New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 437885 =695 (0.610)49 (0.050) 28/204 21.6 8.4% intergenic (‑189/+233) JCVSYN2_01985/JCVSYN2_01990 glycosyl transferase/ABC transporter permease
?CP016816 = 437880 510 (0.560)intergenic (‑184/+238) JCVSYN2_01985/JCVSYN2_01990 glycosyl transferase/ABC transporter permease
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 742 total aligned reads displayed.

TTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATAT‑‑ATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTT  >  CP016816/437759‑438012
                                                                                                                                    |                                                                                                                                 
 tATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatata                                                                                                                                 >  2:89690/1‑128 (MQ=255)
    ttttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATATTTAAAATAAATATATTAGGAAATGAAGCAAAGAAAAAACCTCAATATTACCTATAGATTTAAT‑‑G‑‑‑‑atatatatat                                                                                                                              >  2:1847206/1‑128 (MQ=255)
      ttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatat                                                                                                                            >  2:2076796/1‑128 (MQ=255)
       tGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATTAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatata                                                                                                                           >  1:1558151/1‑128 (MQ=255)
       tGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatata                                                                                                                           >  1:854304/1‑128 (MQ=255)
          aGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatat                                                                                                                        >  2:663239/1‑128 (MQ=255)
          aGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatat                                                                                                                        >  2:92756/1‑128 (MQ=255)
           gTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatata                                                                                                                       >  2:1992404/1‑128 (MQ=255)
            ttGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAAAGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatat                                                                                                                      <  1:386274/128‑1 (MQ=255)
             tGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAATCAAAGAAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatata                                                                                                                     <  2:1794393/128‑1 (MQ=255)
              gTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatat                                                                                                                    >  2:1660779/1‑128 (MQ=255)
                aaGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATATCCTATAGAGTAAAT‑‑G‑‑‑‑atatatatttatatatatataa                                                                                                                  >  2:1919907/1‑127 (MQ=255)
                 aGTTTAATTTTTTATAAATAATTTACATTAAAATTTATTTTTTATAATATATATTTTAGGATAAGAAGACACTCTAAAACCTCCATATTTCCTATAGAGTTATT‑‑G‑‑‑‑atatatatatatatatatatata                                                                                                                 <  2:1595881/128‑1 (MQ=255)
                   tttCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatatatat‑‑a                                                                                                             >  1:294712/1‑128 (MQ=255)
                    ttCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatatatat‑‑at                                                                                                            >  1:1756826/1‑128 (MQ=255)
                     tCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatatatat‑‑ata                                                                                                           >  1:213997/1‑128 (MQ=255)
                     tCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTAACTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatatatat‑‑ata                                                                                                           >  1:2007811/1‑128 (MQ=255)
                       aTTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAATCAAATCAAAAACCTCCATATTAACTATATAGTTAAT‑‑G‑‑‑‑atatatatatatataattatatat‑‑atgaa                                                                                                         >  2:1942102/1‑125 (MQ=255)
                        tttttAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATAT‑‑ATATGc                                                                                                        <  1:1363196/128‑1 (MQ=255)
                        tttttAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTACATATTACATATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatatatat‑‑atataa                                                                                                        >  2:495175/1‑126 (MQ=255)
