New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 311155 =347 (0.380)167 (0.220) 106/210 13.8 38.7% intergenic (‑78/‑236) JCVSYN2_01300/JCVSYN2_01305 hypothetical protein/30S ribosomal protein S21
?CP016816 = 311148 238 (0.310)intergenic (‑71/‑243) JCVSYN2_01300/JCVSYN2_01305 hypothetical protein/30S ribosomal protein S21
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 304 total aligned reads displayed.

TAATAATTTTTCAAATTACTTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCAT‑‑TATATATATATATATATATA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP016816/311299‑311155
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tatatatatatatatatataATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAGTTCATTTGGATTAGTTATTACAACTGGTAC  <  CP016816/311148‑311022
                                                                                                                                                                                                                                                                                   
   TAATTTTTCAAATTACTTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCAT‑‑TATAT                                                                                                                                                <  2:443305/128‑1
   TAATTTTTCAAATTACTTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACTGTTGCTATTATACCATATTTTCATTTACATATTGCAT‑‑TATATA                                                                                                                                               >  2:1206392/1‑128
   TAATTTTTCAAATTACTTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCAT‑‑TATATA                                                                                                                                               >  2:1972051/1‑128
     ATTTTTCAAATTACTTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCAT‑‑TATATATA                                                                                                                                             >  1:1946776/1‑128
       TTTTCAAATTACTTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCAT‑‑TATATATATA                                                                                                                                           >  2:1592519/1‑128
        TTTCAAATTACTTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCAT‑‑TATATATATAT                                                                                                                                          <  2:1344956/128‑1
         TTCAAATTACTTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACTGTTGCTATTATACCATATTTTCATTTACATATTTCAT‑‑TATATATATATA                                                                                                                                         <  2:643617/128‑1
          TCAAATTACTTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTCACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCAT‑‑TATATATATATAT                                                                                                                                        >  2:1438851/1‑128
           taaatatCTTTTTTTAATAAAAATAGATTTTTTTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATATACGGTTGCTATTATACCATATTTTCATTTAGATATTGCTT‑‑TATATATATATATA                                                                                                                                       <  2:1628842/121‑1
           CAAATTACTTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCAT‑‑TATATATATATATA                                                                                                                                       <  2:1130270/128‑1
               TTACTTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCAT‑‑TATATATATATATATATA                                                                                                                                   >  2:1540787/1‑128
                taaTTTTTTAAATAAAAATAGATTTTATTATTAAATAATTAGTATATTTACTATTTTTTTTCTTTATAAACGGTTTCTATTATACCATATTTTCATTTACATATTGCAT‑‑TATATATATATATATATAT                                                                                                                                  <  1:963032/125‑1
                TACTTTTTTAAATAAAAATATATTATATTAGTAAATAAGTAGTATATTAACTATTTTTTTAATATATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCAT‑‑TATATATATATATATATAT                                                                                                                                  <  2:140521/128‑1
                TACTTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCAT‑‑TATATATATATATATATAT                                                                                                                                  >  1:838093/1‑128
                 ACTTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCAT‑‑TATATATATATATATATATA                                                                                                                                 >  2:239267/1‑128
                  CTTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCAT‑‑TATATATATATATATATATAA                                                                                                                                >  1:582816/1‑128
                   TTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCAT‑‑TATATATATATATATATATAAT                                                                                                                               >  1:412962/1‑128
                      TTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCAT‑‑TATATATATATATATATATAATGAA                                                                                                                            >  2:799704/1‑128
                         AAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCAT‑‑‑‑TATATATATATATATATAATGAATGTAT                                                                                                                       <  2:1797016/128‑1
