New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 = 437908405 (0.260)404 (0.270)
+ATAA
66/244 26.9 50.7% intergenic (‑212/+210) JCVSYN2_01985/JCVSYN2_01990 glycosyl transferase/ABC transporter permease
?CP016816 437909 = 405 (0.260)intergenic (‑213/+209) JCVSYN2_01985/JCVSYN2_01990 glycosyl transferase/ABC transporter permease
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 797 total aligned reads displayed.

CATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTTTAAAACTTAATATTTTTTAACAT  >  CP016816/437781‑438035
                                                                                                                                               |                                                                                                                                      
attttttAATATATATTATATATAAAAATTTTATTTTTAAAATAAATATTTTATTAATTGAATCATATCAAAAAACTAAATATTACATATAGA‑‑‑GTTA‑‑‑T‑‑T‑‑T‑‑‑‑‑‑atatatatatatatatatatatatatat                                                                                                                                        <  1:3094644/126‑1 (MQ=255)
 aTTTTTTATAAATATTATAAATAAAAATTTTATTTTTAAAATATATATTTTATTAAAAGAATCAAATCAAAAACCTCCATAAAAACTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑G‑‑‑‑‑‑atatatatatatatatatatatatatata                                                                                                                                       <  2:2281659/128‑2 (MQ=255)
 aTTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑G‑‑‑‑‑‑atatatatatatatatatatatatatata                                                                                                                                       >  2:596693/1‑127 (MQ=255)
 aTTTTTAATAAATATAATAAATATAAATTGTATTTTTAAAATAAATATTTTTTTATAAGAATCAAAGCAAAAAACACAATATTACCTATAGA‑‑‑GATA‑‑‑A‑‑T‑‑G‑‑‑‑‑‑atatatatatatatatatatatatatata                                                                                                                                       <  1:1247023/128‑2 (MQ=255)
    tttAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑G‑‑‑‑‑‑atatatatatatatatatatatatatatatat                                                                                                                                    >  2:370834/1‑124 (MQ=255)
    tttAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑G‑‑‑‑‑‑atatatatatatatatatatatatatatatat                                                                                                                                    >  1:1852078/1‑124 (MQ=255)
    tttAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑G‑‑‑‑‑‑atatatatatatatatatatatatatataata                                                                                                                                    >  2:1196961/1‑124 (MQ=255)
       aataaataTTAGAAATAAAAATTGTATTTTTATAATAAATATTTTATGAAATTAAGAAAATAAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑G‑‑‑‑‑‑atatatatatatatatatatatatatatatatgca                                                                                                                                 <  2:243717/128‑8 (MQ=255)
       aataaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑G‑‑‑‑‑‑atatatatatatatatatatatatatatatattaa                                                                                                                                 >  2:299785/1‑121 (MQ=255)
        ataaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑G‑‑‑‑‑‑atatatatatatatatatatatatatatatatgaaa                                                                                                                                >  2:1922172/1‑120 (MQ=255)
         tatatatTAGATATAAAAATTTTATTTTTAAAATAAATATTTTATGAAATTAATCAAATAAAAAAACTCCATATTAAATATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑T‑‑‑‑‑‑atatatatatatatatatatatatatatatatgcaag                                                                                                                               <  1:254419/125‑10 (MQ=255)
          aaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTATTAAATGAATCAAATCAAAAACCTCCATATTAACTATAGA‑‑‑GATA‑‑‑A‑‑T‑‑GAT‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAAGCGa                                                                                                                         <  2:2758423/128‑1 (MQ=255)
               ttATAAATAAATATTTTATTTTTAAAAAATATATTTTATTAAATCAATAAAATAAAAAATCTATATATTATATATAGA‑‑‑TTTAT‑‑A‑‑TAT‑‑‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAAGCGATCAGc                                                                                                                    <  1:170403/128‑1 (MQ=255)
               ttAGAAATAAAAAATGTATTTTTAAAATAAATATTTTATTTAATGAAGCAAATAAAAAAACTCCATATTATATATAGA‑‑‑GTTA‑‑‑ATTT‑‑T‑‑‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAAGCGATCAGc                                                                                                                    <  2:328058/128‑1 (MQ=255)
                tAGAAATAAAAATTGTATTGTTAAAATAAATAATTTAGGAAATGAAGCAAAGCAAAAACATACATATTACCTATAGA‑‑‑CTTA‑‑‑A‑‑T‑‑G‑‑‑‑‑‑ATATATTTATATATATATATATATATATCA‑‑‑‑GCAAGCTATCataa                                                                                                                   >  2:2364176/1‑125 (MQ=255)
                 aGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAAGCAAAGCAAAAAACTCCATATTAACTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATAT‑‑‑‑‑‑GCAAGCGATCAGCATaaaa                                                                                                              <  1:2884196/128‑1 (MQ=255)
                  gataTAAAAATTTTATTTTTAAAATAAATATTTTAGGAAATGAATCAAAGAAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑TTAT‑‑‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAAGCGATCAGCATa                                                                                                                 <  1:1282692/125‑1 (MQ=255)
                        aaaaTTGTATATTTAAAATAAATATTTTATTAAATGAAGCAAAGCAAAAAACTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATAT‑‑‑‑‑‑GCAAGCGATCAGCATAAAATGGTGaa                                                                                                       <  2:85439/128‑1 (MQ=255)
