New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 = 1775361765 (1.190)69 (0.050) 38/226 21.8 4.2% coding (643/645 nt) JCVSYN2_00735 hypothetical protein
?CP016816 = 177541 1535 (1.160)intergenic (+3/+16) JCVSYN2_00735/JCVSYN2_00740 hypothetical protein/translation initiation factor IF‑2
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 1779 total aligned reads displayed.

AAATAGTACCAACAAAAAAACAATTAAAACAAATTAAAAAACAAGAATACAAACTTTCTAAACAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAAAAATATCTTCTTCTTTAATATCATTAAAGTTTTTAATAGTTAATCCACCTTCAAAACCAGCTTTAATTTCTTTAGCATCT  >  CP016816/177414‑177668
                                                                                                                                |                                                                                                                               
 aaTAGTACCAACAAAAAAACAATTAAAACAAATTAAAAAACAAGAATACAAACTTTCTAAACAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGaaaa                                                                                                                                >  1:3109369/1‑128 (MQ=255)
   tAGTACCAACAAAAAAACAATTAAAACAAATTAAAAAACAAGAATACAAACTTTCTAAACAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAgt                                                                                                                              >  2:2541189/1‑128 (MQ=255)
    aGTACCAACAAAAAAACAATTAAAACAAATTAAAAAACAAGAATACAAACTTTCTAAACAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAgtc                                                                                                                             >  2:399621/1‑128 (MQ=255)
    aGTACCAACAAAAAAACAATTAAAACAAATTAAAAAACAAGAATACAAACTTTCTAAACAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAgtc                                                                                                                             >  2:131728/1‑128 (MQ=255)
      tACCAACAAAAAAACAATTAAAACAAATTAAAAAACAAGAATACAAACTTTCTAAACAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAAGACAGCGTAGAAAAggct                                                                                                                            >  2:549825/1‑128 (MQ=255)
      tACCAACAAAAAAACAATTAAAACAAATTAAAAAACAAGAATACAAACTTTCTAAACAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAgtctg                                                                                                                           <  1:247637/128‑1 (MQ=255)
      tACCAACAAAAAAACAATTAAAACAAATTAAAAAACAAGAATACAAACTTTCTAAACAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAgtctg                                                                                                                           <  1:1668151/128‑1 (MQ=255)
      tACCAACAAAAAAACAATTAAAACAAATTAAAAAACAAGAATACAAACTATCTAAACAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAgtctg                                                                                                                           <  1:1306431/128‑1 (MQ=255)
       aCCAACAAAAAAACAATTAAAACAAATTAAAAAACAAGAATACAAACTTTCTAAACAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAgtctgt                                                                                                                          <  1:509859/128‑1 (MQ=255)
       aCCAACAAAAAAACAATTAAAACAAATTAAAAAACAAGAATACAAACTTTCTAAACAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAgtctgt                                                                                                                          >  2:3093706/1‑128 (MQ=255)
        ccAACAAAAAAACAATTAAAACAAATTAAAAAACAAGAATACAAACTTTCTAAACAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAgtctgtc                                                                                                                         <  2:715623/128‑1 (MQ=255)
         caacaaAAAAACAATTAAAACAAATTAAAACACAAGAATACAAACTTTCTAAACAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAgtctgtct                                                                                                                        <  2:2759572/128‑1 (MQ=255)
           acaaAAAAACAATTAAAACAAATTAAAAAAAAAGAATAAAAACTTTATAAACAAAAAGAATATGAAGAAATTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCttt                                                                                                                      <  1:2001583/128‑1 (MQ=255)
             aaaaaaaCAATTAAAACAAATTAAAAAACAAGAATACAAACTTTCTAAACAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCttttt                                                                                                                    <  1:1001280/128‑1 (MQ=255)
               aaaaaCAATTAAAACAAATTAAAAAACAAGAATACAAACTTTCTAAACAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTaa                                                                                                                  >  1:761454/1‑128 (MQ=255)
                aaaaCAATTAAAACAAATTAAAAAACAAGAATACAAACTATCTAAACAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAat                                                                                                                 <  2:1968394/128‑1 (MQ=255)
                   aCAATTAAAACAAATTAAAAAACAAGAATACAAACTTTCTAAACAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAattat                                                                                                              <  1:1793934/128‑1 (MQ=255)