                          AATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCAT‑‑TATATATATATATATATATAATGAATGTA                                                                                                                        <  1:1607955/128‑1
                           ATAAAAATATATTTTATTAGTAAATAATTATTATATTTAATATTTTTTTACTTTATAAACGTTTGCTATTATAACATATTTTAATTTACATATTGCAT‑‑TATATATATATATATATATAATGAATGTAT                                                                                                                       <  1:1206392/128‑1
                             AAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTAATTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCATTATATATATATATATATATATAATGAATGTAT                                                                                                                       <  1:688757/128‑1
                               AAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACTGTTGCTATTATACCATATTTTCATTTACATATTGCAT‑‑TATATATATATATATATATAATGAATGTATGTTA                                                                                                                   <  2:691108/128‑1
                                AATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCAT‑‑TATATATATATATATATATAATGAATGTATGTTAT                                                                                                                  <  2:862058/128‑1
                                 ATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCAT‑‑TATATATATATATATATATAATGAATGTATGTTATA                                                                                                                 >  2:1845279/1‑128
                                 ATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCAT‑‑TATATATATATATATATATAATGAATGTATGTTATA                                                                                                                 <  1:799704/128‑1
                                   atATTTTATTAGTATATTAGTTGTATATTTAATATTTTTTTAATTTATAAACGGTTGCTATTATACCATATTTTCATTTAAATATTTAAT‑‑TATATATATATATATATATAATGAATGTATGTTATATA                                                                                                               <  1:389295/126‑1
                                       TTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGTTTGATATTATACCATATTTTCATTTACATATTTCATTATATATATATATATATATATAATGAATGTATGTTATATATG                                                                                                             <  2:1173314/128‑1
                                           TTAGTAAATAAGTTGTATATTTACTATTTTTTTACTTTATAAACTGTTGATATTATACCATATTTTCATTTACATATTGCAT‑‑TATATATATATATATATATAATGAATGTATGTTATATATGTTTTGA                                                                                                       <  1:573459/128‑1
                                           TTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTCCTATTATACCATATTTTCATTTACATATTGCAT‑‑TATATATATATATATATATAAAGAATATATGTTATATATGTTTTGA                                                                                                       >  2:1296801/1‑128
                                              GTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCATTATATATATATATATATATATAATGAATGTATGTTATATATGTTTTGAA                                                                                                      <  2:1597768/128‑1
                                               TAAATAATTATTATATTTAATATTTTTTTAATTTATAAACTGTTGCTATTATACCATATTTTCATTTACATATTTCAT‑‑TATATATATATATATATATAATGAATGTATGTTATATATGTTTTGAATCG                                                                                                   <  1:467929/128‑1
                                               TAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCAT‑‑TATATATATATATATATATAATGAATATATGATATATATGTTTTGAATag                                                                                                   >  2:339009/1‑126
                                                AAATAAGTAGTATATTTATTATTTTTTTAGTTTTTATACGGTTGCTATTATATCATATTTTCATTTACATATTGCAT‑‑TTTATATATATATATATATAATGAATGTATGTTATATATGTTTTGAATCGT                                                                                                  <  2:1278907/128‑1
                                                  ATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCAT‑‑TATATATATATATATATATAATGAATGTATGTTATATATGTTTTGAATCGTAT                                                                                                <  1:1597368/128‑1
                                                   TAAGTTGTATATTTATTATTTTTTTATTTTATAAACTTTTGCTATTATAAAATATTTTAATTTACATATTGCAT‑‑TTTATATATATATATATATAATGAATGTATGTTATATATGTTTTGAATCGTATG                                                                                               <  1:1323636/128‑1
                                                   TAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCAT‑‑TATATATATATATATATATAATTAATCTATTATATATATTTTTTTAATCTTATa                                                                                               >  1:167118/1‑127
                                                     AGTAGTATATTTATTATTTTTTTTCTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCAT‑‑TATATATATATATATATATAATGAATGTATGTTATATATGTTTTGAATCGTATGTA                                                                                             <  2:495586/128‑1
                                                     AGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATAACATATTTTCATTTACATATTGCAT‑‑‑‑TATATATATATATATATAATGAATGTATGTTATATATGTTTTGAATCGTATGTAAC                                                                                           <  1:1111541/128‑1
                                                         tTATATTTAATTTTTTTTTACTTTATAAACTGTTGCTATTATACCATTTTTTCATTTACATATTTAAT‑‑TATATATATATATATATATAATGAATGTATGTTATATATGTTTTGAATAGTATGTAACAA                                                                                         <  1:116708/127‑1
