAAAA‑AAAAAA                                                                                                      >  1:751593/1‑128
                      GGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAAT‑AAAAAAAAAAA‑AAA‑C‑C‑C‑A‑TAAAA‑‑‑AAT‑‑‑AAAAAAAAAAAA‑AAAAAA                                                                                                      >  1:3021972/1‑128
                      GGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATACTCTTGATCTATTTATTTATTTGTTTATCTT‑CACAAAT‑AAAAAAAAAAC‑AAT‑C‑A‑C‑A‑TAAAA‑‑‑AAT‑‑‑TAAAAAAAAAAA‑AAAAAA                                                                                                      >  2:2707208/1‑128
                        TTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTATTATTTGTTTATATT‑CACAAAT‑AAAAAAAAAAC‑AAA‑A‑C‑C‑A‑TAAAA‑‑‑AAT‑‑‑TAAAAAAAAAAA‑AAAAAAA‑A                                                                                                   >  2:3253919/1‑128
                          AATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAATAAAAAAAAAAAA‑AAT‑CAA‑C‑T‑TAAAA‑‑‑ATT‑‑‑AAAAAAAAAAAA‑AAAAAAA‑A                                                                                                   >  2:2572127/1‑128
                          AATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAAT‑AAAAAAAAAAC‑AATCC‑C‑C‑T‑TAAAA‑‑‑ATT‑‑‑AAAAAAAAAAAA‑AAAAAAA‑AA                                                                                                  >  1:2539493/1‑128
                          AATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAAT‑AAAAAAAAAAC‑AAT‑C‑A‑C‑C‑TAAAA‑‑‑AAT‑‑‑TAAAAAAAAAAA‑AAAAAAA‑AAa                                                                                                 >  2:2795144/1‑127
                          AATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAAT‑AAAAAAAAAAC‑AAA‑C‑A‑C‑A‑TTAAA‑‑‑AAT‑‑‑AAAAAAAAAAAA‑AAAAAAA‑AAa                                                                                                 >  1:2681280/1‑127
                           ATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCTTTATCTATTTTTTTATTTGTTTATCTT‑CAAAAAT‑AAAAAAAAAAA‑AAT‑CAA‑A‑T‑AAAAA‑‑‑AAT‑‑‑AAAAAAAAAAAA‑AAAAAAA‑AAa                                                                                                 >  2:178224/1‑127
                           ATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAAT‑AAAAAAAAAAC‑AAT‑CAA‑C‑A‑TAAAA‑‑‑ATT‑‑‑AAAAAAAAAAAA‑AAAAAAA‑AAa                                                                                                 >  1:685879/1‑127
                            TTAAAATACCATAAACTTAATAATTCTTATAATCTAGATCATCGAGATCTATATTTTTATTTTTTTATCTT‑CAAAAAT‑AAAAAAAAAAC‑AAA‑C‑A‑A‑A‑TAAAA‑‑‑AAT‑‑‑TAAAAAAAAAAA‑AAAAAAA‑AAaaa                                                                                               >  2:2723145/1‑125
                             TAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAAT‑AAAAAAAAAAA‑AATAA‑C‑A‑A‑TAAAA‑‑‑AAT‑‑‑AAAAAAAAAAAA‑AAAAAAA‑AAaaa                                                                                               >  2:383668/1‑125
                              AAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAAT‑AAAAAAAAAAC‑AAA‑C‑C‑C‑C‑TAAAA‑‑‑AAT‑‑‑TAAAAAAAAAAA‑AAAAAAA‑AAaaaaa                                                                                             >  1:2948575/1‑123
                               AAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAAT‑AAAAAAAAAAC‑AATCC‑C‑C‑T‑TAAAA‑‑‑ATT‑‑‑AAAAAAAAAAAA‑AAAAAAA‑AAaaaaa                                                                                             >  1:3112161/1‑123
                                AATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAAT‑AAAAAAAAAAC‑AAT‑C‑C‑C‑C‑TTAAA‑‑‑AAT‑‑‑TAAAAAAAAAAA‑AAAAAAA‑AAAAAAAAA                                                                                           >  2:393669/1‑128
                                                                       ttttttaATTTTTTTATTTTTTTATTTT‑TAAAAAT‑AAAAAAAAAAA‑AATCC‑C‑C‑T‑TAAAA‑‑‑ATT‑‑‑TAAAAAAAAAAA‑AAAAAAA‑AACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATT                                                     <  1:2041781/121‑1
                                                                       ttttttTATTTTTTTATTTTTTTATTTT‑TAAAAAT‑AAAAAAAAAAA‑AAT‑T‑C‑C‑T‑ATAAA‑‑‑AAT‑‑‑TAAAAAAAAAAA‑AAAAAAA‑AACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTT                                                    <  1:2643021/122‑1