                            ttttATTTATAAAATAAATATTTTATTAAATTAATAAAATCAAAAAAATAAATATAAACTATAGATATATTT‑‑‑A‑‑TAT‑‑‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAAGCGATCAGCATAAAATGGTg                                                                                                         <  2:2693526/125‑1 (MQ=255)
                             tGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GATAT‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAAGCGATCAGCATAAAATGGTGa                                                                                                        >  2:264053/1‑128 (MQ=255)
                             tGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GATAT‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑ACAAGCGATCAACATAAAATTGTGa                                                                                                        >  1:654657/1‑128 (MQ=255)
                              gTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATATA‑‑‑GTTA‑‑‑A‑‑T‑‑GATAT‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GAAAGCGATAATCATAAACTGGTGaa                                                                                                       >  1:1084306/1‑128 (MQ=255)
                                aTTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GATAT‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAAGCGATCATCATAAAATGGTGAAAt                                                                                                     >  1:1415851/1‑128 (MQ=255)
                                aTTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTACATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATATATA‑‑‑TCAACGCTATCAGAATAAAATGGTGAAAt                                                                                                     >  2:2538616/1‑128 (MQ=255)
                                 tttttAAAATAAATATTTTAGTAAATGAATCAAAGAAAAAACCTCCATATTAAATATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATAT‑‑‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATc                                                                                              <  1:2808346/128‑1 (MQ=255)
                                 tttttAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GATAT‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAAtt                                                                                                    >  1:3230835/1‑128 (MQ=255)
                                 tttttAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GAT‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAAGAGATCAGCATAAAATTGTGAAATTTa                                                                                                  >  2:3084438/1‑128 (MQ=255)
                                 tttttAAAAATAAAATTTTAGGAAAATAAGCAAATCAAAAACCTCAATATTAACTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GATATATATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAAGCGATCAGCATAAAATGGTGaaa                                                                                                      <  1:2927865/128‑1 (MQ=255)
                                    ttAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GAT‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GAAAGCGATCAGAATAAAATGGTGAAATTTAGAt                                                                                               >  1:2270540/1‑128 (MQ=255)
                                     tAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATTTTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GATATATATATATATATATATATATATATATATAT‑‑‑‑‑‑ACAAGCGATCAGCATAAAATGGTGATATTTa                                                                                                  >  2:2947682/1‑128 (MQ=255)
                                     tAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GATAT‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GAAAGATATCAAAATAAAATGGTTAAATTTAGa                                                                                                >  2:1873361/1‑128 (MQ=255)
                                     tAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATAA‑‑‑‑‑‑ACTAGATATGATAATAAAATTGTGAATTATAGAtgtg                                                                                            >  2:1339030/1‑128 (MQ=255)
                                       aaataaatATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GAT‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAAGCGATCATCATAAAATGGTGAAATATAGATCTg                                                                                            >  1:3312391/1‑128 (MQ=255)
                                         ataaataTTTTAGGAAATGAAGCAAATCAAATAGATATATATTACCTATAGA‑‑‑GTTT‑‑‑A‑‑T‑‑GTTTT‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTg                                                                                            <  2:1407570/128‑1 (MQ=255)
                                           aaataTTTTATTAAATGAATAAAATAAAAAAGATCCATATTTACTATAGA‑‑‑GTTATTTA‑‑TAT‑‑‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAg                                                                                          <  2:144513/128‑1 (MQ=255)
                                           aaataTTTTAGTAAATGAATCAAATCAAAAACCTCTATATTAACTATAGA‑‑‑GATA‑‑‑A‑‑T‑‑GAT‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGtt                                                                                        <  2:1062213/128‑1 (MQ=255)
                                           aaataTTTTAGGAAATGAAGCAAAGAAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GATAT‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAg                                                                                          <  2:1813316/128‑1 (MQ=255)
                                             atatTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GAT‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GTAAGCGATCATCATAAAATGGTGAAATTTAGATCTGAGTTgg                                                                                      >  1:1484965/1‑128 (MQ=255)
                                                ttttAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GATAT‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAAGCGATCAGCATAAAATGGAGAAATTTAGATCTGAGTTGGt                                                                                     >  2:3048138/1‑128 (MQ=255)