                          tttAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatatatat‑‑atataaaa                                                                                                      >  1:1153346/1‑124 (MQ=255)
                            taataaATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCATAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATAT‑‑ATATTCTAGc                                                                                                    >  1:158871/1‑128 (MQ=255)
                            taataaATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatatatat‑‑atgaaagcga                                                                                                    >  1:1648604/1‑120 (MQ=255)
                            taataaATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATAT‑‑ATATGAAAGc                                                                                                    >  1:724549/1‑128 (MQ=255)
                             aataaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATTAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatatatat‑‑atattatagag                                                                                                   >  2:726831/1‑121 (MQ=255)
                              ataaataTTATAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAATCAAAGAAAAAAACTCCATATTACCTATAGAGTTAAT‑‑T‑‑‑‑ATATATATATATATATATATATAT‑‑ATATGCAAGCGa                                                                                                  <  1:1798816/128‑1 (MQ=255)
                                 aataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGATTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATAT‑‑ATATTCAAGCGATCa                                                                                               >  1:2290754/1‑128 (MQ=255)
                                 aataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATAT‑‑ATATGCAAGCGATCa                                                                                               >  1:647092/1‑128 (MQ=255)
                                 aataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATAT‑‑ATATGCAAGCGATCa                                                                                               >  1:1474269/1‑128 (MQ=255)
                                 aataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATAT‑‑ATATGCAAGCGATCAGc                                                                                             >  2:1504766/1‑128 (MQ=255)
                                 aaatttATAAATAAAAATTTTTTTTTTAATATATATATTTTATTAATTGAATAATATAAAAAATCTCTATATAAAATATAGAGATAAT‑‑G‑‑‑‑‑T‑TATATATATATATATATATAT‑‑ATATGCAAGCGATCAGc                                                                                             <  1:1976414/124‑1 (MQ=255)
                                  atatTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAATAAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATAT‑‑ATATGCAAGCGATCAGCa                                                                                            <  1:1526426/128‑1 (MQ=255)
                                       aGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATAT‑‑ATATGCAAGCGATCAGCATAAAAtt                                                                                     >  2:1380888/1‑127 (MQ=255)
                                         aaaTAAAAATTGTATTTTTAAAATAAATATTTTATGAAATGAATAAAATAAAAAACATACATATTAAATATATAGTTAAT‑‑T‑‑‑‑ATATATATATATATATATATATAT‑‑ATATGCAAGCGATCAGCATaaaa                                                                                       <  2:1968891/128‑1 (MQ=255)
                                         aaaTAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATAAATATGCAAGCTATCAGAATaa                                                                                         >  2:2029772/1‑128 (MQ=255)
                                          aaTAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATA‑‑‑A‑ATGCAAGCTATCATCATAAAAtta                                                                                    >  2:1682343/1‑126 (MQ=255)
                                            tAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATAT‑‑ATATGCAAGCTATCAGCATAAAATgg                                                                                    >  1:999826/1‑128 (MQ=255)
                                              aaaaTTTTTTTTTTAAAATAAATATTTTATTAAATGTAGAAAATAAAAAAACTCTATATTAACTATAGAGTTAAT‑‑T‑‑‑‑TTATATATATATATATATATATAT‑‑ATATGCAAGCGATCAGCATAAAATGGTg                                                                                  <  2:1107933/128‑1 (MQ=255)
                                              aaaaTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATAT‑‑ATATGAAAGCGATCAGCATAAAAtcttg                                                                                  >  1:1716963/1‑124 (MQ=255)
                                               aaaTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATAT‑‑ATATGCAAGCGATCAGAATAAAATTGTGa                                                                                 >  2:1887161/1‑128 (MQ=255)
                                                aaTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACATATAGATTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATAT‑‑ATATGAAAGCGATCAGAATAAAATTGTGag                                                                                >  1:597289/1‑127 (MQ=255)
                                                 aTTGTATTTTTATAATAAATATTTTAGGAAATGAAGAAAAGCAAAAACCTCAATATTACCTATAGAGTTAAT‑‑G‑‑‑‑TTATATATATATATATATATATAT‑‑ATATGCAAGCGATCAGCATAAAATGGTGaaa                                                                               <  2:333687/128‑1 (MQ=255)
