BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP016816	= 437880	1416 (0.410)	962 (0.220) +ATAT	113/188	12.8	34.3%	intergenic (‑184/+238)	JCVSYN2_01985/JCVSYN2_01990	glycosyl transferase/ABC transporter permease
*	?	CP016816	437881 =	1984 (0.450)	962 (0.220) +ATAT	113/188	12.8	34.3%	intergenic (‑185/+237)	JCVSYN2_01985/JCVSYN2_01990	glycosyl transferase/ABC transporter permease
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 2971 total aligned reads displayed.

TGAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAA  >  CP016816/437753‑438007

tGAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATg                                                                                                                                       >  1:4469671/1‑128 (MQ=255)

 gAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑a                                                                                                                                >  1:2255029/1‑128 (MQ=255)

  aaaCTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑at                                                                                                                               >  2:7125770/1‑128 (MQ=255)

    aCTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑atat                                                                                                                             >  2:3045970/1‑128 (MQ=255)

        aTTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑atatatat                                                                                                                         >  1:43068/1‑128 (MQ=255)

         tttttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGAATTTTAAAAATAAAAATTTTAGGAAATGAAGCAAAGCAAAAACCTCAATATTAACTATAGCGGTAATG‑‑‑‑‑‑atatatata                                                                                                                        >  2:1653880/1‑128 (MQ=255)

          ttttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑atatatatat                                                                                                                       >  1:55576/1‑128 (MQ=255)

             tacaaaaatAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑atatatatatata                                                                                                                    >  1:1572031/9‑128 (MQ=255)

                 gttttatttttAATTTTTAATATATATTATAAATAAAAATTTTTTTTTTAAAATAAATATTTTATTATATTAATATAATAAAAAAACTAAATATTAAATATAGATTTTATT‑‑‑‑‑‑atatatatatatatata                                                                                                                <  2:9494314/120‑1 (MQ=255)

                 gTTTTAATTTTCATTTTTAATATATATTATAAATAAAAATTTTATTTTTAAAATAAATATTTTATGATATGAAGCAAAGAAAAAACCTCAATATTACCTATAGAGTTAATG‑‑‑‑‑‑atatatatatatatata                                                                                                                <  2:3424244/128‑1 (MQ=255)

                 gTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACGTATAGAGTTAATG‑‑‑‑‑‑atatatatatatatata                                                                                                                >  2:5114507/1‑128 (MQ=255)

                   tttAATTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTATGAAATGAAGCAAAGAAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑atatatatatatatatata                                                                                                              <  1:1147928/126‑1 (MQ=255)

                   tGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAATCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑atatatatatatatatata                                                                                                              <  1:7824953/128‑1 (MQ=255)

                   tGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑atatatatatatatatata                                                                                                              >  1:526001/1‑128 (MQ=255)

                    ttatttttAATTTTTAATAAATTTTAGATATAAATATTGTATTTTTAAAATAAATATTTTTGTAAATTAATAAAAGCAAAAAACTACATATTAAATATATAGTTAATT‑‑‑‑‑‑atatatatatatatatatat                                                                                                             <  2:374755/123‑1 (MQ=255)

                    gTAAGTTTCATTTTTAATAAATATTAGAAATATAAATTGTATTTTTAAAATAAATATTTTAGGAAATTTATCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑atatatatatatatatatat                                                                                                             <  2:3879912/128‑1 (MQ=255)

                    gTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAATCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑atatatatatatatatatat                                                                                                             >  1:3624741/1‑128 (MQ=255)

                     tAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑atatatatatatatatatata                                                                                                            >  2:7522223/1‑128 (MQ=255)

                      aaGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑atatatatatatatatatatat                                                                                                           >  2:2051995/1‑128 (MQ=255)

                       tttttAATTTTTAATAAATAATATATATATAAATTTTATTTTTAAAATAAATATTTTATATAATTACAAAAAAAAAAAAAATAAATATTATATATAGAGATAAAG‑‑‑‑‑‑atatatatatatatatatatata                                                                                                          <  2:4913989/126‑1 (MQ=255)

                          ttaaTTTTTAATAAATATATTAAATAAAAATTTTATTTTTAAAATAAATATTTTATTAAAATAATAAAATAAAAAAACTACATATTAAATATAGAGATAATT‑‑‑‑‑‑atatatatatatatatatatatatat                                                                                                       <  1:6939192/125‑1 (MQ=255)

                              tttttAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAATCAAAGCAAAAACCTCCATATTAACTATAGAGTTAATG‑‑‑‑‑‑atatatatatatatatatatatatgcaagc                                                                                                   <  2:4413222/128‑7 (MQ=255)

