| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP016816 | = 437880 | 406 (0.110) | 1478 (0.320) +ATAT |
183/188 | 1.7 | 74.9% | intergenic (‑184/+238) | JCVSYN2_01985/JCVSYN2_01990 | glycosyl transferase/ABC transporter permease |
| ? | CP016816 | 437881 = | 502 (0.100) | intergenic (‑185/+237) | JCVSYN2_01985/JCVSYN2_01990 | glycosyl transferase/ABC transporter permease | |||||
Only 100 of 1981 total aligned reads displayed.
GAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP016816/437754‑437880‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATATGCA‑‑‑‑AGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAA > CP016816/437881‑438007 |||||||| GAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑A > 1:10013190/1‑128GAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑A > 1:2033904/1‑128 AACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATA > 2:678185/1‑128 CTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCTAAATCCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATA > 2:2009372/1‑128 TTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATAT > 1:1690643/1‑128 TTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATAT > 1:3684800/1‑128 TATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATA > 1:9748299/1‑128 ATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAAGCAAAGCAAAAACCTCCAAATTAACTATAGAGTTATT‑‑G‑‑‑‑ATATATAT > 1:2993084/1‑128 TTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATA > 2:3950580/1‑128 TTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑AT > 2:3773834/1‑121 TTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACATATAGAGTTAAT‑‑G‑‑‑‑ATATATATA > 1:6634283/1‑128 TTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATTAAGCAAAGCAAAAACCTCCATATTAAATATAGATTTAAT‑‑G‑‑‑‑ATATATATAT > 2:6482339/1‑128 TTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAATAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATAT > 2:5312522/1‑128 GTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATAT > 2:8432785/1‑128 AGTTGTTAGTTTCATTTTAAATAAATATTAGAAATAAAAATTTTATTTTTAAAATAAATATTTTATCAAAAGAAGCAAAGCAAAAACCTCAATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATAT < 2:4476163/128‑1 GTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATATTATTTTTAAAATAAATATTTTAGTAAATGAAGCAAATAAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATA < 2:10156042/128‑1 TTGTAAGATTCATTTTTAATAAATATTAGAAATAAAAATAGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGATAAA‑‑G‑‑‑‑ATATATATATATATATAT < 2:1488176/128‑1 TAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATATTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACATATAGAGATAAT‑‑G‑‑‑‑ATATATATATATATATATATA > 1:2577221/1‑128 AAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTACATATTAACTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATAT > 2:4325140/1‑128 ttttTTTTTAATAAATATTAGAAATAAAAATTTTATTTTTAAAATAAATATTTTTGTAAATGAATCAAAGAAAAAACATCAATATTATATATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATAT < 1:393786/124‑1 TTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAACGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATAT > 1:8111605/1‑128 gATTTTTAATAAATATTATAAATAAAAATTGTATTTTTAAAATAAATATTTTATTAAATGAAGAAAAGCAAAAAACTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATAT < 1:32127/127‑1 ATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATTTATATA > 1:4801843/1‑128 TTTTAATAAATATTATAAATAAAAATTTTATTTTTAAAATAAATATTTTATTAAATGATGCAAAGCAAAAAACTCCATATTACCTATAGAGTTAAT‑‑T‑‑‑‑ATATATATATATATATATATATATATATATg < 1:5538442/128‑2 TTTAATAAATATTATAAATAAAAAATGAATATTTAAAATAAATATTTTAGTAAATCAACCAAAGCAAAAACCTCAATATAAACTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATAAATATATAT < 2:6175342/128‑1 TTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATATAT > 1:8339831/1‑128 TTAATAAATATTAGAAATAAAAATTTTATTTTTAAAATAAATATTTTATTATATTAATAAAAGAAAAAAACTCCATATTATCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATATgca < 1:2784947/128‑4 TAATAAATATAATATATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAAGCAAATCAAAAACATCAATATTAACTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATATATGC < 1:7775242/128‑1 TAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTATCTATAGAGTTAAT‑‑T‑‑‑‑ATATATATATATATATATATATATATATATATGCA‑‑‑‑AG < 1:7364174/128‑1 TAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATATATataaa > 1:6967989/1‑123 AATATTATAAATAAAAATTTTATTTTTAAAATAAATATTTTAGGAAATTTATCAAATCAAAAACCTCCATATAATATATATAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATATATGCA‑‑‑‑AGCG < 2:3461918/128‑1 AATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATATATatgctag > 2:7874400/1‑121 AATATTAGAAATAAAAAATGTATTTTTAAAATAAATATTTTATTAAATGAAGAAAATCAAAAAACTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATATATatgcaag < 2:6302098/128‑8 ATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACATATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATATAaaagagatc > 2:663364/1‑119 TATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTATGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑T‑‑‑‑ATATATATATATATATATATATATATATATATattcaagag > 1:8921401/1‑119 AGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATATATGAA‑‑‑‑AGCGATCAGC > 2:7135495/1‑128 AAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAAGCAAAGAAAAAAACTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATATATGCA‑‑‑‑AGCGATCAGCAT < 2:1609397/128‑1 ATAAAAATTTTATTTTTAAAATAAATATTTTATTAAATTAAGAAAATAAAAAAACTCCATATTATCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATATATGCA‑‑‑‑AGCGATCAGCATAA < 2:10275505/128‑1 ATAAAAATTTTATTTTTAAAATAAATATTTTATTAAATGAATCAAAGAAAAAACCTCAATATTACATATAGAGTTAAT‑‑GAT‑‑ATATATATATATATATATATATATATATATATGCA‑‑‑‑AGCGATCAGCAT < 1:6407085/128‑1 TAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATATATACA‑‑‑‑ATCGATCAGCATAAt > 1:9970305/1‑127 TAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATATATGCT‑‑‑‑AGCGATCAGCATAATAT > 2:4880099/1‑128 AAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑GAT‑‑ATATATATATATATATATATATATATATATATGCA‑‑‑‑AGCGATCAGCATAAt > 2:907744/1‑127 AAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACATATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATAGATATAAGCA‑‑‑‑AGAAATCAGAATAAAATG > 2:7582542/1‑128 aaaTGTATTTTTAAAATAAATATTTTATGAAATGAATCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATATATGCA‑‑‑‑AGCGATCAGCATAAAATGGTG < 2:7726113/125‑1 tatTATTTTTAAAATAAATATTTTATTAAATGAATCAAAACAAAAAACTCCATATTACATATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATATATGCA‑‑‑‑AGCGATCAGCATAAAATGGTG < 2:8676245/125‑1 TTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATATATGCA‑‑‑‑AGCGATCAGCATAAAATTGTG > 1:7960527/1‑128 GTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAGGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATAAATTCA‑‑‑‑ATCGAGCACCAAAAAAacggcaa > 1:5302121/1‑121 GTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAAACTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATATATGCA‑‑‑‑ATCTATCATCATAAAATAGAGAA > 2:8846752/1‑128 TATTATTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATAAATATATGCA‑‑‑‑AGCGAACAGCATAAAATGTTTAAA > 2:6058805/1‑128 ATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATATATGCT‑‑‑‑AGAGATCAGCATAAAATGGAGAAAT > 1:10364805/1‑128 TTTTAAAATAAATATTTTATTAAATGAAGCAAATCAAAAACATCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATATATGCA‑‑‑‑AGCGATCAGCATAAAATGGTGAAATTT < 1:6092709/128‑1 TTTTAAAATAAATATTTTAGGAAATGAAGCAAATAAAAAACATCCATATTACATATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATATATGCA‑‑‑‑AGCGATCAGCATAAAATGGTGAAATTT < 2:8197518/128‑1 TTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATATATGCA‑‑‑‑AGCGATCAGAATAAAATGGTGAAATTTAta > 2:3317682/1‑126 AATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATATATTCA‑‑‑‑AGCTATCAGAATAAAATGGATAAATTTAGtaca > 1:1852503/1‑124 aAAATATTTTATTAAATGAATCAAATCTAAAAACTCAATATTAACTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATATATGCA‑‑‑‑AGCGATCAGCATAAAATGGTGAAATTTAGATCTGA < 1:1060713/127‑1 AATATTTTAGTAAATGAAGCAAATCAAAAACCTCTATATTACCTATAGAGTTAAT‑‑GAT‑‑ATATATATATATATATATATATATATATATATGCA‑‑‑‑AGCGATCAGCATAAAATGGTGAAATTTAGATCTGA < 2:1141570/128‑1 AATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑GAT‑‑ATATATATATATATATATATATATATATATATCCA‑‑‑‑AGCTATAAGCATAAAATTTTGAAATATAGATCTGt > 1:4611368/1‑127 AATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATATATGCA‑‑‑‑AGCGATCAGCATAAAATGGTGATATTTAGATCTGTGT > 1:1311068/1‑128 AATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATATATGAT‑‑‑‑AGCGATCATAATAAAATTGTGATATTTATATCTGAGT > 2:7287868/1‑128 ATATTTTAGTAAATTAACCTAAGAAAAAACCTCCATATAAAATATAGAGTTAATTAT‑‑‑‑ATATATATATATATATATATATATATATATATGCA‑‑‑‑AGCGATCAGCATAAAATGGTGAAATTTAGATCTGAG < 2:5458875/128‑1 ATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑GATATATATATATATATATATATATATATATATATATGAA‑‑‑‑AGCGATCAGAATAAAATTGTGAAATTTATATCTG > 2:9793289/1‑128 ATATTTTAGGAAATGAAGCAAAGCAAAAAACTCCATATTACATATATAGTTAATTAT‑‑‑‑ATATATATATATATATATATATATATATATATGCA‑‑‑‑AGCGATCAGCATAAAATGGTGAAATTTAGATCTGAG < 1:6244084/128‑1 TTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATATATATATTATAGCGATCATCATAAAATTCTGAAATTTAGATCTGTGT > 2:8027210/1‑128 TTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑GAT‑‑ATATATATATATATATATATATATATATATATGAA‑‑‑‑AGAGATCAGCATAAAATGGTGAAATATAGATCTGAGTTta > 2:9208147/1‑126 TTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATATATTCA‑‑‑‑AGCGATCATCATAAAATGGATATATTTATATCTGAGTTGGTa > 1:4090703/1‑127 agtAAATCAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATATATGCA‑‑‑‑AGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAA < 2:9608255/125‑1 GGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑GATATATATATATATATATATATATATATATATATATGCT‑‑‑‑AGCTATCAGAATAAAATGGTGAAATTTAGATCTGAGTTGGTC > 1:8709643/1‑128 GAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATATATGAA‑‑‑‑AGCTAACATCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTAAAA > 1:3474773/1‑128 AAATTAATCACAGAAAAAAACTAGATATTAAATATAGAGTTTAT‑‑G‑‑‑‑ATATATATTTATATATATATATATATATATATGCA‑‑‑‑AGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAAT < 1:2422482/128‑1 ATGAAGCAAAGCAAAAACCTCCATATTACCTTTAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATATTAG‑‑‑‑‑‑AGCGATCAGCATAAAATGGTTAAATTTATATATGTATTTGTCTTAAATTTGT > 1:7121455/1‑128 taataaaataAAAAAAATCAATATTAAATATATAGTTAAT‑‑T‑‑‑‑ATATATATATATATATATATATATATATATATGCA‑‑‑‑AGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGT < 2:2357361/118‑1 GCAAATAAAAAAACACTATATTATCTATAGAGTTAAT‑‑T‑‑‑‑ATATATATATATATATATATATATATATATATGCA‑‑‑‑AGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGT < 1:8532461/128‑1 AAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATATATGCA‑‑‑‑AGCGAACAGCAAAAAATGTAGAAATATATATCTGAGATGATATAATATTTATAGTTT > 2:4688998/1‑128 aataAAAAAACTCTATATTAACTATATAGATAAT‑‑‑‑‑‑‑‑TATATATATATATATATATATATATATATATGCA‑‑‑‑AGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTA < 2:582967/124‑1 GCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATATATGAA‑‑‑‑AGCTATCAGAATAAAATTGTTATATTTATATCTGAGTTTGTCTTATATTTATAGTTTTTA > 2:415571/1‑128 CAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATATATGCA‑‑‑‑AGCGCTCAGAATAAAATGGTGAAATTTATATCAGAGTTGGTCATAAATTTCTAGTTTTTATTT > 2:3610231/1‑128 tAAAACCTCCATATTATCTATAGAGTATTT‑‑G‑‑‑‑ATATATATATATATATATATATATATATATATGAA‑‑‑‑AGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATT < 2:697453/127‑1 