                                                  ttGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATAT‑‑ATATGCAAGCGATCAGCATAAAATGGTGAAAt                                                                              <  2:1528461/128‑1 (MQ=255)
                                                  ttGAATTTTTAAAATAAATATTTTAGGAAATGAAGCTAAGCAAAAATCTCAATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATAT‑‑ATATGCAAGCGATCAGCATAAAATGGTGAAAttt                                                                            <  1:247499/128‑1 (MQ=255)
                                                    ttATTTTTTTAATAAATATTTTTTGTAATGTTTCAAATCTAAAAAATCTATATTTACTATAGAGTTATTTAT‑‑‑‑ATATATATATATATATATATATAT‑‑ATATGCAAGCGATCAGCATAAAATGGTGAAAt                                                                              <  2:966765/127‑1 (MQ=255)
                                                      aTTTTTAAAATAAATATTTTAGTAAATGAATCAAAGAAAAAACCTCAATATTACCTATAGAGTTAAT‑‑T‑‑‑‑ATATATATATATATATATATATAT‑‑ATATGCAAGCGATCAGCATAAAATGGTGAAATTTAg                                                                          <  1:222177/128‑1 (MQ=255)
                                                       tttttAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATAT‑‑A‑A‑GAAAGCGATCAGCATAAAATGGTGATATTTAGATc                                                                       >  1:1024170/1‑128 (MQ=255)
                                                           tAAAATAAATATTTTATGAAATGAATCAAAGCAAAAACCTCTATATTAACTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATAT‑‑ATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAg                                                                   <  2:2434108/128‑1 (MQ=255)
                                                           tAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑GAT‑‑ATATATATATATATATATATATAT‑‑ATATGAAAGCGATCAGCATAATATTGTGATATTTatctc                                                                       >  2:1723790/1‑124 (MQ=255)
                                                            aaaaTAAATATTTTAGGAAATGAATCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATAT‑‑ATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGa                                                                    <  1:2087715/128‑1 (MQ=255)
                                                             atataaataTTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATAT‑‑ATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGtt                                                                 <  1:2182987/126‑1 (MQ=255)
                                                             aaataaatATTTTAGTATATTAATATAATCAAAAAAATCAATATTATCTATATAGTTAAT‑‑T‑‑‑‑ATATATATATATATATATATATAT‑‑ATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAg                                                                   <  1:956880/128‑1 (MQ=255)
                                                             aaataaatATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATAT‑‑ATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAg                                                                   >  1:76216/1‑128 (MQ=255)
                                                               ataaataTTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATAT‑‑ATATGCAAGCGATCAGCATAAAATGTTGAAATTTAGATCTGAGTTgt                                                               >  2:42611/1‑127 (MQ=255)
                                                                taaataTTTTATGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑‑‑ATATATATATATATATAT‑‑ATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTa                                                          <  1:1412814/128‑1 (MQ=255)
                                                                   atatTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑GATATATATATATATATATATATATATAT‑‑ATATGCAAGCTATCAGCATAAAATGTTGAAATTTAGATCTGAGtt                                                                 >  1:1195430/1‑128 (MQ=255)
                                                                   atatTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATAT‑‑ATATGCAAGCTATCAGCATAAAATGGTGATATTTATATCTGAGTTGGTc                                                             >  2:571995/1‑128 (MQ=255)
                                                                      ttttATGATATGAAGCAAAGATAATACCTACATATTATCTATAGATTTAA‑‑‑‑‑‑‑‑AGATATATATATATATATATATAT‑‑ATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTaaa                                                        <  1:2346392/128‑1 (MQ=255)
                                                                        ttATGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATAT‑‑ATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTaaa                                                        <  1:91666/128‑1 (MQ=255)
                                                                           gtaaattaataaaagcaaaAACATCCATATTACATATAGAGATAAA‑‑G‑‑‑‑ATATATATATATATATATATATAT‑‑ATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAAttt                                                     <  2:702166/117‑1 (MQ=255)
                                                                            gAAATGAAGAAAATCAATAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATAT‑‑ATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTg                                                    <  2:2129835/128‑1 (MQ=255)
                                                                              aaTGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATAT‑‑ATATGCAAGCGATCATCATAAAATGGTGAAATTTAGCTCTGAGTTTCTCTTATATTTGTa                                                  >  2:2331858/1‑128 (MQ=255)
