New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 = 4378801416 (0.410)962 (0.220)
+ATAT		 113/188 12.8 34.3% intergenic (‑184/+238) JCVSYN2_01985/JCVSYN2_01990 glycosyl transferase/ABC transporter permease
?CP016816 437881 = 1984 (0.450)intergenic (‑185/+237) JCVSYN2_01985/JCVSYN2_01990 glycosyl transferase/ABC transporter permease
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 3015 total aligned reads displayed.

GAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑ATATAT‑‑ATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAAT  >  CP016816/437754‑438008
                                                                                                                                   |                                                                                                                                   
gAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTATAAAATAAATAATTTAGGAAATGAAGCAAAGCAAAAACCTCCATAATACCTATATAGTTAAT‑‑G‑‑a                                                                                                                                     >  2:4099221/1‑128 (MQ=255)
 aaaCTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTATGAAATGAAGCAAAGCAAAATCATCCATATTACCTATAGAGTTATT‑‑G‑‑ag                                                                                                                                    >  2:8534099/1‑127 (MQ=255)
 aaaCTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCAATATTACCTATAGAGTTAAT‑‑G‑‑at                                                                                                                                    >  1:6957041/1‑128 (MQ=255)
     ttATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑atatat                                                                                                                                >  2:3604969/1‑128 (MQ=255)
        tttttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCTAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑atatat‑‑ata                                                                                                                           >  2:6534039/1‑128 (MQ=255)
        tttttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑atatat‑‑ata                                                                                                                           >  1:4519064/1‑128 (MQ=255)
        tttttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑atatat‑‑ata                                                                                                                           >  1:5734628/1‑128 (MQ=255)
            tacaaaaatAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑atatat‑‑atatata                                                                                                                       >  1:1572031/9‑128 (MQ=255)
            tGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑atatat‑‑atatata                                                                                                                       <  2:5498012/128‑1 (MQ=255)
              tatttGTAATTTTCATTTTTAATAAATATTATAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAATCAAAAACCTCCATATAACCTATAGAGTTAAT‑‑G‑‑atatat‑‑atatatata                                                                                                                     <  2:1292485/125‑1 (MQ=255)
                gttttatttttAATTTTTAATATATATTATAAATAAAAATTTTTTTTTTAAAATAAATATTTTATTATATTAATATAATAAAAAAACTAAATATTAAATATAGATTTTAT‑‑T‑‑atatat‑‑atatatatata                                                                                                                   <  2:9494314/120‑1 (MQ=255)
                 ttGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTTAT‑‑G‑‑atatat‑‑atatatatatat                                                                                                                  <  1:5587027/128‑1 (MQ=255)
                    tAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑atatat‑‑atatatatatatata                                                                                                               >  2:7522223/1‑128 (MQ=255)
                     tattttAATTTTTAATAAATATTATAAATATAAATTTTA‑TTTTAAAATAAATATTTTATTAAATTAAGCAAATAAAAAACCTCTATATAAACTATAGAGATAAA‑‑t‑‑atatat‑‑atatatatatatatata                                                                                                             <  2:4776778/125‑1 (MQ=255)
                     aaGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTATGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑atatat‑‑gtatatatatatatat                                                                                                              <  1:619669/128‑1 (MQ=255)
                      aGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTATGAAATGAATCAAAGCAAAAACCTCCATATTACATATAGAGTTAAT‑‑G‑‑atatat‑‑atatatatatatatata                                                                                                             <  1:2102288/128‑1 (MQ=255)
                      aGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑atatat‑‑atatatatatatatata                                                                                                             >  1:589138/1‑128 (MQ=255)
                      aGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCAATATTACCTATAGAGTTAAT‑‑G‑‑atatat‑‑atatatatatatatata                                                                                                             <  2:7129223/128‑1 (MQ=255)
                      aGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATATTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑atatat‑‑atatatatatatatata                                                                                                             <  1:8236409/128‑1 (MQ=255)