                                                                       gtgaatTATTTATTTAATTTTTTATATT‑AAAAAAT‑AAAAAAAAAAC‑AATCC‑C‑C‑T‑TAAAA‑‑‑AAT‑‑‑‑AAAAAAAAAAA‑AAAAAAA‑AACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTT                                                    <  2:2220713/122‑1
                                                                        ttttaTATTTTTTTATTTTTTTATATT‑AACAAAT‑AAAAAAAAAAA‑AATAC‑C‑C‑T‑TAAAA‑‑‑ATT‑‑‑AAAAAAAAAAAA‑AAAAAAA‑AACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTT                                                    <  2:189948/123‑1
                                                                           TCTATTTTTTTATTTTTTTATATT‑AAAAAAT‑AAAAAAAAAAA‑ATA‑C‑C‑C‑T‑TAAAA‑‑‑ATT‑‑‑‑‑AAAAAAAAAA‑AAAAAAA‑AACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTT                                              <  2:2431015/128‑1
                                                                              ATTTTTTTATTTTTTTATTTT‑AAAAAAA‑AAAAAAAAAAA‑AAA‑C‑C‑C‑C‑TTAAA‑‑‑AAT‑‑‑‑TAAAAAAAAAA‑AAAAAAA‑AACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTA                                            <  1:2460813/128‑1
                                                                              ATTATTTTATATTTTTATTTT‑AAAAAAA‑AAAAAAAAAAC‑AAT‑T‑C‑C‑A‑TTAAA‑‑‑AAT‑‑‑‑TAAAAAAAAAA‑AAAAAAA‑AACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTA                                            <  2:1466944/128‑1
                                                                               aTTTTTTTTTTTTTTATTTTATAAAAAT‑AAAAAAAAAAA‑AAA‑C‑C‑C‑A‑TAAAA‑‑‑AAT‑‑‑AAAAAAAAAAAA‑AAAAAAA‑AACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTT                                             <  1:343485/127‑1
                                                                               TTTTTTTTTTTTTTTTTAAT‑AAAAAAA‑AAAAAAAAAAA‑AAT‑C‑C‑CAT‑TAAAA‑‑‑ATT‑‑‑AAAAAAAAAAAA‑AAAAAAA‑AACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTT                                             <  2:704445/128‑1
                                                                               TTTTTTTATTTTTTTATATT‑CACAAAT‑AAAAAAAAAAA‑AATAC‑C‑C‑T‑TAAAA‑‑‑AAT‑‑‑AAAAAAAAAAAA‑AAAAAAA‑AACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTT                                             <  2:2525480/128‑1
                                                                                 TTTTTATTTTTTTATATT‑AAAAAAT‑AAAAAAAAATA‑TAT‑CAA‑C‑T‑TAAAA‑‑‑ATT‑‑‑AAAAAAAAAAAA‑AAAAAAA‑AACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAA                                           <  2:1931700/128‑1
                                                                                  TTTTTTTTGTTTATCTT‑AAAAAATAAAAAAAAAAAA‑AAA‑C‑C‑C‑T‑TAAAAATTAAA‑‑‑AAAAAAAAAAAA‑AAAAAAA‑AACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTT                                             <  2:1180043/128‑1
                                                                                  TTTTATTTTTTTTTTTT‑AAAAAAA‑AAAAAAAAAAA‑AAT‑C‑C‑C‑A‑TTAAA‑‑‑AAT‑‑‑TAAAAAAAAAAA‑AAAAAAA‑AACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAA                                         <  1:2743476/128‑1
                                                                                   TTTATTTTTTTTTTTT‑AAAAAATAAAAAAAAAAAA‑AAA‑C‑C‑C‑T‑TAAAA‑‑‑ATTA‑‑AAAAAAAAAAAA‑AAAAAAA‑AACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAA                                          <  1:309779/128‑1
                                                                                     TATTTTTTTATATT‑AAAAAAT‑AAAAAAAAAAC‑AAT‑C‑C‑A‑A‑TTAAA‑‑‑AAT‑‑‑TAAAAAAAAAAA‑AAAAAAA‑AACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAA                                      <  2:597370/128‑1
                                                                                      ATTTTTTTAAATT‑AAAAAAA‑AAAAAAAAAAC‑AAA‑CAC‑C‑T‑TAAAA‑‑‑ATTA‑‑AAAAAAAAAAAA‑AAAAAAA‑AACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATA                                       <  2:1843891/128‑1
                                                                                         ttttaaaaTT‑CAAAAATAAAAAAAAAAAA‑AAA‑C‑C‑C‑T‑TAAAA‑‑‑AAT‑‑‑AAAAAAAAAAAA‑AAAAAAA‑AACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGAT                                   <  2:785214/120‑1
                                                                                         tttaTATCTT‑CAAAAAT‑AAAAAAAAAAA‑AAA‑CTC‑C‑A‑TAAAA‑‑‑ATT‑‑‑TAAAAAAAAAAA‑AAAATAA‑AACTAAAAACAAACTCTATTTCTTAAAATTCCATATTATACCACATTTTATTTTTAAAATAAGAT                                   <  2:579669/124‑1