                                                                              aaTGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATAT‑‑AT‑T‑AAAGATATCATAATAAAATGGTGATATTTAGATCTGAGTTGGTCTTAAATTTTTAGt                                                >  2:53209/1‑128 (MQ=255)
                                                                                tGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑GATATATATATATATATATATATATATAT‑‑ATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGCTCTGAGTTGGTCTTTAATTTg                                                    >  1:1918419/1‑128 (MQ=255)
                                                                                 gAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATAT‑‑ATATGAAAGCGATCAGCATAAAATGTTGAAATTTAGATATGAGTTTGTGTTAAATTTGTAGtt                                               >  1:1275830/1‑128 (MQ=255)
                                                                                  aagcaaagcaAAAACCTCCATATTACCTATAGAGTTAAT‑‑GAT‑‑ATATATATATATATATATATATAT‑‑ATATGAAAGCTATCATAATAAAATTGTGAAATATAGATCTGAGTTTGTATTAAATATGTAGt                                                >  1:1113332/1‑128 (MQ=255)
                                                                                    gcaaagcaaaAACCTCAATATTACCTATAGAGTTAAT‑‑GAT‑‑ATATATATATATATATATATATAT‑‑ATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGttt                                              <  1:1934428/128‑1 (MQ=255)
                                                                                     caaagcaaaAACCTCCATATTACCTATAGAGTTAAT‑‑GAT‑‑ATATATATATATATATATATATAT‑‑ATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGATTTTGTCTTAAATTTGTAGtttt                                             >  1:1695521/1‑128 (MQ=255)
                                                                                          caaaAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATAT‑‑ATATGAAAGCGATCAGAAAAAAATGGTTAAATTTATATCTGAGATGGTCTTAAATTTGTAGATTttatttat                                      >  1:488752/1‑128 (MQ=255)
                                                                                           aaaaaCCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑‑‑ATATATATATATATATAT‑‑ATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTATATTTGTAGTTTTTATTTATAGTTtat                               >  2:2194976/1‑128 (MQ=255)
                                                                                             aaaCCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATAT‑‑ATATGATAGCTATAAGCATAAAATGGTGAAATTTATATCTGAGTATGTCTTAAATTTGTAGTTTTTATTTATTGttt                                 >  2:1362911/1‑128 (MQ=255)
                                                                                               aCCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATAT‑‑ATATGCAAGCTATCAGCATAAAATTGTGAAATTTAGATCTGAGTTGTTCTTAAATTTGTAGTTTTTATTTATAGttt                                 >  1:1004217/1‑128 (MQ=255)
                                                                                                ccTCCATATTATCTATAGAGATAAT‑‑G‑‑‑‑ATATATATATATATATATATATAT‑‑ATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTta                                <  2:2469883/128‑1 (MQ=255)
                                                                                                 cTCCATATTACCTATAGAGTTAAT‑‑GATATATATATATATATATATATATATAT‑‑ATATTCAAGAGATAAGAATAAAATTGTGATATATATATCTGATTTTGTCTAAAATTATTAGTATTtatatatatt                                   >  2:1315490/1‑126 (MQ=255)
                                                                                                 cTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATAT‑‑ATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTtat                               <  1:82684/128‑1 (MQ=255)
                                                                                                 atacatattttatataGAGTTAAT‑‑T‑‑‑‑ATATATATATATATATATATATAT‑‑ATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTtat                               <  1:2406282/116‑1 (MQ=255)
                                                                                                     atatTACCTATAGAGTTAAT‑‑GAT‑‑ATATATATATATATATATATATAT‑‑ATATGCAAGCGATCAGCATAAAATGGTGAAATATAGCTCTGAGTTGGTCTTAAATGTGTAGTTTTTATTTATATTTtatat                             >  1:1344298/1‑127 (MQ=255)
                                                                                                        ttACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATAT‑‑ATATGCAAGCGATCAGCATAAAATTGTGATATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTta                        >  2:839416/1‑128 (MQ=255)
                                                                                                        ttACATATATAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATAT‑‑ATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTta                        <  2:1204087/128‑1 (MQ=255)
                                                                                                         ttgcTATAGAGTTAAT‑‑T‑‑‑‑ATATATATATATATATATATATAT‑‑ATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTtaa                       <  2:790074/125‑1 (MQ=255)
                                                                                                          aCCTATAGAGTTAAT‑‑GAT‑‑ATATATATATATATATATATATAT‑‑ATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTta                        <  1:1068123/128‑1 (MQ=255)
                                                                                                           ccTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATAT‑‑ATATGCTAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTGTTATATTTTTTGTTTTTTTTTATAGTTTATAAAGTtaata                     >  2:809089/1‑128 (MQ=255)
                                                                                                            cTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATAT‑‑ATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTtaataa                    <  1:2444675/128‑1 (MQ=255)
                                                                                                             tataGATTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATAT‑‑ATATGTAAGCGTTCAGCATAATATGGTGAAATTTATATCTGAGTTGGTTTTAAATTTGTAGTTTTTATTTTTTGTTTATAAAGTTaataat                   <  1:1847206/128‑1 (MQ=255)
                                                                                                              ataGAGTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATAT‑‑ATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTATTTTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTa                >  2:1042416/1‑128 (MQ=255)
                                                                                                                 gagTTAAT‑‑GAT‑‑ATATATATATATATATATATATAT‑‑ATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAAttt                 <  1:353894/128‑1 (MQ=255)
                                                                                                                 gagTTAAT‑‑GAT‑‑ATATATATATATATATATATATAT‑‑ATATGCAAGCGATCAGAATAAAATTGTGAAATTTATATCTGAGTTGGTATTAAATTTGTATTTTTTATTTATAGTTTATAAATTTAATAAttt                 >  2:1443227/1‑128 (MQ=255)
                                                                                                                 gagTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATAT‑‑ATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTTTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAg               >  1:1886395/1‑128 (MQ=255)
                                                                                                                 gagTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATAT‑‑ATATGCAAGCGATCAGAATAAAATTGTGATATATAGATATGATTTTTTCTAAAATTTGTAGTTTTTATATATAGTATATAAAGTTAATAATTTat               >  1:549107/1‑127 (MQ=255)
                                                                                                                  agTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATAT‑‑ATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGa              <  2:1472042/128‑1 (MQ=255)
                                                                                                                   gTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATAT‑‑ATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTGTTAAATTTTTAGTTTTTATTTATATTTTATAATGTTAATAATTTAGAt             >  2:449736/1‑128 (MQ=255)
                                                                                                                    atAAT‑‑G‑‑‑‑ATATATATATATATATATATATAT‑‑ATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAtt            <  1:693667/127‑1 (MQ=255)
                                                                                                                     ttaT‑‑G‑‑‑‑ATATATATATATATATATATATAT‑‑ATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGAGCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATGATTTAGAttt           <  2:2099100/126‑1 (MQ=255)
                                                                                                                      aaT‑‑G‑‑‑‑ATATATATATATATATATATATAT‑‑ATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAtttt          <  1:514504/128‑1 (MQ=255)
                                                                                                                      aaT‑‑G‑‑‑‑ATATATATATATATATATATATAT‑‑ATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAtttt          <  1:977404/128‑1 (MQ=255)
                                                                                                                       gttaatgatatatatatatatatatatatatat‑‑atatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAg               <  2:378460/119‑1 (MQ=255)
                                                                                                                          tgatatatatatatatatatatatatatat‑‑atatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAtt            <  2:2270301/122‑1 (MQ=255)
                                                                                                                           tatttatatatatatatatatatatatat‑‑atatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAttt           <  2:114070/123‑1 (MQ=255)
                                                                                                                               atgatatatatatatatatatatat‑‑atatTCAAGCGATCAGCATAAAATGGTTAATTTTAGATCTGAGTGGGTCTTATATTTGTAGTTTTTATTTTTAGTTTATAAATTTAATTATTTTTATTTTTaa       >  2:1181137/4‑128 (MQ=255)
                                                                                                                                    atatatatatatatatatat‑‑atatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATAttt  >  1:2048464/1‑128 (MQ=255)
                                                                                                                                    |                                                                                                                                 
TTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATAT‑‑ATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTT  >  CP016816/437759‑438012

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.