                    cAATTAAAACAAATTAAAAAACAAGAATACAAACTTTCTAAACAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAattatt                                                                                                             <  2:1639115/128‑1 (MQ=255)
                    cAATTAAAACAAATTAAAAAACAAGAATACAAACTTTCTAAACAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAattatt                                                                                                             >  2:345105/1‑128 (MQ=255)
                     aaTTAAAACAAATTAAAAAACAAGAATACAAACTTTCTAAACAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCtt                                                                                                                       <  1:1575362/117‑1 (MQ=255)
                     aaTTAAAACAAATTAAAAAACAAGAATACAAACTTTCTAAACAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTaattaatt                                                                                                            >  2:1838516/1‑128 (MQ=255)
                     aaTTAAAACAAATTAAAAAACAAGAATACAAACTTTCTAAACAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTAttt                                                                                                            >  2:638305/1‑128 (MQ=255)
                       ttAAAACAAATTAAAAAACAAGAATACAAACTTTCTAAACAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTaa                                                                                                          >  1:3054246/1‑128 (MQ=255)
                       ttAAAACAAATTAAAAAACAAGAATACAAACTTTCTAAACAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTATATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTaa                                                                                                          >  2:891178/1‑128 (MQ=255)
                        tAAAACAAATTAAAAAACAAGAATACAAACTTTCTAAACAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATATGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAAt                                                                                                         >  1:1938274/1‑128 (MQ=255)
                         aaaaCAAATTAAAAAACAAGAATACAAACTTTCTAAACAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCATTTAAATTATTTAAtt                                                                                                        >  1:144905/1‑128 (MQ=255)
                           aaCAAATTAAAAAACAAGAATACAAACTTTCTAAACAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTg                                                                                                      >  1:2843698/1‑128 (MQ=255)
                           aaCAAATTAAAAAACAAGAATACAAACTTTCTAAACAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTAGTTAATTTg                                                                                                      >  2:2034192/1‑128 (MQ=255)
                              aaaTTAAAAAACAAGAATACAAACTTTCTAAACAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTc                                                                                                   >  1:2251221/1‑128 (MQ=255)
                                 ttAAAAAACAAGAATACAAACTTTCTAAACAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTAt                                                                                                >  2:1267655/1‑128 (MQ=255)
                                  tAAAAAACAAGAATACAAACTTTCTAAACAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTAtt                                                                                               <  2:827235/128‑1 (MQ=255)
                                   aaaaaaCAAGAATACAAACTTTCTAAACAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTAttt                                                                                              <  2:507222/128‑1 (MQ=255)
                                     aaaaCAAGAATACAAACTTTCTAAACAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTta                                                                                            <  2:1146129/128‑1 (MQ=255)
                                     aaaaCAAGAATACAAACTTTCTAAACAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTta                                                                                            <  1:1136390/128‑1 (MQ=255)
                                     aaaaCAAGAATACAAACTTTCTAAACAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTta                                                                                            <  1:1049444/128‑1 (MQ=255)
                                      aaaCAAGAATACAAACTTTCTAAACAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACATACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTtat                                                                                           <  2:2175200/128‑1 (MQ=255)
                                        acaacaATACAAACTTTCTAAACAAAACGAATATGAAGATCTTTTAAAGTTTAAAGAAAAATTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATaa                                                                                         <  1:2075064/128‑1 (MQ=255)
                                        aCAAGAATACAAACTTTCTAAACAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAg                                                                                                                               >  2:3059031/1‑90 (MQ=255)
                                        aCAAGAATACAAACTTTCTAAACAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATaa                                                                                         <  2:1756964/128‑1 (MQ=255)
