BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP016816	165253 =	1165 (0.760)	215 (0.160)	100/220	16.1	18.1%	intergenic (+217/‑325)	JCVSYN2_00665/JCVSYN2_00670	tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
*	?	CP016816	= 165249	932 (0.690)	215 (0.160)	100/220	16.1	18.1%	intergenic (+213/‑329)	JCVSYN2_00665/JCVSYN2_00670	tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 1364 total aligned reads displayed.

ATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTAAAAGAATTAATTTGAACTTGTAAAAAATAGC‑TT‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTA‑TTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTTA  >  CP016816/165126‑165380

atatTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAAATAAAACTATTTTCTTTTTAGATATTTTTTTTTTATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATATC‑tt‑tt                                                                                                                                  >  1:675975/1‑128 (MQ=255)

 ttttttctttAATTAATTTATCGCACTTGTTTTAATTAGTAACAAACTAAAACTATTATATTTTTATATATTTTTTTTTTATGCAAATTTTTAAAAAATTAATTTTAAATTTTAAAAAATAGC‑tt‑ttt                                                                                                                                 <  1:393219/121‑1 (MQ=255)

 tatTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATATC‑tt‑ttt                                                                                                                                 >  2:1639670/1‑128 (MQ=255)

  atTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑tt‑tttt                                                                                                                                >  1:1662691/1‑128 (MQ=255)

    ttAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑tt‑tttttt                                                                                                                              >  1:2796651/1‑128 (MQ=255)

     tAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑tt‑ttttttt                                                                                                                             >  1:865991/1‑128 (MQ=255)

        ttttaatAATTTATAGCAATTTTATGAATTATTAATAAAAAAAAAATTTTATATTTTTTTATATTTTTTTTTTTTTCAAATTTTTAAAAAATTAATTTTAACTTGTAAAAAATAGC‑tt‑tttttttttt                                                                                                                          <  1:304211/122‑1 (MQ=255)

        tttCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATATC‑tt‑tttttttttt                                                                                                                          >  2:1664744/1‑128 (MQ=255)

        tttCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑tt‑tttttttttt                                                                                                                          >  2:802068/1‑128 (MQ=255)

          tCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑tt‑tttttttttttt                                                                                                                        >  2:146541/1‑128 (MQ=255)

          tCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑tt‑tttttttttttt                                                                                                                        >  1:2356729/1‑128 (MQ=255)

          tCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTATTTGGATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑tt‑tttgtttttttt                                                                                                                        >  1:2097150/1‑128 (MQ=255)

            aTTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑tt‑tttttttttttttt                                                                                                                      >  1:1083551/1‑128 (MQ=255)

             ttAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑tt‑ttttttttttttttt                                                                                                                     >  2:1116508/1‑128 (MQ=255)

             ttAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑tt‑ttttttttttttttt                                                                                                                     >  1:1850968/1‑128 (MQ=255)

                aTTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑tt‑ttttttttttttttttat                                                                                                                  >  2:2071913/1‑126 (MQ=255)

                 tttATCGCACTTGTATGAATTAGTAATAAAATAAAACAAATATCTTTTTATAAATTTTTTGTATATGCAAATTTTTAAAAAAATAATTTTAACTTGTAAAAAATAGC‑tt‑ttttttttttttttataat                                                                                                                 <  2:773467/128‑6 (MQ=255)

                 tttATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTTAACTTGTAAAAAATAGC‑tt‑tttttttttttttttaaaa                                                                                                                 >  1:3193734/1‑124 (MQ=255)

                 tttATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑tt‑ttttatttttttttttata                                                                                                                 >  1:1742617/1‑125 (MQ=255)

                    aTCGCACTTGTATGAATTAGTAAGAAACTAATACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGA‑TTATTTTTTTTTTTTTTTTtattt                                                                                                               >  1:245862/1‑126 (MQ=255)

                     tagCACTTTTATTAATTATTAATAAACTAAAAATATTTTATTTTTTTTTATTTTTTTTAATTTTAAATTTTTAAAAAATTAATTTTAAATTGTTAAAAATATC‑‑T‑TTTTTTTTTTTTTTTTTATAATgg                                                                                                            <  1:2637177/126‑1 (MQ=255)

                      cGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑tt‑tttttttttttttaataataaaat                                                                                                            >  2:736441/1‑117 (MQ=255)

                      cGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑T‑TTTTTTTTTTTTTTTTTATAATgta                                                                                                           >  2:1777544/1‑126 (MQ=255)