                                                                                            ttaaatataaaAAAA‑AAAAAAAAAAA‑AAC‑C‑C‑C‑T‑TAAAA‑‑‑ATT‑‑‑AAAAAAAAAAAA‑AAAAAAA‑AACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATT                                <  2:3142886/117‑1
                                                                                              tataataaaAAAT‑AAAAAAAAAAA‑AAT‑A‑C‑C‑C‑TTAAA‑‑‑AAT‑‑‑TAAAAAAAAAAA‑AAAAAAA‑AACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGA                              <  2:2331204/119‑1
                                                                                              taaaattaaAAAA‑AAAAAAAAAAA‑AAT‑A‑C‑C‑C‑TTAAA‑‑‑AAT‑‑‑TAAAAAAAAAAA‑AAAAAAA‑AACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGA                              <  2:3021972/119‑1
                                                                                              taaaataaaAAAA‑AAAAAAAAAAA‑AATAA‑A‑C‑T‑TAAAA‑‑‑ATTA‑‑AAAAAAAAAAAA‑AAAAAAA‑AACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATT                                <  2:629304/119‑1
                                                                                               atattaaaAAAT‑AAAAAAAAAAA‑AATAC‑A‑C‑T‑TTAAA‑‑‑AATA‑‑AAAAAAAAAAAA‑AAAAAAA‑AACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTG                               <  2:458643/120‑1
                                                                                                attaaaaAAAA‑AAAAAAAAAAA‑AAC‑A‑C‑C‑T‑TTAAA‑‑‑ATT‑‑‑AAAAAAAAAAAA‑AAAAAAA‑AACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACA                            <  2:67031/121‑1
                                                                                                aTT‑CAAAAAA‑AAAAAAAAAAA‑AATCC‑C‑C‑T‑TAAAA‑‑‑AAT‑‑‑AAAAAAAAAAAA‑AAAAAAA‑AACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACA                            <  2:2944750/127‑1
                                                                                                 attaaaAAAT‑ATAAAAAAAAA‑AAT‑T‑A‑T‑TATAATA‑‑‑ATT‑‑‑AAAAAAAAAAAA‑AAAAAAA‑AACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACA                            <  2:2360713/122‑1
                                                                                                 aataaaaaataAAAAAAAAAAA‑AAT‑C‑C‑C‑T‑TAAAA‑‑‑AAT‑‑‑AAAAAAAAAAAA‑AAAAAAA‑AACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACA                            <  1:1245407/117‑1
                                                                                                  taaaaAAAA‑AAAAAAAAAAT‑AAA‑C‑C‑C‑T‑TTAAA‑‑‑AATAA‑AAAAAAAAAAAA‑AAAAAAA‑AACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACA                            <  2:1054519/123‑1
                                                                                                   tacaAAAA‑AAAAAAAAAAA‑AATAC‑C‑A‑A‑TAAAA‑‑‑AATAAAAAAAAAAAAAAA‑AAAAAAA‑AACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGAC                             <  1:2170782/124‑1
                                                                                                     caAAAA‑AAAAAAAAAAC‑AAA‑C‑CAA‑T‑TAAAA‑‑‑ATT‑‑‑AAAAAAAAAAAA‑AAAAAAA‑AACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAAT                        <  2:3227550/126‑1
                                                                                                       AAAA‑AAAAAAAAAAA‑AAT‑CAA‑A‑T‑TATAA‑‑‑ATTA‑‑AAAAAAAAAAAA‑AAAAAAA‑AACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATA                       <  2:1732040/128‑1
                                                                                                       AAAA‑AAAAAAAAAAA‑AAA‑C‑C‑C‑A‑TAAAA‑‑‑AATA‑‑AAAAAAAAAAAA‑AAAAAAA‑AACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATAT                      <  2:2732304/128‑1
                                                                                                       AAAA‑AAAAAAAAAAA‑AAA‑A‑C‑C‑A‑TAAAA‑‑‑AAT‑‑‑‑AAAAAAAAAAA‑AAAAAAA‑AACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATAT                    <  2:714549/128‑1
                                                                                                         aaaAAAAAAAAAAA‑AAC‑C‑C‑C‑T‑TAAAA‑‑‑ATTA‑‑AAAAAAAAAAAA‑AAAAAAA‑AACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATA                     <  2:755919/125‑1
                                                                                                          attAAAAAAAAAC‑AAT‑C‑C‑C‑A‑TTAAA‑‑‑AAT‑‑‑‑ATAAAAAAAAA‑AAAAAAA‑AACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATAT                  <  1:2492272/125‑1
                                                                                                          aaAAAAAAAAAAT‑AAT‑‑‑‑‑C‑T‑TTATA‑‑‑ATT‑‑‑AAAAAAAAAAAA‑AAAAAAA‑AACTAAAAACAAAATCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATC                 <  2:1362786/126‑1
                                                                                                          T‑AAAAAAAAAAA‑AATAA‑C‑A‑T‑TAAAA‑‑‑ATTA‑‑AAAAAAAAAAAA‑AAAAAAA‑AACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATAT                    <  2:1590440/128‑1
                                                                                                           aAAAAAAAAAAA‑AATAA‑C‑C‑T‑TAAAA‑‑‑ATT‑‑‑AAAAAAAAAAAA‑AAAAAAA‑AACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATA                   <  2:946410/127‑1
                                                                                                           aAAAAAAAAAAA‑AAT‑C‑A‑C‑T‑T‑TAA‑‑‑AAT‑‑‑TAAAAAAAAAAA‑AAAAAAA‑AACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATC                 <  1:725046/127‑1
                                                                                                            AAAAAAAAAAT‑AAT‑A‑A‑T‑T‑AAAAT‑‑‑TAA‑‑‑AAAAAAAAAAAA‑AAAAAAA‑AACTAAAAACAAACTCTATTTCTAAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATC                 <  2:1752800/128‑1
                                                                                                            AAAAAAAAAAA‑TAC‑C‑A‑C‑T‑AATAA‑‑‑ATT‑‑‑AAAAAAAAAAAA‑AAAAAAA‑AACTAAAAACAAACTCTATTTCTTAAAATTCACTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATC                 <  2:1520525/128‑1
                                                                                                             AAAAAAAAAA‑ATC‑C‑C‑C‑T‑TAAAA‑‑‑ATTA‑‑AAAAAAAAAAAA‑AAAAAAA‑AACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATC                 <  2:344983/128‑1
                                                                                                              AAAAAAAAA‑AAA‑C‑C‑C‑A‑AAAAA‑‑‑ATT‑‑‑AAAAAAAAAAAATAAAAAAATAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATC                 <  2:1764357/128‑1
                                                                                                              AAAAAAAAA‑AAA‑C‑C‑A‑A‑TAAAA‑‑‑AAT‑‑‑AAAAAAAAAAAA‑AAAAAAA‑AACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTA               <  2:1632130/128‑1
                                                                                                                 AAAAAA‑AAA‑C‑A‑C‑T‑T‑AAA‑‑‑AAT‑‑‑TAAAAAAAAAAA‑AAAAAAA‑AACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATAT           <  1:409789/128‑1
                                                                                                                      aaAAT‑A‑C‑C‑A‑TAAAA‑‑‑AATTA‑AAAAAAAAAAAA‑AAAAAAA‑AACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATA          <  1:2885713/126‑1
                                                                                                                       caataC‑C‑C‑A‑TAAAA‑‑‑AATA‑‑AAAAAAAAAAAA‑AAAAAAA‑AACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATAT         <  2:925036/123‑1
                                                                                                                         aaacaC‑C‑T‑TAAAA‑‑‑ATT‑‑‑AAAAAAAAAAAA‑AAAAAAA‑AACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATAT       <  2:2652908/123‑1
                                                                                                                             acaC‑T‑TAAAA‑‑‑ATTA‑‑AAAAAAAAAAAA‑AAAAAAA‑AACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATATAA     <  2:1438649/125‑1
                                                                                                                                                                                                                                                                         
TTAGTGTAAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTT‑CACAAAT‑AAAAAAAAAAC‑AAT‑C‑C‑C‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP016816/202361‑202483
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑T‑TAAAA‑‑‑AAT‑‑‑AAAAAAAAAAAA‑AAAAAAA‑AACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATATAATAC  >  CP016816/202487‑202612

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.