                                        aCAAGAATACAAACTTTCTAAACAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTCTTAATTATTTAATTTGTTCTATTTTATaa                                                                                         <  1:1251307/128‑1 (MQ=255)
                                         cAAGAATACAAACTTTCTAAACAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAg                                                                                        >  1:1183629/1‑128 (MQ=255)
                                         cAAGAATACAAACTTTCTAAACAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAg                                                                                        >  1:2710614/1‑128 (MQ=255)
                                            gAATACAAACTTTCTAAACAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAGAAAGACTATAAAATTCTGTCTTTTTAATTTTTTAATTTTTTATATTTTATAAGCtta                                                                                    >  2:2889811/1‑127 (MQ=255)
                                                aCAAACTTTCTAAACTAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCaaa                                                                                 <  2:2491044/128‑1 (MQ=255)
                                                aCAAACTTTCTAAACAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCaaa                                                                                 >  2:2232527/1‑128 (MQ=255)
                                                 cAAACTTTCTAAACAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAat                                                                                                                 <  1:374884/95‑1 (MQ=255)
                                                 cAAACTTTCTAAACAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCaaaa                                                                                >  1:2897981/1‑128 (MQ=255)
                                                   aaCTTTCTAAACAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAAAAat                                                                              <  1:3152448/128‑1 (MQ=255)
                                                     cTTTCTAAACAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAAAAatat                                                                            >  2:1453953/1‑128 (MQ=255)
                                                           aaaCAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAAAAATAtcttctt                                                                      <  2:2594981/128‑1 (MQ=255)
                                                             aCAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAAAAATAtcttcttct                                                                    <  2:100089/128‑1 (MQ=255)
                                                                aaaaGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAAAAATATCTTCTTCTTTa                                                                 >  2:228743/1‑128 (MQ=255)
                                                                aaaaGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAAAAATATCTTCTTCTTTa                                                                 >  1:897990/1‑128 (MQ=255)
                                                                aaaaGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAAAAATATCTTCTTCTTTa                                                                 >  2:2955643/1‑128 (MQ=255)
                                                                 aaaGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAAAAATATCTTCTTCTTTaa                                                                >  2:2807105/1‑128 (MQ=255)
                                                                  aaGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAAAAATATCTTCTTCTTTAat                                                               <  2:1689838/128‑1 (MQ=255)
                                                                   aGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAAAAATATCTTCTTCTTTAata                                                              <  1:633595/128‑1 (MQ=255)
                                                                    gAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAAAAATATCTTCTTCTTTAatat                                                             >  2:108289/1‑128 (MQ=255)
                                                                    gAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAAAAATATCTTCTTCTTTAatat                                                             <  1:2194243/128‑1 (MQ=255)
                                                                    gAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAAAAATATCTTCTTCTTTAatat                                                             <  2:3164495/128‑1 (MQ=255)
                                                                       tatGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAAAAATATCTTCTTCTTTAATATCAt                                                          <  2:1232871/128‑1 (MQ=255)
                                                                         tGAAGTACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAAAAATATCTTCTTCTTTAATATCATTa                                                        <  2:151748/128‑1 (MQ=255)