                               ttttAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑atatatatatatatatatatatataaaaaag                                                                                                  >  2:8369617/1‑122 (MQ=255)

                                  tgataaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGCAGCAAAGCAAAATCCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATATTCTAGc                                                                                               >  2:5280627/3‑128 (MQ=255)

                                  taataaATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTATTAAATGAAGAAAAGCAAAAACCTCCATATTACATATAGAGTTAATG‑‑‑‑‑‑atatatatatatatatatatatatgcaagcgatc                                                                                               <  1:2474628/128‑11 (MQ=255)

                                  taataaATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATATACAAGc                                                                                               >  1:1007221/1‑128 (MQ=255)

                                   aataaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑atatatatatatatatatatatatatgatagcgat                                                                                              >  1:8963064/1‑119 (MQ=255)

                                   aataaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑atatatatatatatatatatatataagcaagctat                                                                                              >  1:1384291/1‑118 (MQ=255)

                                   aataaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATATGctcgcg                                                                                              >  1:8043769/1‑123 (MQ=255)

                                    ataaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATATAGTTAATG‑‑‑‑‑‑atatatatatatatatatatatatataaaatatcta                                                                                             >  1:191262/1‑119 (MQ=255)

                                     taaataTTAGAAATAAAAATTGTATTTTTAAAATAAAAATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑atatatatatatatatatatatatatatatattcact                                                                                            >  2:7995821/1‑119 (MQ=255)

                                       aataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑atatatatatatatatatatata                                                                                                          >  2:7325689/1‑112 (MQ=255)

                                         tatTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAAACTCAATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATATTAAATCGATAAga                                                                                        >  1:2760866/1‑127 (MQ=255)

                                         tatTAGAAATAAAAATTGTATATTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATaa                                                                                    <  1:3774150/128‑1 (MQ=255)

                                          atTAGATATAAAAATTTTATTTTTAAAATATATATATTATTAAATTAATCAAACAAAAAACATCTATATAACCTATAGAGTTAAT‑‑‑‑‑‑‑‑TATATATATATATATATATATATATATGCAAGCGATCAGCATa                                                                                     <  1:9099558/128‑1 (MQ=255)

                                           ttAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATAATCAAGCTATCAGAAt                                                                                      >  1:5088518/1‑128 (MQ=255)

                                           ttAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAAACTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATATTCAAGctctctgaat                                                                                      >  2:6669212/1‑119 (MQ=255)

                                           ttAGAAATAAAAATTGTATTTTTAAAATAAATATATTAGTAAATGAATCAAAGCAAAAACCTCCATATTACCTATAGAGATAATG‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATaa                                                                                    <  1:176904/128‑1 (MQ=255)

                                             aGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATAAA‑‑CAATCGATCATAATaaaa                                                                                  >  2:6864743/1‑128 (MQ=255)

                                              gacaTAAAAATTGTATTTTTAAAATAAATATATTAGTAAATCAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGAGCAGCATAAAAt                                                                                 <  1:3382265/125‑1 (MQ=255)

                                              gAAATAAAAAATGTATATTTAAAATAAATATTTTAGTAAATTTATCAAATAAAAAACCTCAATATTAACTATAGAGTTAATT‑‑‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATaaa                                                                                   <  2:4573599/128‑1 (MQ=255)

                                                  tAAAAATTTTATTTTTAAAATAAATATTTTAGTAAATCAATCAAAGCAAAAACCTCAATATTACCTATAGAGTTAATG‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTg                                                                             <  2:1255158/128‑1 (MQ=255)

                                                  tAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGAATAAAAttg                                                                               >  1:413948/1‑126 (MQ=255)

                                                  tAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATAAATATATATATATATATATATATATTCAATGGAACATCATAAAATgg                                                                               >  1:5969524/1‑128 (MQ=255)

                                                      aaTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGAATAAATTGGTTaa                                                                           >  1:6146727/1‑128 (MQ=255)

                                                        ttGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAAACTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAAttt                                                                       <  1:6401686/128‑1 (MQ=255)

                                                          gTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATAAATATATA‑‑CAATAGATCAGCAAAAAATAATGAAAtattg                                                                     >  1:3078445/1‑124 (MQ=255)

                                                               tttAAAATAAATATTTTAGTATATGAATCAAAGAAAAAACCTACATATTACCTATAGAGTTAATGATATATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAAtt                                                                        <  1:543700/128‑1 (MQ=255)

                                                               tttAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATAACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATATACAAGACATCAGAATAAAATGGATAATTTTataac                                                                  >  1:6764523/1‑124 (MQ=255)