                          cTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TT‑TTTTTTTTTTTTTTTTT‑TAATGGAAata                                                                                                       >  2:2888703/1‑128 (MQ=255)

                          cTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑T‑TTTTTTTTTTTTTTTTTATAATTTAAata                                                                                                       >  1:1118841/1‑128 (MQ=255)

                          cTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑T‑TTTTTTTTTTTTTTTTTATAATTTAAata                                                                                                       >  2:3272397/1‑128 (MQ=255)

                           ttGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑T‑TTTTTTTTTTTTTTTTTATAATTTAAatat                                                                                                      >  2:948838/1‑128 (MQ=255)

                           ttGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑T‑TTTTTTTTTTTTTTTTTATAATTTAAataa                                                                                                      >  1:1599020/1‑127 (MQ=255)

                           ttGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTTATAATGTAAAtata                                                                                                     >  2:471253/1‑128 (MQ=255)

                              tttGAATTATTAATAAAATTAAAATATTATCTTTTTATATATTTTTTTTATATTAAAATTTTTTAAAAATTAATTTTTAATTGTAAAAAATATC‑‑T‑TTTTTTTTTTTTTTTTTATAATGGAAATATaaa                                                                                                   <  2:2313197/126‑1 (MQ=255)

                                ttaaatattAAGAAAATAAAAAAATTTTATTTTTATTTATTTTTTTTTTATGCAAATTTTTAAAAAATTAATTTTAACTTTTAAAAAATTG‑‑GT‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAAtt                                                                                                 <  2:2009812/120‑1 (MQ=255)

                                 taatttttaataaAATAAAAAAATTATTTTTTTTTTTATTTTTTTTTTATTCAAATTTTTAAAAAATTAATTTTTAATTTTAAAAAAAATG‑TT‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAAtt                                                                                                 <  1:1797082/121‑1 (MQ=255)

                                   attattAATAAAAAAAAAATATTTAATTTTTATATATTTTTTTTTTATTCAAATTTTTAAAAAATTAATTTTAAATTTTAAAAAATATC‑‑T‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTa                                                                                              <  1:1535249/128‑1 (MQ=255)

                                   attattAAGAAAATAAAACTATTATATTTTTATATATTTTTTTTTTATTCAAATTTTTAAAAAATTAATTTTAACTTGTAAAAAATAGC‑‑T‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTa                                                                                              <  2:1171290/128‑1 (MQ=255)

                                   aTTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑T‑TTTTTTTTTTTTTTTTTATAATTTAAAAATAAATTTTa                                                                                              >  2:2991722/1‑128 (MQ=255)

                                    ttAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑T‑TTTTTTTTTTTTTTTTTATAATGTAAATTTAAATTATAg                                                                                             >  1:758812/1‑128 (MQ=255)

                                     tAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑T‑TTTTTTTTTTTTTTTTTATAATTTAAATATAAATTTTatt                                                                                            >  1:567864/1‑126 (MQ=255)

                                     tAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑T‑TTTTTTTTTTTTTTTTTATAATTGAAATATAAATTTTatt                                                                                            >  1:309464/1‑126 (MQ=255)

                                     tAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTAgtt                                                                                           >  2:2760569/1‑126 (MQ=255)

                                     tAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGt                                                                                           >  2:2721571/1‑128 (MQ=255)

                                      aGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑T‑TTTTTTTTTTTTTTTTTATAATTTAAATATAAATTTTATGt                                                                                           >  1:2861955/1‑128 (MQ=255)

                                      aGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTTATAATTTAAATATAATTTTTattta                                                                                          >  2:3122135/1‑124 (MQ=255)

                                       gttaGAAACTAAAAATATTATATTTTTAGATTTTTTTTGTTTATTCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑‑‑TTTTTTTTTTTTTTTATAATGGAAATATAAAATTTAGGTA‑ttt                                                                                      <  2:1720827/125‑1 (MQ=255)

                                          acaaataaaaaataTTATTTTTTTATATATTTTTTTTTTATTCAAATTTTTAAAAAATTAATTTTTACTTTTAAAAAAAATCTTT‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTA‑t                                                                                        <  2:332941/121‑1 (MQ=255)

                                            aaactaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTAGGTT‑TTttgt                                                                                   >  2:258874/1‑128 (MQ=255)

                                              actaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TT‑TTTTTTTTTTTTTTTT‑‑TAATGTAAATATAAATTTTATGTA‑Tttttttt                                                                                 >  2:2845263/1‑127 (MQ=255)

                                               ctaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TT‑TTTTTTTTTTTTTTTTTATATTTTAAATATAAATTTTATTTA‑Ttttttt                                                                                  >  2:2690789/1‑128 (MQ=255)

                                               ctaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TT‑TTTTTTTTTTTTTTTTT‑TAATGTAAATAAATATTTTTGGTA‑ttttttgt                                                                                 >  1:2998627/1‑124 (MQ=255)

                                               attataatattatATTTTTATTTTTTTTTTTTATATTTAAATTTTTAAAAAATTAATTTTTAATTTTTAAAAATATA‑TT‑TTTTTTTTTTTTTTTTTATAATTGAAATATAAATTTTAGGTA‑TTttgtt                                                                                  <  2:2362059/121‑1 (MQ=255)

                                               ataaaaattTTATATTTTTATATATTTTTTTTATATGCAAATTTTTAAAAAATTAATTTTAACTTGTAAAAAATAGC‑‑‑‑‑TTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTA‑TTTTGTTGTc                                                                               <  1:136242/127‑1 (MQ=255)

                                                ataaaataTTATATTTTTAGTAATTTTTTGTATATTCAAATTTTTAAAAAATATATTTGAAATTGTAAAAAAAATC‑‑T‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTA‑TTttgttgg                                                                                <  2:3046349/126‑2 (MQ=255)

                                                    aattatttttttttATTTATTTTTTTTATATTAAAATTTTTAAAAAATTATTTTTAAATTGTAAAAAATTTC‑‑T‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTA‑TTTTGTTGTCTaa                                                                            <  1:2819500/119‑1 (MQ=255)

                                                    aatattatATTTTTATATATTTTTTGTATATTGAAATTTTTTAAAAATTAATTTTAAATTTTAAAAAATA‑‑‑TC‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTA‑TTTTGTTGTCTAAg                                                                           <  1:2016465/126‑1 (MQ=255)

                                                       attatCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑T‑TTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTAGGTA‑TTTTGTTGTCTAAGtt                                                                         >  2:629087/1‑127 (MQ=255)

                                                        ttatCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑T‑TTTTTTTTTTTTTTTTTAAAATTTAAATATAAATTTTAGTTA‑TTTTTTTTTATAATTAt                                                                        >  1:1924640/1‑128 (MQ=255)

                                                         tataTTTTTATTTATTTTTTTTTTTTTTAAATTTTTAAAAAATTAATTTTAAATTTTAAAAAATATC‑‑T‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTA‑TTTTGTTGTCTAAGTATc                                                                       <  2:1063460/128‑1 (MQ=255)

                                                             tttttAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAATTAGC‑TT‑TTTTTTTTTTTTTTTTTATAATTGAAATATAATTTTTAGGTA‑TTTTTTTTTATAATTATATaa                                                                    >  2:2482388/1‑128 (MQ=255)

