New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 117946 =1754 (1.140)52 (0.040) 41/212 31.9 3.5% intergenic (+67/+792) JCVSYN2_00460/JCVSYN2_00465 ABC transporter substrate‑binding protein/spermidine/putrescine ABC transporter permease
?CP016816 = 117942 1416 (1.100)intergenic (+63/+796) JCVSYN2_00460/JCVSYN2_00465 ABC transporter substrate‑binding protein/spermidine/putrescine ABC transporter permease
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 1778 total aligned reads displayed.

AAGGAAATTGAAGAGAAGAATGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACTATATTT  >  CP016816/117815‑118069
                                                                                                                               |                                                                                                                               
       ttGAAGAGAAGAATGAAAAAAAGAGTACGAGAGTAACAATAAAAAACTAAATAAATAATTTTATAAGCAATACATCAAGGTATTGCTTTATTATAAAAATACAAATTTTAAACAGAAACAAtattatt                                                                                                                          >  2:1089928/1‑128 (MQ=255)
         gaagagaagaATGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAAtattattat                                                                                                                        <  2:1487748/128‑1 (MQ=255)
         gaagagaagaATGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAAtattattat                                                                                                                        >  1:948611/1‑128 (MQ=255)
           agagaagaATGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAAtattattatta                                                                                                                      >  1:1844882/1‑128 (MQ=255)
            gagaagaATGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAAtattattattat                                                                                                                     >  2:144052/1‑128 (MQ=255)
            gagaagaATGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAAtattattattat                                                                                                                     >  2:103095/1‑128 (MQ=255)
              gaagaaTGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAAtattattattatta                                                                                                                   <  2:1400954/128‑1 (MQ=255)
               aagaaTGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATTAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAAtattattattattat                                                                                                                  <  1:339642/128‑1 (MQ=255)
                agaaTGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAAtattattattattatt                                                                                                                 >  1:2535570/1‑128 (MQ=255)
                agaaTGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAAtattattattattatt                                                                                                                 >  1:911892/1‑128 (MQ=255)
                 gaaTGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAAtattattattattatta                                                                                                                <  1:1239505/128‑1 (MQ=255)
                  aaTGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAAtattattattattattat                                                                                                               <  1:2596710/128‑1 (MQ=255)
                      aaaaaaaGAGTACGAGAGTAAAAATAAAATAATAAATAAATAATTATATAAGCAATACATCAAGGTATTGATTTTTTATAAAAATACAAATTTTAAACAGCAACAATattattattattattattatt                                                                                                           <  2:1343117/128‑1 (MQ=255)
                      aaaaaaaGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATattattattattattattatt                                                                                                           >  2:2037953/1‑128 (MQ=255)
                        aaaaaGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATAATtaataa                                                                                                         <  1:1108988/128‑1 (MQ=255)
                        aaaaaGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACATCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTattaa                                                                                                         >  2:2596253/1‑128 (MQ=255)
                          aaaGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTattaatt                                                                                                       >  2:1183972/1‑128 (MQ=255)
                           aaGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTattaatta                                                                                                      >  2:3317078/1‑128 (MQ=255)
                            agagTAAGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTAt                                                                                                     <  2:307396/128‑1 (MQ=255)
                             gagTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATc                                                                                                    >  1:1990722/1‑128 (MQ=255)
                             gagTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATc                                                                                                    >  2:372647/1‑128 (MQ=255)
                               gTACTAGAGTAAAAATAAAAATATAAATAAAAAATTATATAAGAAATACATCAAGGTATTTCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCaa                                                                                                  <  2:2084371/128‑1 (MQ=255)
                               gTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCaa                                                                                                  <  1:2972910/128‑1 (MQ=255)
                               gTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCaa                                                                                                  <  1:2377178/128‑1 (MQ=255)
                               gTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCaa                                                                                                  <  1:2419325/128‑1 (MQ=255)
                                tACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAg                                                                                                 <  1:3233639/128‑1 (MQ=255)
                                 aCGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCATCAATATTATTATTATTATTATTATTAATTATCAAGc                                                                                                >  1:2664908/1‑128 (MQ=255)
                                 aCGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACTATATTATTATTATTATTATTATTAATTATCAAGc                                                                                                >  2:1745740/1‑128 (MQ=255)
                                  cGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCa                                                                                               <  1:3186945/128‑1 (MQ=255)
                                   gagaGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCat                                                                                              >  2:2171750/1‑128 (MQ=255)
                                   gagaGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCat                                                                                              >  1:1741141/1‑128 (MQ=255)
                                   gagaGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTATAAAAAAAAATAAAAATTTTAAAAATAAAAAAAAATAAAATTATTATTATAataaaataaaaatcat                                                                                              >  1:1929919/1‑120 (MQ=255)
                                    agagTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATTCAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCata                                                                                             <  2:1146885/128‑1 (MQ=255)
                                     gattaaaaataaaaaACTTAATAAATAATTTTATCATAAATACATCAAGTTATTTCTTTTTTATAAAAATAAAAATTTTAAAAAGAAAAAATATTATTATTATTATTATTATTAATTATCAAGCatat                                                                                            <  1:2198715/125‑1 (MQ=255)
                                     gagTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCatat                                                                                            >  1:1434478/1‑128 (MQ=255)
                                      agTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAAATATCAAGCTtata                                                                                           >  1:1295258/1‑128 (MQ=255)
                                         aataataaataACTAAATAAATAATTTTATAAGCAATACCTCAATGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAAt                                                                                        <  2:751764/125‑1 (MQ=255)
                                           aaataaaaaACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAAttt                                                                                      <  2:3137463/128‑1 (MQ=255)
                                            aataaaaaACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTa                                                                                     >  2:1916928/1‑128 (MQ=255)
                                            aataaaaaACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTAATTATCAAGCATATAAATTTAata                                                                                  >  1:3064280/1‑128 (MQ=255)
                                               aaaaaaCTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAata                                                                                  <  2:929098/128‑1 (MQ=255)
                                               aaaaaaCTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAata                                                                                  >  2:2433005/1‑128 (MQ=255)
                                                   aaCTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGat                                                                              <  1:2266614/128‑1 (MQ=255)
                                                      taaataaaTAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGAtata                                                                           >  1:2723513/1‑128 (MQ=255)
                                                       aaataaatAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATAc                                                                          >  1:1357826/1‑128 (MQ=255)
                                                        aataaataATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATAcc                                                                         >  1:2822945/1‑128 (MQ=255)
                                                         ataaataaTTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCt                                                                        >  1:388256/1‑128 (MQ=255)
                                                         ataaataaTTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCt                                                                        >  2:436171/1‑128 (MQ=255)
                                                          taaataaTTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTa                                                                       <  2:2217927/128‑1 (MQ=255)
                                                           aaataaTTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTAt                                                                      <  2:2668126/128‑1 (MQ=255)
                                                              taatTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAATCATATAAATTTAATATGATATACATAtttt                                                                   >  1:2630248/1‑128 (MQ=255)
                                                                    tataAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGa                                                             >  2:2488127/1‑128 (MQ=255)
                                                                    tataAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACATATTTTAGGtta                                                             >  2:2871091/1‑126 (MQ=255)
                                                                     ataAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGTTGAt                                                            >  2:1545096/1‑128 (MQ=255)
                                                                            aTACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATg                                                     <  1:729127/128‑1 (MQ=255)
                                                                             tACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGTTGATTAAAATGa                                                    >  1:2041648/1‑128 (MQ=255)
                                                                             tACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGa                                                    <  2:2940173/128‑1 (MQ=255)
                                                                             tACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATAAAGCATATAAAGTTAATATTATATACCTATATTATGTGATTAAAATGa                                                    >  1:2316077/1‑128 (MQ=255)
                                                                             tACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGaa                                                   <  1:1673186/128‑1 (MQ=255)
                                                                               ccTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGaaa                                                  >  2:819506/1‑128 (MQ=255)
                                                                                cttgaGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTTTTATTAATTATCAAGCATATAAAGTTAATATGATATACCTATATTAGGAGATTAAAATGataa                                                 >  1:564503/5‑128 (MQ=255)
                                                                                   aaGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTATGTGATTAAAATGAAAAACg                                              >  1:1807499/1‑128 (MQ=255)
                                                                                    aGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGa                                             >  2:2799122/1‑128 (MQ=255)
                                                                                     ggTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAg                                            >  1:2866795/1‑128 (MQ=255)
                                                                                      gTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGt                                           >  1:1613105/1‑128 (MQ=255)
                                                                                       tATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGtt                                          >  1:656065/1‑128 (MQ=255)
                                                                                       tATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATAAAGAATATAAATTTAATATGATATACATAATTTAGGTGATTAAAATTAAAAAAGAGtt                                          >  2:1834781/1‑128 (MQ=255)