                      aGTTTAATTTTTATTATATATTAGAAATATAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAATCAAAGCAAAAACCTCCATATTAACTATAGAGTTAAT‑‑G‑‑atatat‑‑atatatatatatatata                                                                                                             <  2:6995317/128‑1 (MQ=255)
                       gTTTCTTTTTTAATAAATATTAGATATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑atatat‑‑atatatatatatatatat                                                                                                            <  1:294484/128‑1 (MQ=255)
                        tttCATTTTTAATAAATATTATAAATAAAAAATTTATTATTAAAATAAATATTTTATTAAATGAAACAAAGAAAAAAACTCCATATAAACACTAGAGTTAAT‑‑G‑‑atatat‑‑atatatatatatatatata                                                                                                           <  1:4951964/128‑1 (MQ=255)
                            aTTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTAAAT‑‑G‑‑atatat‑‑aaatatatatatatatatatata                                                                                                       >  2:6173451/1‑127 (MQ=255)
                              ttttATTAAAAATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTTAATTAAGAAAAGAAAAAAACTCAATATTAAATATAGAGTTAAT‑‑G‑‑atatat‑‑atatatatatatatatatatgcaag                                                                                                     <  1:5096445/128‑6 (MQ=255)
                              ttttAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑atatat‑‑atatatatatatatatataaaaaag                                                                                                     >  2:8369617/1‑122 (MQ=255)
                                 taataaATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑ATATAT‑‑ATATATATATATATATATATAT‑‑ACAAGc                                                                                                >  1:1007221/1‑128 (MQ=255)
                                  aatatataTTAGATATAAAAATATTATATTTAAAATAAATATTTTATTAAATGAATCAAATCAAAAAACTCAATATTACATATAGAGTTAAA‑‑G‑‑atatat‑‑atatatatatatatatatatatatgcaag                                                                                                 <  1:3992646/128‑8 (MQ=255)
                                  aataaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑atatat‑‑atatatatatatatatataagcaagctat                                                                                                 >  1:1384291/1‑118 (MQ=255)
                                  aataaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATAT‑‑ATATATATATATATATATATAT‑‑GCAAGCGAt                                                                                             <  1:417758/128‑1 (MQ=255)
                                    taaataTTATAAATAAAAATTTTATTTTTAAAATATATATTTTATTAAATTAATCAAATCAAAAACATCCAAATTAACTATATAGTTAAT‑‑G‑‑ATATAT‑‑ATATATATATATATATATATAT‑‑GCAAGCGAt                                                                                             <  1:2261800/128‑1 (MQ=255)
                                    taaataTTAGAAATAAAAATTGTATTTTTAAAATAAAAATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑atatat‑‑atatatatatatatatatatatatattcact                                                                                               >  2:7995821/1‑119 (MQ=255)
                                      aataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑ATATAT‑‑ATATATATATATATATATATAT‑‑TCAAGCGATCa                                                                                           >  1:7648849/1‑128 (MQ=255)
                                      aataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑ATATAT‑‑ATATATATATATATATATATAT‑‑GCAAGCGATCa                                                                                           >  1:8595236/1‑128 (MQ=255)
                                       atatTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑ATATAT‑‑ATATATATATATATATATATAA‑‑TCAAgatataag                                                                                          >  2:1907934/1‑121 (MQ=255)
                                       atatTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATAT‑‑ATATATATATATATATATATAT‑‑GCAAGCGATCAgaa                                                                                        >  1:4786997/1‑126 (MQ=255)
                                        tatTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑ATATAT‑‑ATATATATATATATATATATAT‑‑GCAAGCTATCAGc                                                                                         >  1:1925694/1‑128 (MQ=255)
                                        tatTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑ATATAT‑‑ATATATATATATATATATATAA‑‑TCAAGATATCatc                                                                                         >  1:91239/1‑126 (MQ=255)
                                         tttatatatatAAATTTTATTTATTAAATAAATATTTTATTAAATATATAAAATCAAAAACCTCAATATTACCTATAGAGTTAAT‑‑T‑‑ATATAT‑‑ATATATATATATATATATATAT‑‑GCAAGCGATCAGCa                                                                                        <  2:3313951/121‑1 (MQ=255)
                                          ttAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAAACTCCATATTACCTATAGAGTTAAT‑‑G‑‑ATATAT‑‑ATATATATATATATATATATAT‑‑TCAAGctctctgaat                                                                                       >  2:6669212/1‑119 (MQ=255)
                                            atataTAAAAATTTTATTTTTAAAATAAATATTTTATGAAATGAATCAAAGCAAAAAACTCCATATTACCTATAGAGTTAAT‑‑G‑‑ATATAT‑‑ATATATATATATATATATATAT‑‑GCAAGCGATCAGCATaa                                                                                     <  2:5164814/124‑1 (MQ=255)