                                                                          gaagaaCTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAAAAATATCTTCTTCTTTAATATCATTaa                                                       >  1:2800586/1‑128 (MQ=255)
                                                                           aagaaCTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAAAAATATCTTCTTCTTTAATATCATTaaa                                                      >  2:1040338/1‑128 (MQ=255)
                                                                           aagaaCTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAAAAATATCTTCTTCTTTAATATCATTaaa                                                      <  1:47807/128‑1 (MQ=255)
                                                                            agcaCTTTTAAAGAGTAAAGAAAATTTGTATAAAAACAAGCCAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAAAAATATCTTCTTCTTTAATATCATTAAAg                                                     <  1:2589747/125‑1 (MQ=255)
                                                                             gaaCTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAAAAATATCTTCTTCTTTAATATCATTAAAGt                                                    >  1:1085100/1‑128 (MQ=255)
                                                                                       agtttaaagAATATTTGTATAAAAAAAAGACAGAGTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAAAAATATCTTCTTCTTTAATATCATTAAAGTTTTTAATAGt                                          <  2:762817/128‑1 (MQ=255)
                                                                                       agtttaaagAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAAAAATATCTTCTTCTTTAATATCATTAAAGTTTTTAATAGt                                          <  2:2720726/128‑1 (MQ=255)
                                                                                         tttaaatTAAATTTGGATAAAAAAAATACATTATTATAAAGTCTTTGTTTTTAATTATTTAATTTGTTCTTTTTTAAAACCTTCAAAAATTACTTCATTTTTAATATCATTAAAGTTTTTAATAGTTa                                        <  1:2129729/128‑1 (MQ=255)
                                                                                         tttaaagAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAAAAATATCTTCTTCTTTAATATCATTAAAGTTTTTATTAGTTa                                        >  1:1733654/1‑128 (MQ=255)
                                                                                         tttaaagAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAAAAATATCTTCTTCTTTAATATCATTAAAGTTTTTAATAGTTa                                        <  2:2405317/128‑1 (MQ=255)
                                                                                          ttaaagAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAAAAATATCTTCTTCTTTAATATCATTAAAGTTTTTAATAGTTaa                                       <  1:557604/128‑1 (MQ=255)
                                                                                          ttaaagAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAAAAATATCTTCTTCTTTAATATCATTAAAGTTATTATTATTTaa                                       >  2:1579084/1‑128 (MQ=255)
                                                                                           taaagAAAATTTGTATAAAAAAAAGACAGACTTGAAAAGTCTGTCTTTTTATTTATTTAATTTGTTCTATTTTATAAGCTTCAAAAATATCTTCTTCTTTAATATCATTAAATTTTTTAATAGTTTAt                                      >  2:956562/1‑128 (MQ=255)
                                                                                           taaagAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAAAAATATCTTCTTCTTTAATATCATTAAAGTTTTTAATAGTTAAt                                      <  1:2757400/128‑1 (MQ=255)
                                                                                                 aaaTTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTTTTCTATTTTATAAGCTTCAAAAATATATTCTTCTTTAATATAATTAAAGTTTTTAATAGTTTATCCAcat                                >  1:2418980/1‑126 (MQ=255)
                                                                                                 aaaTTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAAAAATATCTTCTTCTTTAATATCATTAAAGTTTTTAATAGTTAATCCACCt                                >  1:3015208/1‑128 (MQ=255)
                                                                                                   aTTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAAAAATATCTTCTTCTTTAATATCATTAAAGTTTTTAATAGTTAATCCACCTTc                              >  2:3006368/1‑128 (MQ=255)
                                                                                                   aTTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAAAAATATCATCTTCTTTAATATCATTAAAGTTTTTAATAGTTAATCCACCTTc                              <  1:2955323/128‑1 (MQ=255)
                                                                                                    tttGTATAAAATAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAATAATATCTTCTTCTTTAATATCATTAAAGTTTTTAATAGTTAATCCACCTTCa                             <  1:2368697/128‑1 (MQ=255)
                                                                                                     ttGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAAAAATATCTTCTTCTTTAATATCATTAAAGTTTTTAATAGTTAATCCACCTTCaa                            >  1:189856/1‑128 (MQ=255)
                                                                                                       gTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAAAAATATCTTCTTCTTTAATATCATTAAAGTTTTTAATAGTTAATCCACCTTCaaaa                          >  2:2337549/1‑128 (MQ=255)