                                                              ttttAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑‑TTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTAGTTA‑TTTTGTTGTGTAATTTTATaaaaaa                                                                >  1:2929195/1‑128 (MQ=255)

                                                               tttAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑T‑TTTTTTTTTTTTTTTTTATAATTAAAATATATATTTAACGTA‑TTTTGTTGTATAATTATATaaaaa                                                                 >  2:2942831/1‑128 (MQ=255)

                                                                    atatTTTTTGTTTATGAAAATTTTAAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑T‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTA‑TTTTGTTGTCTAAGTATCTAAAAAAATAg                                                            <  1:2703001/128‑1 (MQ=255)

                                                                       ttttttGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TT‑TTTTTTTTTTTTTTTTTTAAATGTAAAAATAAATTTTAGTTA‑TTTTTTTTTAAAATTATAaaaaaaaaaataa                                                          >  2:1581601/1‑123 (MQ=255)

                                                                         ttttttttattaaaaTTTTTAAAAATTTAATTTTAAATTTTAAAAAATATT‑TT‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTA‑TTTTGTTGTCTAAGTATCTAAAAAAATAGAAAg                                                        <  1:2246215/116‑1 (MQ=255)

                                                                         ttttGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑T‑TTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTATTTA‑TTTTGTTTTATAATTATAAAAAAAATTATaaatt                                                       >  2:3086593/1‑126 (MQ=255)

                                                                           ttttttttttataTTTTTAAATAATTTATTTTTTATTTTAAAAAATA‑‑‑TT‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTA‑TTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGaaa                                                    <  1:471253/116‑1 (MQ=255)

                                                                            tGTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTTAAAATTTAAATATAAATTTTATTTA‑TTTTTTTTTATATTTATATAAAAAAATATAAATTaaaa                                                   >  2:890037/1‑128 (MQ=255)

                                                                             ttttatttaaaTTTTTAAAAAATTAATTTTAAATTGTAAAAAATATT‑TT‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTA‑TTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGaaa                                                    <  2:1947985/120‑1 (MQ=255)

                                                                             gTATATGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTTAAAATGTAAATAAAAATTTTTTTTA‑TTTTTTTTTAATATTATAT‑AAAAAATAAAAATTaaaaaa                                                 >  2:2132693/1‑128 (MQ=255)

                                                                               atatGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TT‑TTTTTTTTTTTTTTTTTATATTTTAAATTTAAATTTTAGTTT‑TTTTTTTTTATAAGTATATAAAAAAATAAAAAGTaaaaa                                                  >  2:1371007/1‑128 (MQ=255)

                                                                                aattaaaaTTTTAAAAAAATTAATTTTAAATTTTAAAAAAAAG‑‑‑‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTA‑TTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAatat                                              <  1:1050773/123‑1 (MQ=255)

                                                                                  tGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TT‑TTTTTTTTTTTTTTTTTAT‑‑TGGAAATAAAAATTTTAGTTA‑TTTTGTTGTATAAGTATCTAAAAAAATAAAAAGTAAAAAATAtt                                             >  1:981675/1‑128 (MQ=255)

                                                                                  tGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑T‑TTTTTTTTTTTTTTTTTATATTTAAAATATAATTTTTATTTA‑TTTTTTTTTATAATTATATAAAAAAAtaaaaataaaaataatt                                              >  2:529745/1‑123 (MQ=255)

                                                                                  tGCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTAATAATTTAAATAAAAATTTTAGTTA‑TTTTTTTTTAAAAATAAATAAAAAAATATAAAATAAAAAatata                                             >  1:81340/1‑127 (MQ=255)

                                                                                   gCAAATTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TT‑TTTTTTTTTTTTTTTTT‑TAATTTAAATATAAATTTTAGTTT‑TTTTTTTTTATAATTATCTAAAAAAATAAAAAGTAAAAAATAtt                                             >  2:223506/1‑128 (MQ=255)