                                                         GTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCAA‑‑TATATATATATATATATATAATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAA                                                                                         <  1:1615840/128‑1
                                                           ATATTTACTATTTTTTTAATTTATAAACGGTTGCTATTATACAATATTTTCATTTACATATTGCATTATATATATATATATATATATAATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAA                                                                                         <  1:904472/128‑1
                                                            TATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCAT‑‑TATATATATATATATATATAATGAATGTATGTTATATATGTTTTGAATAATATGTAACAAGTA                                                                                      >  1:597482/1‑128
                                                               TTACTATTTTTTTACTTTATAAACGGTTGATATTATACCATATTTTCATTTACATATTGCAT‑‑TATATATATATATATATATAATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTT                                                                                   <  1:845728/128‑1
                                                                 tCTATTTTTTTACTTTATAAACTTTTTATATTATACCATATTTTAATTTAAATATTGAAT‑‑TATATATATATATATATATAATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTA                                                                                 <  2:1740688/127‑1
                                                                 aaTATTTTTTTTCTTTATAAACTGTTGCTATTATACAATATTTTCATTTAAATATTGAAT‑‑TATATATATATATATATATAATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTA                                                                                 <  1:1505246/126‑1
                                                                 ACTATTTTTTTACTTTATAAAAGGTAGCTATTATACCATATTTTCATTTACATATTGCAT‑‑TATATATATATATATATATAATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTA                                                                                 <  1:525354/128‑1
                                                                  CTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCAT‑‑TATATATATATATATATATAATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTAT                                                                                <  1:1731871/128‑1
                                                                      TTTTTTTTATTTATATACGGTTGCTATTATACTATATTTTCATTTACATATTGCAT‑‑TATATATATATATATATATAATGAATGTATGTTATATATGTTTTGAATCGTATGTAACTAGTATTTTATTTT                                                                             <  2:1009399/128‑1
                                                                      TTTTTTTACTATATAAACTGTTGCTATTATAACATATTTTCATTTACATATTGAATTATATATATATATATATATATAATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATT                                                                               <  1:260038/128‑1
                                                                       TTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCAT‑‑TATATATATATATATATATAATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTT                                                                            <  2:1882447/128‑1
                                                                           TTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCAT‑‑TATATATATATATATATATAATGAATGTATGTTATATATGTTTTGAATATTATGTAACAATTATTTTATTTTTTAAT                                                                        >  2:70992/1‑128
                                                                            TACTTTATAAACGGGTGCTATTATAACATATTTTCATTTACATATTGCAT‑‑TATATATATATATATATATAATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATA                                                                       <  2:94635/128‑1
                                                                            TACTTTATAAAAGGTTTATATTATACCATATTTTCATTTACATATTGCAA‑‑TATATATATATATATATATAATGAATGTATGTTATATATGTTTTGAATCGTATGTAGCAAGTATTTTATTTTTTAATA                                                                       <  1:1065949/128‑1
                                                                               TTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCAT‑‑TATATATATATATATATATAATGAATGTATGTTATATATGTTTTGAATCGTATTTAACAAGTATTTTATTTTTTAATAAGt                                                                    >  2:1948570/1‑127
                                                                                TTATAAACTGTTGCTATTATACCATATTTTCATTTACATATTGCAT‑‑TATATATATATATATATATAATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGG                                                                   <  1:234166/128‑1
                                                                                  ATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCAT‑‑TATATATATATATATATATAATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGT                                                                 >  1:18595/1‑128
                                                                                   TAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCAT‑‑TATATATATATATATATATAATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGTTG                                                                >  2:1492507/1‑128
                                                                                   TAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCAT‑‑TATATATAAATATATATAAATAATGTATGTTATATATTTTTTGAATCTTATGTAACAAGTATTTTATTTATTAATAAGttttgtt                                                              >  2:1320052/1‑121