                                                 tttAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GATAT‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAAGCGATCAGCATAAAATGGTGATATTTATATCTGAGTTGTTc                                                                                    >  2:148897/1‑128 (MQ=255)
                                                 tttAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GATAT‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GAAAGCGATCAGCATAAAATGGTGATTTATAGATCTGAGTTGGTc                                                                                    >  1:2999285/1‑128 (MQ=255)
                                                   tattaaaTGAAGCAAAGAAAAAACCTCCATATTAACTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GAT‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTaa                                                                                <  1:17984/124‑1 (MQ=255)
                                                    atgaaattactcaaagaaaaAAACTCAATATTACATATAGA‑‑‑GTTT‑‑‑C‑‑T‑‑GAT‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTaaa                                                                               <  1:2081049/117‑1 (MQ=255)
                                                    aGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GAT‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAAGATATCATCATAAAATGGTTAAATTTAGATCTGAGTTTGTCTTata                                                                               >  2:1954472/1‑126 (MQ=255)
                                                       aaaTGACTCAAATCAAAAACCTCTATATTAACTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑‑‑‑‑‑‑‑‑‑TATATATATATATATATATATATAT‑‑‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGtt                                                                      <  1:2573431/128‑1 (MQ=255)
                                                         aTGAAGCAAAGCAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GAAAGCGATCAGCATAAAATTGTGAAATTTAGATCTGAGTTGGTCTTAAATTTTTAg                                                                        >  2:785157/1‑128 (MQ=255)
                                                         aTGAAGCAAAGCAAAAACCTCCAAAATACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GAT‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑ACTAGATATCAGAATAAAATGGAAAAATTTAAATCAGATTTGGTGATAAATTTGt                                                                          >  1:1375647/1‑128 (MQ=255)
                                                              gcaaagaaaaCACCTACATATTATATATAGA‑‑‑GTTA‑‑‑T‑‑T‑‑GAT‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGttt                                                                     <  1:1002922/128‑1 (MQ=255)
                                                                aaagcaaaAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑G‑‑‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATAT‑‑‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAg                                                           <  2:54409/128‑1 (MQ=255)
                                                                 aagcaaaAACCTCCATATTATCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GATAT‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGtttt                                                                    <  1:558069/128‑1 (MQ=255)
                                                                  agcaaaAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑TCAAGCGATCAGAATAAAATGGTGAATATTATATCTGATTTTGTATTAAATTTGTATTTtttattt                                                               >  2:465514/1‑128 (MQ=255)
                                                                   gcaaaAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATATATATAAGCAAGCTATCAGAAAAAACTGGTTATATTTATATATGAGTTTGTCTTATATTTGTtttttt                                                                    >  1:2956479/1‑128 (MQ=255)
                                                                    caaaAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GATAT‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAAGCGATCAGCATAAAATGGTGATATTTAGATCTGAGTTGGTCTTAAATGTGTAGTTtttat                                                                 >  2:910672/1‑128 (MQ=255)
                                                                      aaaaCCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GATAT‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑TCAAGATATCAGCATAAAATTGTGATATATATATCTGAGTTTCTCTTAAATTTGTAGTTtttattt                                                               >  2:1021748/1‑128 (MQ=255)
                                                                         aCCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GATAT‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑TCAAGCTATCATAAAAAAATGGTTAAATTTATATCTTAGTTGGTGTAAATTTTTTATTTTTTATTtata                                                            >  2:2094979/1‑128 (MQ=255)
                                                                         aCCTCCATATTAACTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GATAT‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAAGCGATCAGCATAAAATAGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTtata                                                            <  2:1528057/128‑1 (MQ=255)
                                                                           cTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GATAT‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTATTAAATTTGTAGTTTTTATTTATAGt                                                          >  1:2371998/1‑128 (MQ=255)
                                                                            tCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GAT‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GAAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTTGTCTTAAATTTGTAGTTTTTATTTATAGTTta                                                       >  2:2000277/1‑128 (MQ=255)
                                                                               atatTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GATAT‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAAGCGATCAGCATAAAATTGTGAAATTTATATCTGAGTTTGTCTTAAATTTTTAGTTTTTATTTATAGTTtat                                                      >  2:645668/1‑128 (MQ=255)