                                                                                     aaaTTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TT‑TTTTTTTTTTTTTTTTTA‑AATTTAAATATAATTTTAATTTA‑TTTTTTTTTAAAATTAAAAAAAAAAATATAAATTAAAAAATAttta                                           >  2:1307381/1‑126 (MQ=255)

                                                                                        ttttTAAAAAATTAATTTTAAATTTTAAAAAAT‑TT‑TT‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTA‑TTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTaa                                        <  2:1850968/128‑1 (MQ=255)

                                                                                        ttttAAAA‑AATTAATTTGAACTTGTAAAAAATAGC‑‑T‑TTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTAGGTA‑TTTTTTTTTCTATGTTTATAAAAAAATATAAAGTAAAAAATATTGTTaaa                                       >  2:3169373/1‑128 (MQ=255)

                                                                                        ttttAAAA‑AATTAATTTGAACTTGTAAAAAATAGC‑‑T‑TTTTTTTTTTTTTTTTAATAATTGATATATAAATTTTAGGTT‑TTTTTTTGTATAATTTTATAAAAAAAAATAAAGGAAATATTTTTGTTaat                                       >  2:392847/1‑127 (MQ=255)

                                                                                                aaattaattTGAACTTGTAAAAAATAGC‑‑T‑TTTTTTTTTTTTTTTTTATATTGGAAATATAAATTTTAGTTA‑TTTTTTTGTCTAATTATATAAAAAAATATAAATGAAAAATTATTTTTAAAATTAATa                                >  1:2549667/2‑128 (MQ=255)

                                                                                                aaattaattTGAACTTGTAAAAAATAGC‑‑T‑TTTTTTTTTTTTTTTTTATAATTTAATTTTAAATTTTAGGAA‑TTTTTTTGTATAATTATATAAAAAAATAGAAAGATAAAAATATTTTAAAAATTAATa                                >  2:2422969/2‑128 (MQ=255)

                                                                                                 aattaattTGAACTTGTAAAAAATAGC‑TT‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTT‑TTTTTTTGTATAAGTATATAAAAAAATAAAAAGTAAAAAATATTTTTAAAATTAATa                                >  2:2645322/1‑128 (MQ=255)

                                                                                                 aattaattTGAACTTGTAAAAAATAGC‑‑T‑TTTTTTTTTTTTTTTTTATAATTGAAATATAATTTTTATTTT‑TTTTTTTTTAAAATTTAATAAAAAAAAAAAAATAAAAAAATATTTTTaaatataaaaa                               >  1:713753/1‑120 (MQ=255)

                                                                                                  attaattTTTAATTGTAAAAAATA‑‑‑TT‑ATTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTA‑TTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTa                             <  1:2734860/128‑1 (MQ=255)

                                                                                                  attaattTGAACTTGTAAAAAATAGC‑TT‑TTTTTTTTTTTTTTTTTATAATTGAAATTTAATTTTTTGTTT‑TTTTTTTGTATAAGTTTATAAAAAAATAAAAAGTAAAATATATTTTTAAATTTAATaa                               >  1:2511424/1‑127 (MQ=255)

                                                                                                  attaattTGAACTTGTAAAAAATAGC‑TT‑TTTTTTTTTTTTTTTT‑‑TAATGGAAATTTAAATTTTAGGTA‑TTTTTTTGTATAAGTATGTAAAAAAATAGAAAGGAAAAAATATTGTTATATGTAATAGTa                             >  2:579784/1‑128 (MQ=255)

                                                                                                   ttaattTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTTATATTGGAAATTTAAATTTTAGGTA‑TTTTGTTGTCTAAGTATCTAAAAAAAAATAAAGAAAAAAAAATTGTTAAAATTAATagaaa                            >  1:2146758/1‑124 (MQ=255)

                                                                                                     aattTGAACTTGTAAAAAATAGC‑TT‑TTTTTTTTTTTTTTTTTATAATTGAAATAAAAATTTTAGGTA‑TTTTTTTTTATATGTATTAAAAAAAATATAAAGTAAAAAATTTTGTTAAAATTatttataa                            >  2:2195739/1‑121 (MQ=255)