aaaacatatATATTAAATATAGAGTTAAT‑‑T‑‑‑‑TTATATATATATATATATATATATATATATATGCA‑‑‑‑AGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTT < 1:10192006/119‑1 AAAACCTCCATATTACCTATAGAGTTAAT‑‑GAT‑‑ATATATATATATATATATATATATATATATATGCA‑‑‑‑AGCGATCAGCATAAAATGTTGAAATTTAGATCTGAGTTTGTCTTAAATTTGTATTTTTTAT > 2:2470220/1‑128 AAACCTCCATAATACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATATATGCA‑‑‑‑AGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATA < 1:4979516/128‑1 AACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATATATGAA‑‑‑‑AGCGATCAACATAAAATGGTGAAATTTATATCTGAGTTTGTCTTAAATATTTAGTTTTTATTTAT > 1:5771702/1‑128 AACATCTATATTAACTATAGAGATAAT‑‑T‑‑‑‑ATATATATATATATATATATATATATATATATGCA‑‑‑‑AGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTAT < 2:2186672/128‑1 CCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATAT‑T‑CA‑‑‑‑AGCGATCAGCATAAAATTTTTAAATTTATATCTGTGTTGGTCTTAAATTTATATTTTTTATTTATAGTT > 1:2242876/1‑128 CCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATATATGCA‑‑‑‑AGAGATCACTATAAAATGTTGAAATTTAGATCTGAGTTGTTTTAAATTTTGGAGTTTTTTTATATttttt > 1:6834276/1‑123 aCTATAGAGTTAAT‑‑GAT‑‑ATATATATATATATATATATATATATATATATGCA‑‑‑‑AGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAG < 1:599872/127‑1 TATAGAGTTAAT‑‑GAT‑‑ATATATATATATATATATATATATATATATATGCA‑‑‑‑AGCGATCATCATAAAATTGTGAAATTTATATCTGAGTTGGTCTTAAATTTTTAGTTTTTATATATAGTATATAAAGTT > 2:10454551/1‑128 ATAGAGTTAAT‑‑GAT‑‑ATATATATATATATATATATATATATATATATGCA‑‑‑‑CGCGCTCATCATAAAATTGTTAAATTTAGATATGAGTTGGTCTTAATTTTGTAGTTTTTATTTATAGTATATTAAGTTA > 2:3093064/1‑128 ATAGAGTTAAA‑‑GAT‑‑ATATATATATATATATATATATATATATATATGCA‑‑‑‑AGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTA < 2:2869414/128‑1 ATAGAGTAAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATATATGCA‑‑‑‑AGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAAT < 1:7583679/128‑1 TAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATATATGCA‑‑‑‑AGCGCTCAGCATAAATTGGTGAAATATAGATCTGAGTTTGTCTTAAATTTGTAGTTTTTTTTTATAGTTTATAAAGTTTATt > 2:1818883/1‑127 TAGAGTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATATATGCA‑‑‑‑AGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTTGTTTTTATTTATAGTTTATAAAGTTAATAAT > 1:1510037/1‑128 GTTAAT‑‑T‑‑‑‑ATATATATATATATATATATATATATATATATGCA‑‑‑‑AGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTT < 2:9463864/128‑1 GTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATATATGCA‑‑‑‑AGAGATCAGAATAAAATTTTTAAATTTAGATATGATTTTGTCTTAAATTTGTATTTTATATTTATAGTTTATAAAGTTAATAATTa > 2:7448102/1‑127 tttAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATATATGCA‑‑‑‑AGCGATCATCATAAAATGGTGAAATTTAGATCTGAGTTTGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTA < 2:5096025/125‑1 TTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATATATGCA‑‑‑‑AGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATATTTTATATAGTTAATAATTTA > 2:5615191/1‑128 aatgatatATATATATATATATATATATATATATATATATGCA‑‑‑‑AGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATT < 2:263102/120‑1 agtttatTATATATATATATATATATATATATATATGCA‑‑‑‑AGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGA < 1:9352567/121‑1 aaATATATATATATATATATAAATATATATATATGCA‑‑‑‑AGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATT < 1:4358870/126‑1 ATATATATATATATATATATATATATATATATGCA‑‑‑‑AGCGATCAGAATAAAATTGTTAAATTTATATCTGAGTTTGTCTTAAATTTTTATTTTTTATTTATATTTTATAAAGTTAATAATTTATATTTT > 1:914056/1‑128 ATATATATATATATATATATATATATATATGCT‑‑‑‑AGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTATTAAATTTGTAGTTTTTATATATATTTTATATATTTAATAATATAGATTTTTt > 2:1321926/1‑127 |||||||| GAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP016816/437754‑437880‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATATGCA‑‑‑‑AGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAA > CP016816/437881‑438007 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |