New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 437885 =695 (0.610)49 (0.050) 28/204 21.6 8.4% intergenic (‑189/+233) JCVSYN2_01985/JCVSYN2_01990 glycosyl transferase/ABC transporter permease
?CP016816 = 437880 510 (0.560)intergenic (‑184/+238) JCVSYN2_01985/JCVSYN2_01990 glycosyl transferase/ABC transporter permease
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 708 total aligned reads displayed.

TGAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAA  >  CP016816/437753‑438007
                                                                                                                                   |                                                                                                                                     
 gAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑a                                                                                                                                  >  2:239843/1‑128 (MQ=255)
  aaaCTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑at                                                                                                                                 >  2:817213/1‑128 (MQ=255)
   aaCTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTGTAGAGTTAAT‑‑‑‑G‑‑‑‑ata                                                                                                                                >  1:238857/1‑128 (MQ=255)
      ttATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGAAAAGCAAAAACATCCATATTACATATATAGTTAAT‑‑‑‑G‑‑‑‑atatat                                                                                                                             >  1:987877/1‑128 (MQ=255)
      ttATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAAGGAAGCACAGCAAAAACCTCCATATTCCCTATAGAGATAAT‑‑‑‑G‑‑‑‑atatat                                                                                                                             >  1:2056537/1‑128 (MQ=255)
       tATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑atatata                                                                                                                            >  2:89690/1‑128 (MQ=255)
           actacaaaaatAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑atatatatata                                                                                                                        >  2:2010363/11‑128 (MQ=255)
                aGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑atatatatatatatat                                                                                                                   >  2:663239/1‑128 (MQ=255)
                   tGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTATGAAATGAATCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑t‑‑‑‑atatatatatatatatata                                                                                                                <  2:2059064/128‑1 (MQ=255)
                   tGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑atatatatatatatatata                                                                                                                >  1:2263807/1‑128 (MQ=255)
                    gtttgTTTAATTTTTAATAAATATTATAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAAGAAAACCAAAAACCTCAATATTACCTATAGAGTTAAA‑‑‑‑G‑‑‑‑atatatatatatatatatat                                                                                                               <  2:1681802/124‑1 (MQ=255)
                    gTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑atatatatatatatatatat                                                                                                               >  1:378460/1‑128 (MQ=255)
                      aaGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑atatatatatatatatatatat                                                                                                             >  1:629058/1‑128 (MQ=255)
                       aGTTTAATTTTTTATAAATAATTTACATTAAAATTTATTTTTTATAATATATATTTTAGGATAAGAAGACACTCTAAAACCTCCATATTTCCTATAGAGTTATT‑‑‑‑G‑‑‑‑atatatatatatatatatatata                                                                                                            <  2:1595881/128‑1 (MQ=255)
                        gTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑atatatatatatatatatatatat                                                                                                           >  2:1927510/1‑128 (MQ=255)
                         tttCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑atatatatatatatatatatatata                                                                                                          >  1:294712/1‑128 (MQ=255)
                         tttCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACATCCATATAACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑atatatatatatatttatatatata                                                                                                          >  1:866111/1‑128 (MQ=255)
                          ttaaTTTTTAATAAATTTTAGTATTATAAATTGTATTTTTATAATAAATATTTTAGTAAATTAATCAAAGAAAAAACATCCATATTAACTATAGAGTTAAT‑‑‑‑G‑‑‑‑atatatatatatatatatatatatat                                                                                                         <  2:1459147/125‑1 (MQ=255)
                           tCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑atatatatatatatatatatatatata                                                                                                        >  1:2017108/1‑128 (MQ=255)
                            aaTTTTTAATATATATAAGATATAAAAATTGTATTTTTAAAAAAAATATTTTATGAAATGAAGAAAATAAAAAACATCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑atatatatatatatatatatatatatat                                                                                                       <  2:291421/127‑1 (MQ=255)
                             aTTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑atatatatataaatatatatatatatata                                                                                                      >  1:544321/1‑127 (MQ=255)
                              tttttAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTACATATTACATATAGAGTTAAT‑‑‑‑G‑‑‑‑atatatatatatatatatatatatatataa                                                                                                     >  2:495175/1‑126 (MQ=255)
                               ttttAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑atatatatatatatatatatatatgcaagcg                                                                                                    <  1:1927671/128‑8 (MQ=255)
                                tttAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑atatatatatatatatatatatatatttatgc                                                                                                   >  2:408531/1‑122 (MQ=255)
                                  taataaATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCATAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑TCTAGc                                                                                               >  1:158871/1‑128 (MQ=255)
                                  taataaATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑atatatatatatatatatatatatattcaagcga                                                                                                 >  2:702562/1‑120 (MQ=255)
                                  taataaATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCaatc                                                                                               >  2:1980760/1‑126 (MQ=255)
                                   aataaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑atatatatatatatatatatata                                                                                                            >  2:524510/1‑116 (MQ=255)
                                   aataaataTATTATATAAAAATTTTTTATTTAAAATAAAAATTTTATTAAATTAATCAAAGCAAAAAAATCAATATTAACTATAGAGATAAT‑‑‑‑T‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCg                                                                                              <  1:83592/128‑1 (MQ=255)
                                     taaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GAAAGCGag                                                                                            >  2:1037370/1‑127 (MQ=255)
                                     taaataTTAGAAAAAAAAATTTTATATTTTAAATATATATTTTATTAAATTAACCAAATAAAAAAACTCAATATTAACTATAGAGTTAAT‑‑‑‑T‑‑‑‑atatatatatatatatatatatatatatatgcaagcg                                                                                              <  1:1816641/128‑10 (MQ=255)
                                          atTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATTA‑‑GAAAGAGATCAgga                                                                                       >  2:1955688/1‑126 (MQ=255)
                                          atTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATc                                                                                           >  2:1907993/1‑124 (MQ=255)
                                           ttATAAATAAAAATTTTATTTTTAAAATAAATATTTTAGTAAATGAAGAAAAGCAAAAACATCCATATTACATATAGAGTTAAT‑‑‑‑GAT‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGc                                                                                        <  2:2315383/128‑1 (MQ=255)
                                           ttAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATaa                                                                                    >  2:1867471/1‑128 (MQ=255)
                                            tAGAAATAAAAATTGTATTTTTATAATAAATATTTTAGTAAATGAAGCAAAGAAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATa                                                                                     <  1:2319217/128‑1 (MQ=255)
                                             ataaaTAAAAATTTTATTTTTAAAATAAATATTTTATTAAATTTATAAAATAAAAAATCTACATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATaa                                                                                    <  2:842029/126‑1 (MQ=255)
                                             aGAAATAAAAATTTTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAAACTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATaa                                                                                    <  1:146804/128‑1 (MQ=255)
                                              gAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑GAT‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCacaata                                                                                     >  1:1547227/1‑123 (MQ=255)
                                              gAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATAAGCATaaa                                                                                   >  2:2228803/1‑128 (MQ=255)
                                                aaTAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑TAAATCGATCTGAAAAAAAt                                                                                 >  2:1131221/1‑128 (MQ=255)
                                                 aTAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑GATATATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATaa                                                                                    <  2:363494/128‑1 (MQ=255)
                                                   aaaaaTTTTATTTTTAAAATAAATATTTTAGTAAATTAAGAAAAGAAAAAACCTCAATATTACCTATATAGTTAATTATAT‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATaaaa                                                                                  <  2:1170618/128‑1 (MQ=255)
                                                   aaaaaTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGAAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGaaa                                                                          <  2:2163110/128‑1 (MQ=255)
                                                        ttGAATTTTTAAAATAAATATTTTAGGAAATGAAGCTAAGCAAAAATCTCAATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAAttt                                                                       <  1:247499/128‑1 (MQ=255)
                                                          ttATTTTTTTAATAAATATTTTTTGTAATGTTTCAAATCTAAAAAATCTATATTTACTATAGAGTTATTTA‑‑T‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAAt                                                                         <  2:966765/127‑1 (MQ=255)
                                                            aTTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCt                                                                 >  1:2157017/1‑128 (MQ=255)
                                                            aTTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTCAAT‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATAT‑‑GCAATCGATCAGCATAAAATGGTGAAATTTAGAt                                                                   >  2:182140/1‑128 (MQ=255)
                                                             tttttAAAATAAATATTTTAGGAATTGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑GAT‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCTAAAAATGGTGaattata                                                                      >  1:742612/1‑123 (MQ=255)
                                                               tttAAAATAAATATTTTAGGAAATGAATCAAAGCAAAAACCTCAATATTAAATATAGAGTTAAT‑‑‑‑‑‑‑‑‑‑‑‑TATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAg                                                              <  2:142750/128‑1 (MQ=255)
                                                               tttAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GAAATCGATAAAAATAAAATATAGAAATTAATATc                                                                  >  2:2089627/1‑128 (MQ=255)
                                                                 tAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑GAT‑‑ATATATATATATATATATATATATATAT‑‑GAAAGCTAACAAAATAAAATATTAAAATTTATATc                                                                  >  1:1274075/1‑128 (MQ=255)
                                                                 tAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCATCATAAAATGGTGAAATTTAGATCTg                                                                >  1:1962419/1‑128 (MQ=255)
                                                                 tAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAg                                                              <  1:92756/128‑1 (MQ=255)
                                                                  aaaaTAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑TAAATCGATCAGCATAAAATTGTGATATTTATATCTGa                                                               >  1:1735163/1‑128 (MQ=255)
                                                                  aaaaTAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GAAAGCGATCAGAATAAAATGGTGAAATATAGATCTGa                                                               >  2:1493763/1‑128 (MQ=255)
                                                                   aaataaatATTTTATCAAATGAAGCAAAGCAAAAACTTACATATTAAGTATAGAGATAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGAGCAGCATAAAATGGTGAAATTTAGATCTGAg                                                              <  2:926961/128‑1 (MQ=255)
                                                                    aataaataTTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCATCATAAAATGGTGAAATTTAGATCTGAGt                                                             >  1:351349/1‑128 (MQ=255)
                                                                       aaataTTTTAGTAAATGAATCAAAGCAAAAAAATCAATATTACATATAGAGTTAAT‑‑‑‑GATATATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAg                                                              <  2:1338356/128‑1 (MQ=255)
                                                                          tatTTTAGGAAATGAAGCTAAGCAAAAACCTCTATATAACCTATATAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCt                                                       <  1:787160/128‑1 (MQ=255)
                                                                            ttttAGGAAATGAAGCAAAGCAAAATCCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATAT‑‑GCAAGCGAGCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTaaa                                                   >  1:961822/1‑128 (MQ=255)
                                                                             tttATGAAATGAAGCAAAGCTAAAAACTCAATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAAttt                                                <  1:486321/128‑1 (MQ=255)
                                                                             tttATGAAATGAAGAAAATCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTaa                                                    <  2:79544/128‑1 (MQ=255)
                                                                             tttAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCTAGCGATCAGATTATAATTGTGAAATTTAGATCTGAGTTGTTCTTaa                                                    >  1:674377/1‑128 (MQ=255)
                                                                              ttAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTTAGTTGGTCTTTAAtt                                                 >  1:2438396/1‑128 (MQ=255)
                                                                               tattaaaTGAATCAAATAAAAAAACTCCATATTATCTATAGAGTTATT‑‑‑‑GATATATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCtt                                                      <  1:1863792/124‑1 (MQ=255)
                                                                                 ggAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTATATCTGAGTTGGTCTTAAAttt                                                >  1:1516672/1‑128 (MQ=255)
                                                                                  gAAATGAATCAAAGCAAAAACCTCCATATTACCTATAGAGATAAT‑‑‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGt                                           <  2:571112/128‑1 (MQ=255)
                                                                                    aaTGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑GAT‑‑ATATATATATATATATATATATATATAT‑‑GCAAGAGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTTGTATTAAATTTg                                               >  1:1791895/1‑128 (MQ=255)
                                                                                     aataagcaaatatAAAAACTCAATATTACCTATATAGTTAAT‑‑‑‑GAT‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGt                                              <  1:1341219/125‑1 (MQ=255)
                                                                                        aagcaaagcaAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATAT‑‑GCAAGCTATCAGCATAATATTGTGATATTTATATCTGAGTGGGTATTATATTTGTAGttttt                                       >  1:2109886/1‑128 (MQ=255)
                                                                                          gcaaagcaaaAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGttttt                                       >  1:1352245/1‑128 (MQ=255)
                                                                                            aaagcaaaAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCACGCGCTCAGGATAAAATGGTGAAATTGAGATCTGAGTTGGTCTTAAATTAGTATTGtttat                                     >  1:1712391/1‑128 (MQ=255)
                                                                                            aaagaaaaAACATAAATATTAAATATATAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATAT‑‑‑T‑‑‑CAAGCGATCAGCTTAAAATTGTGAAATTTATATCTGAGTTGGTCTTAAATTTGTAGTTTttatttat                                 <  2:171774/128‑1 (MQ=255)
                                                                                             aagcaaaAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATTGTGAAATATAGATCTGAGTTGGTCTAAAATTTGTATTTtttattta                                  >  1:594298/1‑128 (MQ=255)
                                                                                               gcaaaAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTtttattta                                  >  1:139755/1‑128 (MQ=255)
                                                                                                caaaAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTttatttat                                 >  2:2460491/1‑128 (MQ=255)
                                                                                                caaaAACATAAATATTACCTATAGAGTTAAT‑‑‑‑GAT‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTtttattt                                   <  1:1145822/128‑1 (MQ=255)
                                                                                                   taaaatcaatatTATATATAGATATATA‑‑‑‑G‑‑‑‑ATATATATATATCTATATATATATATAT‑‑GCAAGAGAGCAGCTTAAAATGTTTAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGt                              <  1:1995703/120‑1 (MQ=255)
                                                                                                   aaaaCTCCATATAACCTATAGAGTTAAT‑‑‑‑GAT‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTtata                                <  1:163774/128‑1 (MQ=255)
                                                                                                     aCCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCTATCAGCATAAAATTGTGAAATTTAGATCTGAGTTGTTCTTAAATTTGTAGTTTTTATTTATAGttt                            >  1:1004217/1‑128 (MQ=255)
                                                                                                      tagagatatTAACTATAGAGTTTAT‑‑‑‑T‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGAGCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGGCTTAAATTTGTAGTTTTTATTTATAGTTta                           <  2:1289788/123‑1 (MQ=255)
                                                                                                      ccTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTta                           <  1:70609/128‑1 (MQ=255)
                                                                                                      ccTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATAAATATATATATAT‑‑GAAAGAGATCAGCATAATATGGTGATATTTATATAACAGTTTGTCTTTATTTTGTAGTTTTTATTTATATTTta                           >  1:2195115/1‑128 (MQ=255)
                                                                                                      acacattatTAAATATAGAGTTAAT‑‑‑‑G‑‑‑‑ATTTATAAATATATATATATATATTTAT‑‑GCAAGCGAGCAGAATAAAATGGGGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTta                           <  2:441306/122‑1 (MQ=255)
                                                                                                       cTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTATATCTGAGTTGGTCTTATATTTGTAGTTTTTATATATAGTTtat                          >  1:508950/1‑128 (MQ=255)
                                                                                                       cTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATATGTAGTTTTTATTTATAGTTtat                          >  1:1669506/1‑128 (MQ=255)
                                                                                                        tctatatTACATATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATTTATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTtata                         <  1:1092210/125‑1 (MQ=255)
                                                                                                        tCCATATTACCTATAGAGTTAAT‑‑‑‑GAT‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATTGTGAAATTTAGATCTGTGTTGGTCTTAAATTTGTAGTTTTTATTTATTGTTta                           >  2:1198135/1‑128 (MQ=255)
                                                                                                         ccATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAg                      <  2:728399/128‑1 (MQ=255)
                                                                                                         ccATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATAT‑‑CAAAGCGATCAGCATAAAATATTTAAATAGATATCTAAGTTTGTCTTAAATTTTTATTTTTTATTTATAGTTTTTAAAg                      >  1:1182742/1‑128 (MQ=255)
                                                                                                          cATATTACCTATAGAGAAAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATAA‑‑GCAAGCTATCACAATAATATTGTAATTAATAGATCTGAGTATGTCTTATATTTTTAGTTTATATTTATAGATTATaaa                       >  1:1904265/1‑128 (MQ=255)
                                                                                                           atatTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATAAGAAAGCTATCAAAATAAAATTGTGATATTTATATCTGAGTTTGTCTTAAATTTATAGTTTTTATATATATTTTATaa                        >  2:1076477/1‑128 (MQ=255)
                                                                                                           atatTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GAAAGCGATCAGAATAAAATTTTGAAATTTATATCTGAGATGGTCTTATAGTGTGAGGTTTTATTTATAGttttgaata                      >  1:1022031/1‑122 (MQ=255)
                                                                                                              ttACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑TAAAGCGATCAGCATAAAATGGTGATATTTTTATCTGATTTGGTCTTATATTTGTATTTTTTATTTATATTTTATATAGTta                   >  1:105625/1‑128 (MQ=255)
                                                                                                               tACCTATAGAGTTAAT‑‑‑‑GAT‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTTGTCTTAAATTTTTAGTTTTTATTTATAGTTTATAAAttt                    >  2:1523460/1‑128 (MQ=255)
                                                                                                               tACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCTATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTATAGTTTTTATTTATAGTTTATAAAGTtaa                  >  2:2116356/1‑128 (MQ=255)
                                                                                                                aCCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATAA‑‑GCTAGCGATCAGAATAAAATTGAGATATATAGATCTGAGTTTATCTTAATTTTTTATTTTTTTTTTATAGTTTATATAGTtaat                 >  2:1376826/1‑128 (MQ=255)
                                                                                                                 acTATAGAGATAAT‑‑‑‑GAT‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTtaa                  <  2:1744358/127‑1 (MQ=255)
                                                                                                                             aT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCTAACATCATAAAATGGTTAAATTTAGATCTGAGTTTGTCTTAAATTTCTATTTTATATTTATAGTATATAAATATAATAATTTACAttttt    >  2:1659602/1‑128 (MQ=255)
                                                                                                                                   |                                                                                                                                     
TGAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAA  >  CP016816/437753‑438007

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.