                                            aGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑ATATAT‑‑ATATATATATATATATATAAA‑‑‑‑CAATCGATCATAATaaaa                                                                                   >  2:6864743/1‑128 (MQ=255)
                                            aGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑AT‑‑ATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATg                                                                                 >  2:2273517/1‑128 (MQ=255)
                                              aaaTAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTAACTATAGAGTTAAT‑‑G‑‑ATATAT‑‑ATATATATATATATATATATA‑‑‑‑CAAGCTATCACAATAAAATg                                                                                 >  1:1154090/1‑128 (MQ=255)
                                               tattaaaaTTGTTTTTTTAAAATATATATTTTAGGAAAAGAATCAAAGCAAAAACATCCATATTACCTATAGAGTTAAT‑‑G‑‑ATATAT‑‑ATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAAt                                                                                  <  1:1775826/124‑1 (MQ=255)
                                                 tAAAAATTGTATTTTTAAAATAAATATTTTATTAAATGTATCCAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑AT‑‑ATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGaa                                                                            <  1:5450114/128‑1 (MQ=255)
                                                 tAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑ATATAT‑‑ATATATATATATATATATATAT‑‑AAAAGAGATCAGAaaaaaaatg                                                                                >  1:7853099/1‑125 (MQ=255)
                                                  aaaaaTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑ATATAT‑‑ATATATATATATATATATAT‑T‑‑‑CTAGAGATCAGCATAAAATGGTGa                                                                             >  1:8975936/1‑128 (MQ=255)
                                                   aaaaTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATAT‑‑ATATATATATATATATATATAT‑‑GCAAGCGCTCAGCATAAAATGGTGaa                                                                            >  2:5799975/1‑128 (MQ=255)
                                                      aTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑ATATAT‑‑ATATATATATATATATAT‑‑‑T‑‑‑CAAGCGATCAGCATAAAATGGTGAAATTTa                                                                       >  1:3420278/1‑128 (MQ=255)
                                                        tGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATAT‑‑ATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATTGTGAAATTTa                                                                       >  1:2782214/1‑128 (MQ=255)
                                                         gTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑ATATAT‑‑ATATATATATATATATATATAT‑‑TCAAGCGATCAGCATAAAATGTTGaattat                                                                        >  2:8734428/1‑124 (MQ=255)
                                                          tATTTTTAAAATAAATATTTTAGTAAATGAATCAAATAAAAAAACTCAATATTACATATAGAGTTAATTAT‑‑ATATAT‑‑ATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAAtt                                                                         <  2:4441839/128‑1 (MQ=255)
                                                          tATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑GATATATAT‑‑ATATATATATATATATATATAT‑‑GCAAGATATCAGAATAatattttgatttt                                                                         >  2:3441602/1‑119 (MQ=255)
                                                          tATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATAT‑‑ATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGa                                                                     >  1:7292362/1‑128 (MQ=255)
                                                             ttttAAAATAAATATATTAGTAAATGAAGCATAGAAAAAACCTCCATATAACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑AT‑‑ATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGa                                                                <  1:5993116/128‑1 (MQ=255)
                                                                tAAAATAAATATTTTAGGAAATGAATCAAAGCAAATACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑AT‑‑ATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGtt                                                             <  2:9134197/128‑1 (MQ=255)
                                                                tAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATAT‑‑ATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAg                                                               >  1:3088545/1‑128 (MQ=255)
                                                                  aaataaatATTTTAGGAAATGAAGCAAACAAAAAACCTCCATATTAACTATATAGTTAAT‑‑G‑‑‑‑ATAT‑‑ATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGtt                                                             <  2:5951108/128‑1 (MQ=255)
                                                                  aaataaatATATTAGTAAAAGAACCAAATAAAAAAACTAAATATTAACTATAGAGTTAAT‑‑T‑‑ATATAT‑‑ATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAg                                                               <  2:9321246/128‑1 (MQ=255)
                                                                   aatatataTTTTATTAAATGAAACAAATAAAAAAAATCAATATTTCCTATAGAGTTAAA‑‑G‑‑ATATAT‑‑ATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGt                                                              <  1:677531/128‑1 (MQ=255)