                                                                                    aaaattTTGCTATTATAACATATTTTTATTTAAATATTGAAT‑‑TATATATATATATATATATAATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGT                                                               <  2:167118/122‑1
                                                                                            GCTATTATACCATATTTTCATTTACATATTGCAT‑‑TATATATATATATATATATAATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATG                                                       >  2:874883/1‑128
                                                                                            GCTATTATACCATATTTTCATTTACATATTGCAT‑‑‑‑TATATATATATATATATAATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAA                                                     >  2:741988/1‑128
                                                                                             CTATTATACCATATTTTCATTTACATATTGCAT‑‑TATATATATATATATATATAATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGA                                                      >  2:38840/1‑128
                                                                                              TATTATACCATATTTTCATTTACATATTGCAT‑‑TATATATATATATATATATAATGAATGTATGTTATATATGTTTAGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGTTTTGTGTAAAATAAA                                                     >  1:155955/1‑128
                                                                                                TTATACCATATTTTCATTTACATATTGCAT‑‑TATATATATATATATATATAATGAATGTATGTTATATATGTTTTGAATCTTATGTAACAATAATTTTATTTTTTAATAAGTGTTGTGTAAAATGAAAA                                                   >  2:1527088/1‑128
                                                                                                TTATACCATATTTTCATATAGATATTGCAT‑‑‑‑TATATATATATATATATAATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAG                                                 <  2:1046319/128‑1
                                                                                                 TATACCATATTTTCATTTACATATTGCAT‑‑‑‑TATATATATATATATATAATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGT                                                <  1:1496491/128‑1
                                                                                                   TACCATATTTTCATTTACATATTGCAT‑‑TATATATATATATATATATAATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGTGTGTGTAAAATGAAAAAGT                                                >  1:1186901/1‑128
                                                                                                   TACCATATTTTCATTTACATATTGCAT‑‑TATATATATATATATATATAATGAATGTATGTTATATATGTTTTGAATATTATGTAAAAAGTATTATATTTTTTAATAATTTTTTTGTAAAATGATAAAtt                                                >  2:840556/1‑126
                                                                                                          TTTTCATTTACATATTGCAT‑‑‑‑TATATATATATATATATAATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAA                                       >  2:540039/1‑128
                                                                                                           TTTGATTTACATATTGCAT‑‑TATATATATATATATATATAATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGGGTGTAAAATGAAAAAGTTAATTACA                                        <  2:1717535/128‑1
                                                                                                           TTTCATTTACATATTGCAT‑‑TATATATATATATATATATAATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACA                                        <  2:426239/128‑1
                                                                                                               ATTTACATATTGCAT‑‑TATATATATATATATATATAATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATTT                                    <  1:1364372/128‑1
                                                                                                                TTTACATATTGCAT‑‑‑‑TATATATATATATATATAATGAATGTATGTTATATATGTTTTGAATCGTATTTAACAAGTATTTTATTTTTTAATAAGGTGTGTGTAAAATGAAAAAGTTAATTACAATTTTAA                                 >  1:1693519/1‑128
                                                                                                                 TTACATATTGCAT‑‑TTTATATATATATATATAATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAG                                <  1:983329/128‑1
                                                                                                                   ACATATTGTAT‑‑TATATATATATATATATATAATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAG                                <  1:1806735/128‑1
                                                                                                                   ACATATTGCAT‑‑TATATATATATATATATATAATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAATTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAG                                >  2:296110/1‑128
                                                                                                                    CATATTGCAT‑‑‑‑TATATATATATATATATAATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAATTATTTTATTTTTTAATAATGGGTGTGTAAAATTAAAAATTTAATTAAAATTTTAATTTC                             >  1:730384/1‑128
                                                                                                                            AT‑‑TATATATATATATATATATAATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAGTTCATTTGG                       >  1:1431348/1‑128
                                                                                                                                TATATATATATATATATATAATGAATGTATGTTATATTTGTTTTGAATCTTATGTAACAAGTATTTTATTTTTTTATATGGGGTGTTTAATATGAAAAAGTTAATTACAATTTTAAGTTAATTTGttt                     >  2:1227914/1‑125
                                                                                                                                 tTATATATATATATATATAATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAGTTCATTTGGATT                    <  1:428005/127‑1
