BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP016816	117946 =	1754 (1.140)	52 (0.040)	41/212	31.9	3.5%	intergenic (+67/+792)	JCVSYN2_00460/JCVSYN2_00465	ABC transporter substrate‑binding protein/spermidine/putrescine ABC transporter permease
*	?	CP016816	= 117942	1416 (1.100)	52 (0.040)	41/212	31.9	3.5%	intergenic (+63/+796)	JCVSYN2_00460/JCVSYN2_00465	ABC transporter substrate‑binding protein/spermidine/putrescine ABC transporter permease
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 1807 total aligned reads displayed.

AAATTGAAGAGAAGAATGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACTATATTTAAAC  >  CP016816/117819‑118073

      aagagaagaATGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAAtattattatt                                                                                                                           <  1:2196768/128‑1 (MQ=255)

       agagaagaATGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAAtattattatta                                                                                                                          >  2:1991180/1‑128 (MQ=255)

        gagaagaATGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAAtattattattat                                                                                                                         >  2:144052/1‑128 (MQ=255)

        gagaagaATGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTATTTATAAAAATACAAATTTTAAACAGCAACAAtattattattat                                                                                                                         >  2:363772/1‑128 (MQ=255)

          gaagaaTGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAATCAATACCTCAAGGTATTTCTTATTTATAAAAATACAAAATATAAACAGCAACAAtattattattatta                                                                                                                       >  2:1672751/1‑128 (MQ=255)

          gaagaaTGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAAtattattattatta                                                                                                                       <  1:3218200/128‑1 (MQ=255)

          gaagaaTGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAAtattattattatta                                                                                                                       <  2:1400954/128‑1 (MQ=255)

           tagaaTGAAAAAAAGACTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAAtattattattattat                                                                                                                      <  2:1749450/127‑1 (MQ=255)

            agaaTGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAAtattattattattatt                                                                                                                     >  1:768616/1‑128 (MQ=255)

            agaaTGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAAtattattattattatt                                                                                                                     >  1:2590863/1‑128 (MQ=255)

            agaaTGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAAtattattattattatt                                                                                                                     <  1:2311395/128‑1 (MQ=255)

             gaaTGAAATAAAGAGTACGAGAGTAAAAATTAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAAtattattattattatta                                                                                                                    <  1:550256/128‑1 (MQ=255)

             gaaTGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAAtattattattattatta                                                                                                                    >  2:2972910/1‑128 (MQ=255)

              aaTGAAAAATAGAGTAAGAGATTAATAATAAAAAACTAAATAAATAATTTTATTATCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAAtattattattattattat                                                                                                                   <  1:1161964/128‑1 (MQ=255)

              aaTGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAAtattattattattattat                                                                                                                   >  1:2083787/1‑128 (MQ=255)

                 gAAAAAAATAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGTTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAAtattattattatttttattat                                                                                                                <  1:1999997/128‑1 (MQ=255)

                 gAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAAtattattattattattattat                                                                                                                >  2:3118391/1‑128 (MQ=255)

                  aaaaaaaGAGTACGAGAGTAAAAATAAAATAATAAATAAATAATTATATAAGCAATACATCAAGGTATTGATTTTTTATAAAAATACAAATTTTAAACAGCAACAATattattattattattattatt                                                                                                               <  2:1343117/128‑1 (MQ=255)

                  aaaaaaaGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATattattattattattattatt                                                                                                               <  1:713843/128‑1 (MQ=255)

                     aaaaGAGTTCGAGAGTAAAAATAAAAAAATAAATAAATAATTTTATTATCAATACATCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTattaat                                                                                                            <  1:940621/128‑1 (MQ=255)

                       aaGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTattaa                                                                                                             >  1:2534989/1‑125 (MQ=255)

                        agagTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTAt                                                                                                         <  2:3277120/128‑1 (MQ=255)

                           gTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCaa                                                                                                      >  1:1566102/1‑128 (MQ=255)

                             aCGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCATCAATATTATTATTATTATTATTATTAATTATCAAGc                                                                                                    >  1:2664908/1‑128 (MQ=255)

                              cGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCa                                                                                                   >  2:2745832/1‑128 (MQ=255)

                               gagaGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCat                                                                                                  >  2:2171750/1‑128 (MQ=255)