                                                                               atatTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GATAT‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GATAGAGATCAGAATAAAATGGTGATATTTAGATCTGAGTGTGTCTGATATTTTTTTTTTTTATTTATATTTtat                                                      >  1:1158395/1‑128 (MQ=255)
                                                                                 atTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GATAT‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAAGCGATCAGCATAAAATTGAGATATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATaa                                                    >  1:3791/1‑128 (MQ=255)
                                                                                 atTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAAGCTATCAGCATAATATTGTTAAATTTATATATGAGTTTTTCTTAAATTTTTATTTTATATTTATAGTTTATAAAGtt                                                >  1:3049212/1‑128 (MQ=255)
                                                                                  ttACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GATAT‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAATCGATCAGCATAATATGGTGAGATTTTGATCTGAGTTGGTCTTAATTTTTTAGTGTTTATTTATAGTTTATaaa                                                   >  1:2473218/1‑128 (MQ=255)
                                                                                  ttACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GATAT‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTATATATGAGTTGGTCTTAAATTTGTAGTTTTTATATATATTTTATaaa                                                   >  2:1595225/1‑128 (MQ=255)
                                                                                  ttACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATATATATAAGCAAGCGATCAGCATAAAATGTTGAAATATATATCTGAGTTTGTCTTAAATTTTTAGTTTTTATATATATTTtata                                                     >  2:1698177/1‑128 (MQ=255)
                                                                                  ttACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGTTCTTAAATTTTTAGTTTTTATTTATAGTTTATATAGTta                                               >  2:744116/1‑128 (MQ=255)
                                                                                   tACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑GAT‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GAAAGCGATCAGAATAAAATGGTGAACTTTATATCTTATTTGTTCTTAAATTTTTAGTTTTTATTTATAGTTTATAAAGtt                                                >  2:2151344/1‑128 (MQ=255)
                                                                                           ga‑‑‑gTTA‑‑‑A‑‑T‑‑GAT‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAAttt                                        <  1:31129/128‑1 (MQ=255)
                                                                                                          attgatatatatatatatatatatatatatatatatat‑‑‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTa                                       <  1:2667635/118‑1 (MQ=255)
                                                                                                            aatgatatatatatatatatatatatatatatatat‑‑‑‑‑‑GAAAGAGATCAGAATAAAATGTTGAAATTTTGATCTGAGTTGGTATTTTATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATTATTTAGa                                     >  2:1730317/9‑128 (MQ=37)
                                                                                                              ttatatatatatatatatatatatatatatatat‑‑‑‑‑‑GCAAGAGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAtt                                   <  1:2621505/122‑1 (MQ=255)
                                                                                                               tatatatatatatatatatatatatatatatat‑‑‑‑‑‑TAAAGAGATAAAAAAAAAATTGTGAAATATATATATGAGTTTGTCATAAATTTGTATTTTTTATTTATATTATATAAATTTTATAATTTATAttt                                  >  1:1196902/6‑128 (MQ=255)
                                                                                                               gatatatatatatatatatatatatatatatat‑‑‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAttt                                  <  1:1328912/123‑1 (MQ=255)
                                                                                                                 tatatatatatatatatatatatatatatat‑‑‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTTGTGTTAAATTTGTAGTTTATATTTATAGTTGATAAAGTTAATAATTTAGAttttt                                >  2:2036894/4‑128 (MQ=255)
                                                                                                                 tatatatatatatatatatatatatatatat‑‑‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAttttt                                <  2:3230835/125‑1 (MQ=255)
                                                                                                                 tatatatataaatatatatatatatatatat‑‑‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAttttt                                <  1:2176124/125‑1 (MQ=255)
                                                                                                                  atatatatatatatatatatatatatatat‑‑‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTa                               <  2:2872227/126‑1 (MQ=255)
                                                                                                                  atatatatatatatatatatatatatatat‑‑‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTa                               >  1:1577356/3‑128 (MQ=255)
                                                                                                                  atatatatatatatatatatatatatatat‑‑‑‑‑‑GAAAGCGATCAGAATAAAATTGTGATATATATATCTGAGTTGGTCTTAAATTTTTATTTTTTATTTATAGTTTATAAAGTTAATAATTTATAtttttt                               >  1:516909/3‑127 (MQ=255)
                                                                                                                  atatatatatatatatatatatatatatat‑‑‑‑‑‑ACAAGCGATAAGAATAAAATTGTTAAATTTAGATATGAGTTGGTCTTAAATTTGTAGTTTTTATTTATTTTTTATAAATTTAATAATTTAGATTTTTa                               >  1:634050/3‑128 (MQ=255)