                                                                                                                                  TATATATATATATATATAATGTATGTATGTTATATATGTTTTGTATCGTATGTAACAAGTACTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAGTTCATTTGGATTA                   <  1:171153/128‑1
                                                                                                                                   ATATATATATATATATAATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAGTTCATTTGGATTAG                  <  2:1503324/128‑1
                                                                                                                                     ATATATATATATATAATGAATGTATGTTATATATGTTTTGTATATTATTTAAAAAGTATTTTATTTTTTAATTAGGGGTGTGTAAAATTAAAAATTTAATTACAATTATATGTTAATTTGTATTAGTT                >  2:569992/1‑128
                                                                                                                                     ATATATATATATATAATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAGTTCATTTGGATTAGTT                <  1:339009/128‑1
                                                                                                                                     ATATATATATATATAATGAATGTATGTTATATATGTTTTGAATAGTATGTAACAAGTATTTTATTTTTTAATAAGTGGTGTGTAAATTTAAAAAGTTAAATAATATTTTAATTTAATTTGTATTAGTT                >  1:1018383/1‑128
                                                                                                                                      TATATATATATATAATGAATGTATGTTATATATGTTTTTAATCGTATGTAACAAATATTTTATTTTTTAATAATGTGTGTGTAAAATTAAAATGTTTATTACAATTTTAAGTTCTTTTTGATTAGTTt               >  1:1090809/1‑127
                                                                                                                                      TATATATATATATAATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAAT                                      <  2:1614801/105‑1
                                                                                                                                        TATATATATATAATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAATTTAATTACAATTTTAAGTTCATTTGTATTAGTTATT             >  1:1849339/1‑128
                                                                                                                                           ATATATATAATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAGTTCATTTGGATTAGTTATTACA          <  2:1936580/128‑1
                                                                                                                                           ATATATATAATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAGTTCATTTGGATTAGTTATTACA          >  1:322605/1‑128
                                                                                                                                           ATATATATAATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAGTTCATTTGGATTAGTTATTACA          <  2:1367839/128‑1
                                                                                                                                            TATATATAATGAATGTATGTTATATATGTTTTGAATCGTATGTAACTAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACATTTTTAAGTTCATTTGGTTTAGTTATTACAA         <  2:1059132/128‑1
                                                                                                                                             ATATATAATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAGTTCATTTGGATTAGTTATTACAAC        >  2:779332/1‑128
                                                                                                                                              ttTATATTGAATTTATTTTATATATGTTTTGAATAGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTTCAATTTTAAGTTCATTTGGATTAGTTATTACAACT       <  2:588871/126‑1
                                                                                                                                                 ATAATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAGTTCATTTGGATTAGTTATTACAACTGGT    <  1:1380266/128‑1
                                                                                                                                                 ATAATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAGTTCATTTGGATTAGTTATTACAACTGGT    <  1:1972051/128‑1
                                                                                                                                                 ATAATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAGTTCATTTGGATTAGTTATTACAACTGGT    <  1:652973/128‑1
                                                                                                                                                   AATGAATGTATGTTATATATGTTTTGAATCGTATGTATCAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAGTTCATTTGGATTAGTTATTACAACTGGTAC  <  2:1561801/128‑1
                                                                                                                                                   AATGAATGTATCTTATATATGGTTTGAATCGTATGTAAAAAGTATTTTATTTTTTAATAAGGTGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAGTTCATTTGGATTAGTTATTACAACTGGTAC  <  1:125830/128‑1
                                                                                                                                                                                                                                                                                   
TAATAATTTTTCAAATTACTTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCAT‑‑TATATATATATATATATATA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP016816/311299‑311155
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tatatatatatatatatataATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAGTTCATTTGGATTAGTTATTACAACTGGTAC  <  CP016816/311148‑311022

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.