                                                                      aaataTTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑ATATAT‑‑ATATATATATATATATATATAA‑‑TAAAGCGATCAGCATAAAATGGAGAAATTgagagatctgaaga                                                           >  1:5279778/1‑118 (MQ=255)
                                                                         tatattattataTGAAGCAAATAAAAAAACTCCATATTATCTATATAGTTAAT‑‑G‑‑‑‑ATAT‑‑ATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTa                                                      <  1:4665843/117‑1 (MQ=255)
                                                                           ttttAGGAATTGTAGCAAAGCAAAAATCTCCATATTATCTATATAGTTTAT‑‑G‑‑‑‑ATAT‑‑ATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTaaa                                                    <  2:424499/128‑1 (MQ=255)
                                                                            tttAGGAAATGAATCAAATAAAAAACCTCCATATTAACTATATAGATAAT‑‑T‑‑ATATAT‑‑ATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTaa                                                     <  1:8431747/128‑1 (MQ=255)
                                                                                 gAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑ATATAT‑‑ATATATTTATATATATATATAT‑‑GCTAGCGATCAGAAGAATATTGTGAAATTTAGATCTGAGTTGGTCTTAAATTTg                                                >  2:2856438/1‑128 (MQ=255)
                                                                                     ttaagataagaaaaAACCTCTATATTATCTATATAGTTAATTAT‑‑ATATAT‑‑ATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTa                                              <  1:4345083/121‑1 (MQ=255)
                                                                                     agAATCAAATCAAAAAACACAATATAACCTATAGAGTTAAT‑‑GATATATAT‑‑ATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTa                                              <  2:8192053/127‑1 (MQ=255)
                                                                                      gAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑AT‑‑ATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTttta                                       <  1:354717/128‑1 (MQ=255)
                                                                                        agcaaagcaaAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑ATATAT‑‑ATATATATATATATATATATA‑‑‑‑ATATAGATCAGAAAATAATTTTGAAATTTATATATGAGTTTTGGTTATATTTTTATTTttta                                       >  1:7427591/1‑128 (MQ=255)
                                                                                         gcaaagcaaaAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATAT‑‑ATATATATATATATATATATAT‑‑GCTAGCGATCAGCATAAAATTGTGATATTTAGATCTTAGTTTGTATTAATTTTGTATTTtttat                                      >  2:6394291/1‑128 (MQ=255)
                                                                                          aaaatcaaaAACCTACATATTACCTATAGAGTTAAT‑‑G‑‑ATATAT‑‑ATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTttta                                       <  1:9632278/127‑1 (MQ=255)
                                                                                             agcaaaAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑ATATAT‑‑ATATATATATATATATATATAT‑‑GAAAGCGATCAGCATATAATGGTGAAATTTAGATCTGTGTTGGTCTTATTTTTTTAGTTtttattt                                    >  2:4588574/1‑128 (MQ=255)
                                                                                             agcaaaAACCTCCATATTAAATATAGAGATAAT‑‑T‑‑ATATAT‑‑ATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTtttattt                                    <  2:7706789/128‑1 (MQ=255)
                                                                                              gaaaaaaCCTCCATATTACCTATAGAGTTAAT‑‑G‑‑ATATAT‑‑ATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTtttattta                                   <  1:3245102/126‑1 (MQ=255)
                                                                                               caaaAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑ATATAT‑‑ATATATATATATATATATATATAAGCAAGCTCTCAGAATAAAATTGATATATATATATCTGTGTTGGTCTTAAATTTGTAGTTtttattt                                    >  1:8844638/1‑128 (MQ=255)
                                                                                                 aaaaCCTCCATATTACCTATAGAGTTAAT‑‑G‑‑ATATAT‑‑ATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTTGTCTTAAATATGTAGTTTTTATTTATAg                                >  1:6414891/1‑128 (MQ=255)
                                                                                                  aaaCCTCTATATTACATATAGAGTTAAT‑‑‑‑‑‑‑‑TAT‑‑ATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTtat                           <  1:9475117/128‑1 (MQ=255)
                                                                                                   aaCCTCCATATTACATATAGATTAAAT‑‑G‑‑ATA‑‑‑‑‑A‑ATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTtata                          <  2:3760436/128‑1 (MQ=255)
                                                                                                     ccTCCATATTACCTTTAGAGTTAAT‑‑G‑‑‑‑ATAT‑‑ATATATATATATATGTATATAT‑‑GAAATAGATCAGCAAAAAATGGTTAAATTTAGATATGAAATGGTCTTATATTTATATATTTTATATATAGTGtata                          >  2:3116560/1‑128 (MQ=255)
                                                                                                     ccTCCATATTACCTATAGAGTTAAT‑‑G‑‑ATATAT‑‑ATATATATATATATATATATAT‑‑TCAAGCGATCAGCATAAAATGGTGAAATTTAGCTATGAGTTGATCTAATATATGTAGTTTTTTTTTATATTTta                            >  2:1108914/1‑128 (MQ=255)
                                                                                                       tCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATAT‑‑ATATATATATATATATATATAT‑‑GCAAGCGATAAGCATATAATGGTGATATTTAGATCTGAGTTGGTCTTAAATTTTTAGTTTTTATTTATAGTTTATaaa                        >  2:5339360/1‑128 (MQ=255)