                                                                                                          gAACTTGTAAAAAATAGC‑‑T‑TTTTTTTTTTTTTTTTTATAATTGAAATATAAATTTTAGGTA‑TTTTTTTTTATAATTAAATAAAAAAATAAAAAGTAAAAAATATTGTTAAAAGTAATAATAAAattat                      >  1:2294478/1‑128 (MQ=255)

                                                                                                           aaCTTGTAAAAAATAGC‑TT‑TTTTTTTTTTTTTTTTT‑TAAAGGTAATATAAAATATTTGTATTTTTTTTTTATATTTAATTAATAAAATAAAAAATAAAAATAATTTTTAAAATAAATAAAAAAataaa                      >  2:3233927/1‑125 (MQ=255)

                                                                                                               tGTAAAAAATAGC‑‑‑‑‑TTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTA‑TTTTGTTGTCTAAGTACCTAAAAAAATAGAAAGTAAAAAATATTGTTAAAAGTATTACTAAAATTATTTAATGt               >  2:2541112/1‑128 (MQ=255)

                                                                                                                    aaaaTAGC‑‑‑‑TTTTTTTTTTTTTTTTTATAATTGAAAAATAAATTTTAGTTT‑TTTTTTTTTATAAGTAAAAAAAAAAATATAAAGAAAAAAATTTTTTTAAAATTAAAAATAAAATTTTTTAATTtaaat           >  1:3132890/1‑128 (MQ=255)

                                                                                                                     aaaTAGC‑‑T‑TTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTAGTTA‑TTTTTTTTTATAATTAAAAAAAAAAAAAAAAAGAAAAAAATATTTTTAAAATTAAAAATAAAAATAtttaattttaat           >  1:142419/1‑128 (MQ=255)

                                                                                                                     aaaTAGC‑‑T‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTATGTT‑TTTTGTTTTATAATTATATAAAAAAAAAAAAAGGAAAAAATATTTTTAAAAATAATACTAAAATTAtttaattttaat           >  1:1004594/1‑128 (MQ=255)

                                                                                                                        aattttt‑tttttttttttttttttATAATGGAAATATAAATTTTAGGTA‑TTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGttaatt          <  1:331261/123‑1 (MQ=255)

                                                                                                                        aatattt‑tttttttttttttttttATAATGGAAATATAAATTTTAGGTA‑TTTTGTTGTATAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGttaatt          <  1:1299527/123‑1 (MQ=255)

                                                                                                                         tttttt‑tttttttttttttttttATAATTTAAATATATATTTTATGTA‑TTTTGTTGTCTTAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGttaatta         <  2:1529486/124‑1 (MQ=255)

                                                                                                                         attttt‑tttttttttttttttttATAATGGAAATATAAATTTTATGTA‑TTTTGTTGTCTAAGTATATAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGttaatta         <  2:125732/124‑1 (MQ=255)

                                                                                                                         aaattt‑tttttttttttttttttATAATGGAAATATAAATTTTAGGTA‑TTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGttaatta         <  2:2796651/124‑1 (MQ=255)

                                                                                                                             tt‑tttttttttttttttttATAATGGAAATATAAATTTTAGGTA‑TTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAAc     <  1:1231204/128‑1 (MQ=255)

                                                                                                                              t‑tttttttttttttttttATAATGGAAATATAAATTTTAGGTA‑TTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACt    <  1:3258044/128‑1 (MQ=255)

                                                                                                                                 ttttttttttttttttATAATGGAAATATAAATTTTAGGTA‑TTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTta  <  2:701824/128‑1 (MQ=255)

ATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTAAAAGAATTAATTTGAACTTGTAAAAAATAGC‑TT‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTA‑TTTTGTTGTCTAAGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTTA  >  CP016816/165126‑165380

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.