                                                                 tAAAATAAATATTTTAGGAAATGAATCAAAGCAAATACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGtt                                                            <  2:9134197/128‑1 (MQ=255)

                                                                 tAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGATATTTAGATCTg                                                                >  1:2896554/1‑128 (MQ=255)

                                                                   aaataaatATTTTATTATATTAATCAAAGAAAAAAACTACATATTAACTATAGAGTTAATGAT‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTg                                                                <  1:8555132/128‑1 (MQ=255)

                                                                   aaataaatATATTAGTAAAAGAACCAAATAAAAAAACTAAATATTAACTATAGAGTTAATT‑‑‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAg                                                              <  2:9321246/128‑1 (MQ=255)

                                                                    aataaataTTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGt                                                             <  1:3229455/128‑1 (MQ=255)

                                                                    aataaataTTTTAGGAAATGAAGCAAAGAAAAAAACTCTATATTAACTATAGAGTTAAT‑‑‑‑‑‑‑‑TATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTg                                                           <  1:4919792/128‑1 (MQ=255)

                                                                     ataaataTTTTAGGTAATTAAGAAAAGAAAAAAAATCAATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGtt                                                            <  1:8825649/128‑1 (MQ=255)

                                                                      taaaaaTTTTAGTAAAAGAAGCAAATAAAAAAACTCAATATTACCTATAGATTTAATT‑‑‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTg                                                           <  2:6146727/128‑1 (MQ=255)

                                                                         atatTTTATGAAATGAAGAAAATCAAAAACCTCCATATTAACTATAGAGTTAATG‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTaa                                                    <  1:9255557/128‑1 (MQ=255)

                                                                          tatTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATATGAAAGAGATCAGAATAAAATGGTTAAATTTATATCTCAGTTTGTCt                                                       >  2:5773047/1‑128 (MQ=255)

                                                                              ttATGAAATGAAGCACAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTg                                               <  2:3564321/128‑1 (MQ=255)

                                                                              ttAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTaaa                                                   >  1:8206437/1‑128 (MQ=255)

                                                                                 tgAAATGAAGCAAAGCAAAAACCTCCATATTTACTATAGAGTTTATG‑‑‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAAttt                                                <  1:7120137/127‑1 (MQ=255)

                                                                                    aaTGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTa                                             >  1:2620529/1‑128 (MQ=255)

                                                                                     aTGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTTAAATTTAGATATGAGTTGGTCTTATATTTGTAg                                            >  2:1091829/1‑128 (MQ=255)

                                                                                     aTGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATGAAAGAGAACAGCATAATATGAAGAAATTTAGATCTGAGTTAGTCTTAAATATGTAGtt                                          >  2:5609581/1‑128 (MQ=255)

                                                                                          gcaaagcaaaAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATGCTAGCGATCAGCATAAAATTGTGATATTTAGATCTTAGTTTGTATTAATTTTGTATTTtttat                                     >  2:6394291/1‑128 (MQ=255)

                                                                                           caaatcaaaAACATCCATATTAACTATAGAGATAATG‑‑‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTttta                                      <  1:5868975/128‑1 (MQ=255)

                                                                                           caaagcaaaAACCTCCATATTACCTATAGAGTTAATGAT‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGAATAATATGGTGAAATTTAGATCTGAGTTGGTATTAAATTTGTTGtttt                                        >  2:8716020/1‑128 (MQ=255)

                                                                                           caaagcaaaAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCCTCATAAAATTGTGAAATTTAGATCTGAGTTGGTCTTTAATTTGTTGTTttta                                      >  2:4064090/1‑128 (MQ=255)

                                                                                           caaagcaaaAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTtttatt                                    >  2:265273/1‑128 (MQ=255)

                                                                                           caaagaaaaAACCTCAATATTAACTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTttta                                      <  2:8194775/128‑1 (MQ=255)

                                                                                            aaagcaaaAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATATGCAAGCTATAAGCATAAAATGGTGAAATTTAGATCTGAGTTGTTCTTAAATTTGTAGTTtttat                                     >  1:7617634/1‑128 (MQ=255)

                                                                                            aaagcaaaAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTtttat                                     >  1:2097137/1‑128 (MQ=255)

                                                                                             aagaaaaAACATCAATATTATATATATAGTTAATT‑‑‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTtttatt                                    <  2:1457068/128‑1 (MQ=255)

                                                                                              agcaaaAACCTCCATATTAAATATAGAGATAATT‑‑‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTtttattt                                   <  2:7706789/128‑1 (MQ=255)