                                                                                                                   tatatatatatatatatatatatatatat‑‑‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTaa                              <  2:1631564/127‑1 (MQ=255)
                                                                                                                    atatatatatatatatatatatatatat‑‑‑‑‑‑GCTAGCGCTCAGAATAAATTTGTGATATTTATATCTGTGTTTTTCTTAAATTTGTAGTTTTTATATATAGTTTATAAAGTTAATAATTTAGATTTTTTat                             >  2:699864/1‑128 (MQ=255)
                                                                                                                      atatatatatatatatatatatatat‑‑‑‑‑‑GCAAGCGATCAGCATAAAATTGTGATATTTAGATCTGAGTTGGTATTAAATTTTTTGTTTTTATTTATAGTTTATAAAGTTAATTATTTATATTTTtattat                           >  1:2734648/1‑128 (MQ=255)
                                                                                                                       tatatatatatatatatatatatat‑‑‑‑‑‑GCAAGCGATCAGCATAAAATGGTGATATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATAtt                          >  2:1139636/1‑128 (MQ=255)
                                                                                                                          atatatatatatatatatatat‑‑‑‑‑‑GCAAGCGCTCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTGTTAAATTTGTATTTTTTATTTATAGTTTATAAATTTAATAATTTAGATTTTTAATTTTTTa                       >  1:1621308/1‑128 (MQ=255)
                                                                                                                          atatatatatatatatatatat‑‑‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTTTa                       <  1:1991163/128‑1 (MQ=255)
                                                                                                                           tatatatatatatatatatat‑‑‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTTTaa                      <  1:1923196/128‑1 (MQ=255)
                                                                                                                           tatatatatatatatatatat‑‑‑‑‑‑GCAAGCGAGCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTTTaa                      <  1:453481/128‑1 (MQ=255)
                                                                                                                            atatatatatatatatatat‑‑‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTTTaaa                     <  1:833499/128‑1 (MQ=255)
                                                                                                                            atatatatatatatatatat‑‑‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTTTaaa                     <  2:2220810/128‑1 (MQ=255)
                                                                                                                             tatatatatatatatatat‑‑‑‑‑‑GCAATCGATCATCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTTTaaaa                    <  2:2583154/128‑1 (MQ=255)
                                                                                                                             tatatatatatatatatat‑‑‑‑‑‑GCAAGCGATCAGCATAAAATGGAGAAATTTATATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATATTTTATAAAGTTAATAATTTAGATTTTTAATATTTTaaaa                    >  1:717523/1‑128 (MQ=255)
                                                                                                                              atatatatatatatatat‑‑‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGAGCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTTTAAAAc                   <  1:2415258/128‑1 (MQ=255)
                                                                                                                                  atatctatatatat‑‑‑‑‑‑GCCAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTAGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTTTAAAACTTaa               <  2:1249459/128‑1 (MQ=255)
                                                                                                                                  atatatatatatat‑‑‑‑‑‑GCAAGCGATAAGCATAAAATCGTGTAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATTATTTAGATTTTTAATATTTTAAAACTTaa               <  2:1375647/128‑1 (MQ=255)
                                                                                                                                     tatatatatat‑‑‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTTTAAAACTTAatat            <  2:419886/128‑1 (MQ=255)
                                                                                                                                     tatatatatat‑‑‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTTTAAAACTTAatat            <  1:916575/128‑1 (MQ=255)
                                                                                                                                            atat‑‑‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTTTAAAACTTAATATTTTTTaa     <  2:3118275/128‑1 (MQ=255)
                                                                                                                                               t‑‑‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATGTAGCTCTGAGGTGGTGTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTTTAAAACTTAATATTTTTTAACAt  <  1:3181142/128‑1 (MQ=255)
                                                                                                                                               t‑‑‑‑‑‑GCAAGAGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTTTAAAACTTAATATTTTTTAACAt  <  1:791751/128‑1 (MQ=255)
                                                                                                                                               |                                                                                                                                      
CATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGA‑‑‑GTTA‑‑‑A‑‑T‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATAT‑‑‑‑‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTTTAAAACTTAATATTTTTTAACAT  >  CP016816/437781‑438035

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.