                                                                                       tATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATAATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTCATTAAAATGAAAAACTAGta                                          >  2:512980/1‑127 (MQ=255)
                                                                                        aTTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTAtttt                                                                   <  1:1513015/102‑1 (MQ=255)
                                                                                         ttGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGtttt                                        >  2:1986474/1‑128 (MQ=255)
                                                                                          tGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTa                                       <  1:1563290/128‑1 (MQ=255)
                                                                                            cTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAat                                     <  2:884988/128‑1 (MQ=255)
                                                                                              tttttATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAatat                                   >  2:2751343/1‑128 (MQ=255)
                                                                                               ttttATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATGAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAAtata                                  <  1:520352/128‑1 (MQ=255)
                                                                                                tttATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATaa                                 <  2:3281530/128‑1 (MQ=255)
                                                                                                tttATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATaa                                 <  1:3270703/128‑1 (MQ=255)
                                                                                                 ttATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATaaa                                >  2:3181571/1‑128 (MQ=255)
                                                                                                  tataAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAg                               <  1:3125226/128‑1 (MQ=255)
                                                                                                   ataAAAATACAAATATTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATATAATATGATAAACCTATTTTAGTTGATTAAAATGAAAAACTAGATTTAATATtaata                              >  2:1662942/1‑126 (MQ=255)
                                                                                                    taAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGAt                             <  2:2625574/128‑1 (MQ=255)
                                                                                                     aaaaaTACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGAtt                            <  2:1603619/128‑1 (MQ=255)
                                                                                                     aaaaaTACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGAtt                            >  1:777909/1‑128 (MQ=255)
                                                                                                       aaaTACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTa                          >  2:616035/1‑128 (MQ=255)
                                                                                                       aaaTACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTa                          >  1:2769220/1‑128 (MQ=255)
                                                                                                        aaTACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTaa                         <  1:1001492/128‑1 (MQ=255)
                                                                                                         aTACAAATTTTAAACAGAAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACATATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTaaa                        <  2:2353880/128‑1 (MQ=255)
                                                                                                           aCAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAaac                      >  2:3007923/1‑128 (MQ=255)
                                                                                                           aCAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAaac                      <  2:2282825/128‑1 (MQ=255)
                                                                                                               aTTTTAAACAGATACTATATTATTATTTTTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAtcaaca                  <  1:2138850/128‑1 (MQ=255)
                                                                                                                 tttAAACAGCAACAATATTATTATTATTTTTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAATGCAACAAg                >  1:2081408/1‑128 (MQ=255)
                                                                                                                 tttAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAATTGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAg                >  2:688263/1‑128 (MQ=255)
                                                                                                                  ttAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGc               <  1:1162230/128‑1 (MQ=255)
                                                                                                                   tAAACAGAAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCt              <  2:3237215/128‑1 (MQ=255)
                                                                                                                    aaaCAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTg             >  1:1048958/1‑128 (MQ=255)
                                                                                                                    aaaCAGCAACAATATTATTATTATTATTATTATTAATAAACAAGAAAAAAATTTTATTATAATATACATTTTTTAGTTTATTATAATAAAAAACTAGTATTAAAATAATTATTTAAAACAACAAgatc             >  1:85051/1‑125 (MQ=255)
                                                                                                                           aacaaTATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACtat      >  2:2547018/1‑128 (MQ=255)
                                                                                                                           aacaaTATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACtat      <  1:2927819/128‑1 (MQ=255)
                                                                                                                            acaaTATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACtata     >  1:435979/1‑128 (MQ=255)
                                                                                                                             caaTATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACTatat    <  2:1272065/128‑1 (MQ=255)
                                                                                                                              aaTATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACTATAtt   <  1:2476547/128‑1 (MQ=255)
                                                                                                                               |                                                                                                                               
AAGGAAATTGAAGAGAAGAATGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACTATATTT  >  CP016816/117815‑118069

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.