                                 gagTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCatat                                                                                                >  1:1434478/1‑128 (MQ=255)

                                  agTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCAtata                                                                                               >  2:1494941/1‑128 (MQ=255)

                                  agTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCAtata                                                                                               >  2:2927819/1‑128 (MQ=255)

                                  agTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCAtata                                                                                               >  2:2091252/1‑128 (MQ=255)

                                  agTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCAtata                                                                                               >  2:1141872/1‑128 (MQ=255)

                                   gTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTCTATAAAAATACAAATTTTTAACAGCAACAATATTATTATTATTATTATTTTTAATTATCAAGCATATaa                                                                                              >  1:1049949/1‑128 (MQ=255)

                                         ataaaaaACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTaa                                                                                        <  2:3222724/128‑1 (MQ=255)

                                            aaaaaCTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAACCAGCAACAATATTATTATTATTATTAGTATTAATTATCAAGCATATAAATTTAagat                                                                                     >  2:331053/1‑128 (MQ=255)

                                             aaaaCTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAAt                                                                                            <  1:834332/120‑1 (MQ=255)

                                             aaaaCTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATg                                                                                    >  2:92114/1‑128 (MQ=255)

                                             aaaaCTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATg                                                                                    <  1:417290/128‑1 (MQ=255)

                                             aaaaCTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATg                                                                                    >  1:1746346/1‑128 (MQ=255)

                                             aaaaCTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATg                                                                                    <  1:1808982/128‑1 (MQ=255)

                                               aaataaataaaTTATTTTATTAGCTATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGAtata                                                                               <  1:3162041/125‑1 (MQ=255)

                                               aaCTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATGAATTTAATATGat                                                                                  <  1:2772942/128‑1 (MQ=255)

                                               aaCTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGat                                                                                  <  2:203995/128‑1 (MQ=255)

                                               aaCTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGat                                                                                  <  2:587607/128‑1 (MQ=255)

                                                aaaaaataaatAATTTTATAAGAAATAACTCAATGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGata                                                                                 <  1:3064010/125‑1 (MQ=255)

                                                aCTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGata                                                                                 >  2:2624139/1‑128 (MQ=255)

                                                   aaataaatAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCATGCATATAAATTTAATATGATATAc                                                                              <  1:1626043/128‑1 (MQ=255)

                                                   aaataaatAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATAc                                                                              >  1:1357826/1‑128 (MQ=255)

                                                      taaataaTTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTa                                                                           <  2:2217927/128‑1 (MQ=255)

                                                      taaataaTTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTa                                                                           >  2:859149/1‑128 (MQ=255)

                                                        aataatTTTATAAGGAATACCTCCAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTAtt                                                                         <  1:625222/128‑1 (MQ=255)

                                                         ataatTTTATAAGCAATACCTCAAGCTATTGCTATTTAATAAAAATACAAATATTAAACAGCAACAATATTATAATTATTATTATTATTAATTAAAAATCATATAAATTTAATATGATAAACATAttt                                                                        >  2:1549362/1‑128 (MQ=255)

                                                          taatTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAATCATATAAATTTAATATGATATACATAtttt                                                                       >  1:2630248/1‑128 (MQ=255)

                                                           aatTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATCTAAATTTAATATGATCTACCTATTTTa                                                                      >  1:1933635/1‑128 (MQ=255)

                                                                tataAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGa                                                                 >  2:795198/1‑128 (MQ=255)

                                                                 ataAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGAt                                                                <  1:124161/128‑1 (MQ=255)

                                                                    aGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTaa                                                             >  1:1849347/1‑128 (MQ=255)

                                                                      cAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTaaaa                                                           >  2:2859443/1‑128 (MQ=255)

                                                                      cAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTaaaa                                                           >  2:502500/1‑128 (MQ=255)

                                                                       aaTACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGTTGATTAAAAt                                                          >  1:999659/1‑128 (MQ=255)

                                                                       aaTACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAAt                                                          <  1:2867470/128‑1 (MQ=255)

                                                                       aaTACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTAGTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTAGTTTAGGTGATTAAAAt                                                          >  2:2544591/1‑128 (MQ=255)

                                                                        aTAACTCAATGTATTGATTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATg                                                         <  2:2433002/128‑1 (MQ=255)