                                                                                                       tCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑AT‑‑ATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGt                      >  2:2463034/1‑128 (MQ=255)
                                                                                                        ccATATTACCTATAGAGTTAAT‑‑G‑‑ATATAT‑‑ATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTTGTCTTATATATGTAGTTTTTATTTATAGTtaataa                         >  1:8105861/1‑128 (MQ=255)
                                                                                                         cATATTACCTATAGAGTTAAT‑‑G‑‑ATATAT‑‑ATATATATATATATATATA‑A‑‑‑GAAAGAGATCAAAAAAAAATTGATAAATATATATCTGATATTATATTATATTTTTTTTTTTTTTTTATTTTTTATaaatt                      >  2:2071517/1‑126 (MQ=255)
                                                                                                         cATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑AT‑‑ATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTta                    <  1:6612789/128‑1 (MQ=255)
                                                                                                          atatTACCTATAGAGTTAAT‑‑G‑‑ATATAT‑‑ATATATATATATATATATATAT‑‑GAAAGCGATCAGAATAAAATTGTGAAATTTATATCTGAGTTTGTATTAAATTTTTATTTTTTATTTATAGTTTATaaat                       >  2:7335993/1‑127 (MQ=255)
                                                                                                            atTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑AT‑‑ATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTATTTTTTATTTATAGTTTATAAAGTtaata                 >  1:3794985/1‑128 (MQ=255)
                                                                                                              tACGTATAGAGTTAAT‑‑G‑‑ATATAT‑‑AGATATATCTATATATATATCT‑‑GCAAGCGATCAGCATAACATGGTGATAGTTAGATCTGAGGTGGGCTTAAATTTGGAGGTGTTATTTATAGTTTATAAAGTtaa                   <  2:8908680/128‑1 (MQ=255)
                                                                                                               acatataGAGTTAAT‑‑GATATATAT‑‑ATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGCGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTta                    <  1:2486215/125‑1 (MQ=255)
                                                                                                                ccTATAGAGTTAAT‑‑G‑‑‑‑ATAT‑‑ATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTATATCTGAGTTTGTCTTAAATTTGTAGTTTTTATTTATATTTTATAAAGTTaataat               >  1:2644930/1‑128 (MQ=255)
                                                                                                                    ttgagTTAAT‑‑G‑‑ATATATAAATATATATATATATATATATAA‑‑GAAAGCGAACCAAATAAAATGTTGAAATTTAGATCTGAGTAGCTCTTAATATTATAGAATATATTTATAGTTTATAAAGATtataat               >  1:9299615/3‑128 (MQ=255)
                                                                                                                    taGAGTTAAT‑‑G‑‑ATATAT‑‑ATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGATATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATATAGTTAATAAttt             >  1:3653452/1‑128 (MQ=255)
                                                                                                                    taGAGTTAAT‑‑G‑‑‑‑ATAT‑‑ATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAATTGGTGAAATTTAGATCTGAGTTGGTCTTATATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAg           >  2:4975716/1‑128 (MQ=255)
                                                                                                                     atagTTAAT‑‑G‑‑ATATAT‑‑ATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTa            <  2:1671024/126‑1 (MQ=255)
                                                                                                                      gagTTAAT‑‑GATATATAT‑‑ATATATATATATATATATATAT‑‑GCAAGCGATCAGAATAAAATTGAGAAATTTAGATCTGAGTTGGTCTTATATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAAttt             >  1:8719836/1‑128 (MQ=255)
                                                                                                                      gagTTAAT‑‑G‑‑‑‑ATAT‑‑ATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAt         >  2:56569/1‑128 (MQ=255)
                                                                                                                       atagttatatatatatat‑‑atatatatatatatatatatat‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAAtt              <  2:1478380/116‑1 (MQ=255)
                                                                                                                         atAAT‑‑G‑‑ATATAT‑‑ATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAtt        <  1:7125770/127‑1 (MQ=255)
                                                                                                                          tAAT‑‑G‑‑ATATAT‑‑ATATATATATATATATATATAT‑‑GCAAGCGAACAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAttt       <  2:3912541/128‑1 (MQ=255)
                                                                                                                             t‑‑G‑‑ATATAT‑‑ATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTa    <  2:268432/128‑1 (MQ=255)
                                                                                                                                   |                                                                                                                                   
GAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑ATATAT‑‑ATATATATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAAT  >  CP016816/437754‑438008

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.