                                                                                                       gTATAAAAAAAAGACAGACTAGAAAAGTATGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAAAAATATCTTCTTCTTTAATATCATTAAAGTTTTTAATAGTTAATCCACCTTCaaaa                          <  1:2660815/128‑1 (MQ=255)
                                                                                                         ataAAAATAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAAAAATATCTTCTTCTTTAATATCATTAAAGTTTTTAATAGTTAATCCACCTTCAAAAcc                        <  1:839055/128‑1 (MQ=255)
                                                                                                         ataAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAAAAATATCTTCTTCTTTAATATCATTAAAGTTTTTAATAGTTAATCCACCTTCAAAAcc                        <  1:427016/128‑1 (MQ=255)
                                                                                                          tataaaaaaaGAAAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTATATTTTATAAGCTTAAAAAATATCTTCTTCTTTAATATCATTAAAGTTTTTAATAGTTAATCCACCTTCAAAAcc                        <  1:2530867/125‑1 (MQ=255)
                                                                                                          agaaaaaaaaGACAGACTTGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAAAAATATCTTCTTCTTTAATATCATTAAAGTTTTTAATAGTTAATCCACCTTCAAAAcc                        <  1:338251/126‑1 (MQ=255)
                                                                                                            aaaaaaaaGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAAAAATATCTTCTTCTTTAATATCATTAAAGTTTTTAATAGTTAATCCACCTTCAAAACCAg                      <  1:715170/128‑1 (MQ=255)
                                                                                                              taaaaaGTAAGAGTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTAAAAAATATCTTCTTCTTTAATATCATTAAAGTTTTTAATAGTTAATCCACCTTCAAAACCAGCt                    <  1:1377762/127‑1 (MQ=255)
                                                                                                              aaaaaaGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAAAAATATCTTCTTCTTTAATATCATTAAAGTTTTTAATAGTTAATCCACCTTCAAAACCAGCt                    <  1:1633660/128‑1 (MQ=255)
                                                                                                              aaaaaaGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAAAAATATCTTCTTCTTTAATATCATTAAAGTTTTTAATAGTTAATCCACCTTCAAAACCAGCt                    >  1:950386/1‑128 (MQ=255)
                                                                                                                aaaaGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAAAAATATCTTCTTCTTTAATATCATTAAAGTTTTTAATAGTTAATCCACCTTCAAAACCAGc                     <  2:457088/125‑1 (MQ=255)
                                                                                                                   agacagacTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAAAAATATCTTCTTCTTTAATATCATTAAAGTTTTTAATAGTTAATCCACCTTCAAAACCAGCTTTAAt               <  1:1531001/128‑1 (MQ=255)
                                                                                                                          cTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAAAAATATCTTCTTCTTTAATATCATTAAAGTTTTTAATAGTTAATCCACCTTCAAAACCAGCTTTAATTTCTTTa        >  2:1889574/1‑128 (MQ=255)
                                                                                                                           tAGAAAAGTCTTTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAAAAATATCTTCTTCTTTAATATCATTAAAGTTTTTAATAGTTAATCCACCTTCTAAACCAGCTTTAATTTCTTTAg       <  2:1373885/128‑1 (MQ=255)
                                                                                                                            aGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAAAAATATCTTCTTCTTTAATATCATTAAAGTTTTTAATAGTTAATCCACCTTCAAAACCAGCTTTAATTTCTTTAGc      >  2:2634682/1‑128 (MQ=255)
                                                                                                                              aaaaGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAAAAATATCTTCTTCTTTAATATCATTAAAGTTTTTAATAGTTAATCCACCTTCAAAACCAGCTTTAATTTCTTTAGCAt    <  1:2303328/128‑1 (MQ=255)
                                                                                                                               aaaGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAAAAATATCTTCTTCTTTAATATCATTAAAGTTTTTAATAGTTAATCCACCTTCAAAACCAGCTTTAATTTCTTTAGCATc   <  2:2095069/128‑1 (MQ=255)
                                                                                                                               aaaGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAAAAATATCTTCTTCTTTAATATCATTAAAGTTTTTAATAGTTAATCCACCTTCAAAACCAGCTTTAATTTCTTTAGCATc   <  1:1843115/128‑1 (MQ=255)
                                                                                                                                |                                                                                                                               
AAATAGTACCAACAAAAAAACAATTAAAACAAATTAAAAAACAAGAATACAAACTTTCTAAACAAAAAGAATATGAAGAACTTTTAAAGTTTAAAGAAAATTTGTATAAAAAAAAGACAGACTAGAAAAGTCTGTCTTTTTAATTATTTAATTTGTTCTATTTTATAAGCTTCAAAAATATCTTCTTCTTTAATATCATTAAAGTTTTTAATAGTTAATCCACCTTCAAAACCAGCTTTAATTTCTTTAGCATCT  >  CP016816/177414‑177668

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.