                                                                                                caaaAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCTATAAGCATAAAATGGTGATATTTAGATATTAGTTGGTCTTTAATTTGTATTTTTTATTTATAttt                             >  1:9566425/1‑128 (MQ=255)

                                                                                                caaaAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAAttt                                                >  1:6590905/1‑109 (MQ=255)

                                                                                                caaaAACCTCCATATTACATAAAGAGTTAATGAT‑‑‑‑ATATATATATATATATATATATATATATACAATCTATCATAATAAAATTGTTAAATTTAGATATTAGTTTTTATTAAATTtttattttttattt                                   >  2:2421589/1‑128 (MQ=255)

                                                                                                 aaaaaCCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTtata                                >  1:3518391/1‑128 (MQ=255)

                                                                                                  aaaaCCTCCATATAACCTATAGAGTTAATG‑‑‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTtata                         <  2:1858951/128‑1 (MQ=255)

                                                                                                   aaaCCTCCATAATAACTATAGATTTAATC‑‑‑‑‑‑ATATATATA‑‑‑A‑ATATATATATATATGCAAGCGATCAGCATAAAATTGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTtat                          <  2:4228185/128‑1 (MQ=255)

                                                                                                       cTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATA‑A‑GCAAGCGATCAGAATAAAATTGTAATATATAGATCTTAGTTGGTATAAAATTTGTATTTTTTATTTATATTTTATaa                        >  2:283177/1‑128 (MQ=255)

                                                                                                        tCCATATTACCTATAGAGTTAATGAT‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGAGAAATTTATATCTTAGTTTGTCTAAAATTTATAGTTTATATTTATATTTta                           >  1:838585/1‑128 (MQ=255)

                                                                                                        tCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGATATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATaaa                       >  1:8711559/1‑128 (MQ=255)

                                                                                                         ccATATTACCTATAGAGTTAATGAT‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATATGTATTTGTTATTTATAGTTtag                          >  1:7258299/1‑127 (MQ=255)

                                                                                                          cATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGAGAAATTTAGATCTGAGTTTGTCTTAAATTTGTAGTTTTTATTTATAGTTTATaaa                       >  2:6528307/1‑128 (MQ=255)

                                                                                                          cATATTACCTATAGAGTTAATG‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGt                     >  2:3278342/1‑128 (MQ=255)

                                                                                                             atTACCTATAGAGTTAATG‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGAATAAAATTGTGAAATTTATATCTGAGTTGGTCTTATATTTGTAGTTTTTATTTATAGTTTATAAAGTtaa                  >  1:465018/1‑128 (MQ=255)

                                                                                                             atTACCTATAGAGTTAATG‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTATATTTTTAGTTTTTATTTATATTATATAAAGTaaata                >  2:6994616/1‑128 (MQ=255)

                                                                                                             atTACCTATAGAGATAATG‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTtaa                  <  2:2255029/128‑1 (MQ=255)

                                                                                                              ttACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGATATTTAGATCTGAGTTAGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTta                   >  2:5458799/1‑128 (MQ=255)

                                                                                                               tACGTATAGAGTTAATG‑‑‑‑‑‑ATATATAGATATATCTATATATATATCTGCAAGCGATCAGCATAACATGGTGATAGTTAGATCTGAGGTGGGCTTAAATTTGGAGGTGTTATTTATAGTTTATAAAGTtaa                  <  2:8908680/128‑1 (MQ=255)

                                                                                                                 ccTATAGAGTTAATG‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTaataat              >  1:5699428/1‑128 (MQ=255)

                                                                                                                 aatatataTTTAAAG‑‑‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGGCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTtaata                <  2:4740925/126‑1 (MQ=255)

                                                                                                                      agttttAATG‑‑‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATTAAGTTAATAATTTa           <  2:8520403/124‑1 (MQ=255)

                                                                                                                      agagATAATT‑‑‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATTGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTa           <  2:5920915/128‑1 (MQ=255)

                                                                                                                      agagATAATG‑‑‑‑‑‑ATATATATATATATATCTATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTa           <  1:9451141/128‑1 (MQ=255)

                                                                                                                           ttaTG‑‑‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAttt      <  1:7399377/126‑1 (MQ=255)

                                                                                                                             aTG‑‑‑‑‑‑ATATATATATATATATATATATATTTATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAttttt    <  1:392595/128‑1 (MQ=255)

                                                                                                                             aTG‑‑‑‑‑‑ATAAATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAttttt    <  1:4770071/128‑1 (MQ=255)

TGAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAA  >  CP016816/437753‑438007

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.