                                                                         tACCTCAAGGTATTGCTTTTTTATATAAATACAAATTTTAAAGAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGa                                                        <  2:650100/128‑1 (MQ=255)

                                                                         tACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGa                                                        <  2:2590863/128‑1 (MQ=255)

                                                                           ccTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGaaa                                                      >  1:2832710/1‑128 (MQ=255)

                                                                           ccTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGAATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGaaa                                                      >  2:1176582/1‑128 (MQ=255)

                                                                           ccTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTAGTAATTATCAAGCATATAAATTTAATATGATATACATATTTTTGGTGATTATAATGaaa                                                      >  1:2922387/1‑128 (MQ=255)

                                                                           ccTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAAc                                                   <  1:2972519/128‑1 (MQ=255)

                                                                             tCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGaaaaa                                                    >  1:213649/1‑128 (MQ=255)

                                                                               aaGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACg                                                  <  2:3176318/128‑1 (MQ=255)

                                                                                aGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGa                                                 >  1:2041995/1‑128 (MQ=255)

                                                                                  gTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGt                                               >  2:1082685/1‑128 (MQ=255)

                                                                                    aTTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTAtttt                                                                       <  1:1513015/102‑1 (MQ=255)

                                                                                    aTTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGTTGATTAAAATGAAAAACTAGatt                                             >  2:737225/1‑128 (MQ=255)

                                                                                      tGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTa                                           <  2:1922385/128‑1 (MQ=255)

                                                                                      tGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTa                                           <  1:2372632/128‑1 (MQ=255)

                                                                                        cTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAat                                         <  1:2409221/128‑1 (MQ=255)

                                                                                          tttttATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATaaa                                    >  2:408212/1‑128 (MQ=255)

                                                                                           ttttATAAATATACAAATTTTAAACATCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAAtata                                      <  1:1108880/128‑1 (MQ=255)

                                                                                           ttttATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAAtata                                      >  2:3053872/1‑128 (MQ=255)

                                                                                               ataAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGa                                  <  2:1844882/128‑1 (MQ=255)

                                                                                                taAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGTTGATTAAAATGAAAAACGAGTTTAAATATAAAGAt                                 >  1:1682324/1‑128 (MQ=255)

                                                                                                 aaaaaTACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGAtt                                <  2:1603619/128‑1 (MQ=255)

                                                                                                    aaTACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTaa                             <  1:1001492/128‑1 (MQ=255)

                                                                                                     aTACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTaaa                            <  2:279744/128‑1 (MQ=255)

                                                                                                     aTACAAATTTTAAACAGAAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACATATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTaaa                            <  2:2353880/128‑1 (MQ=255)

                                                                                                      tACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTaaaa                           >  1:2726264/1‑128 (MQ=255)

                                                                                                       aCAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAaac                          <  2:2282825/128‑1 (MQ=255)

                                                                                                          aaTTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAaacaac                       <  1:1299023/128‑1 (MQ=255)

                                                                                                               tAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTATAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCt                  >  2:2487848/1‑128 (MQ=255)

                                                                                                                   cAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGaaa              >  1:496435/1‑128 (MQ=255)

                                                                                                                     tcaacaaTATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACt            <  1:900473/127‑1 (MQ=255)

                                                                                                                        acaaTATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACtata         <  1:2474985/128‑1 (MQ=255)

                                                                                                                         caaTATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACTatat        <  2:1272065/128‑1 (MQ=255)

                                                                                                                           atatTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAAtata                                      >  1:3325078/1‑96 (MQ=255)

                                                                                                                           atatTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACTATAgtt      <  1:3253135/128‑1 (MQ=255)

                                                                                                                            tattattattattattattatTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACTATATTTa     >  1:312168/1‑128 (MQ=255)

                                                                                                                             attattattattattattattAATTATCAATCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACTATATTTaa    <  2:2664034/128‑1 (MQ=255)

                                                                                                                             attattattattattattattAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACTATATTTaa    <  1:381290/128‑1 (MQ=255)

                                                                                                                              ttattattattattattataaATTATCAAGCATATATATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACTATATTTaaa   <  1:2257093/128‑1 (MQ=255)

AAATTGAAGAGAAGAATGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACTATATTTAAAC  >  CP016816/117819‑118073

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.