New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 311155 =347 (0.380)167 (0.220) 106/210 13.8 38.7% intergenic (‑78/‑236) JCVSYN2_01300/JCVSYN2_01305 hypothetical protein/30S ribosomal protein S21
?CP016816 = 311148 238 (0.310)intergenic (‑71/‑243) JCVSYN2_01300/JCVSYN2_01305 hypothetical protein/30S ribosomal protein S21
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 441 total aligned reads displayed.

TGTACCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑TATATATATATATATATATA‑‑TATAT‑‑AAT‑‑‑GCAATATGTAAAT‑‑GAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTT  >  CP016816/311021‑311274
                                                                                                                                 |                                                                                                                                            
tGTACCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATAcattca‑‑t                                                                                                                                              >  2:681361/1‑128 (MQ=255)
 gTACCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAAGATAcattca‑‑t‑‑‑‑t                                                                                                                                         >  1:808298/1‑128 (MQ=255)
  tACCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑ta                                                                                                                                        >  1:418788/1‑128 (MQ=255)
   aCCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACAAACATTCA‑‑T‑‑‑‑tat                                                                                                                                       >  2:1946776/1‑128 (MQ=255)
       gTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑tatatat                                                                                                                                   <  2:779332/128‑1 (MQ=255)
         tGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑tatatatat                                                                                                                                 <  1:322605/128‑1 (MQ=255)
           taataaCTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑tatatatatat                                                                                                                               >  2:155955/1‑128 (MQ=255)
            aataaCTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACACCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑tatatatatata                                                                                                                              <  2:277030/128‑1 (MQ=255)
                aatAATACAAATGTAATTAAAATTGTAATTAAATTTTTAATTTTACAAACACATTATTAAAAAATAAAATAATTTTTAAATATTATTCAAAAAATATATAACATACATTCA‑‑T‑‑‑‑tttatatatatatata                                                                                                                          <  1:126537/126‑1 (MQ=255)
                aCTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑tatatatatatatata                                                                                                                          >  2:61803/1‑128 (MQ=255)
                  tAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGAATCAAAACATATAAAACATACATTCA‑‑T‑‑‑‑tatatttatatatatata                                                                                                                        >  1:1677042/1‑128 (MQ=255)
                  tAATCCAAACGAACATAAAATTTTAATTAACTATTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑tatatatatatatatata                                                                                                                        <  2:1407955/128‑1 (MQ=255)
                     tCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTTAAAAATAAAATACTTGTTACATACGATTCAAAACATATATATCATACATTAA‑‑T‑‑‑‑tatatatatatatatatata‑‑t                                                                                                                   >  2:1736782/1‑128 (MQ=255)
                     tCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACTATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑tatatatatatatatatataa                                                                                                                     >  1:442294/1‑127 (MQ=255)
                     tCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑tatatatatatatatatataa                                                                                                                     >  1:1969880/1‑127 (MQ=255)
                     tCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑tatatatatatatatatata‑‑t                                                                                                                   >  1:468544/1‑128 (MQ=255)
                      ccAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑tatatatatatatatatata‑‑ta                                                                                                                  >  2:49994/1‑128 (MQ=255)
                      acAAATTAAATAAAAATTTTAATTATATTTTTAATTTTAAACACACCTTAATAAAAAATAAAATACTTGTTATATACTATACAAAACATATATAACATACATTAA‑‑T‑‑‑‑tatatatatatatatatata‑‑ta                                                                                                                  <  1:1724182/127‑1 (MQ=255)
                       cAAATTAAATTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTAATAAAAAATAAAAAACTTGTTACATACGATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑tatatatatatataatgaatgta                                                                                                                   <  2:34199/128‑10 (MQ=255)
                         aaTGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑tatatatatatatatatata‑‑tatat                                                                                                               >  1:1353628/1‑128 (MQ=255)
                         aaTGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑tatatatatatatatatata‑‑tatat                                                                                                               >  2:712043/1‑128 (MQ=255)
                           tGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑tatatatatatatatata                                                                                                                        <  2:579892/119‑1 (MQ=255)
                            taaataaaaaTTTTAATTAACATTTTCATTTAACACAAACAATATTAAAAAATAAAATACTTTTTACATACTATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑tatatatatatatatatata‑‑tatat‑‑ata                                                                                                          <  2:290264/122‑3 (MQ=255)
                             taCTTAAAATTGTAATTAACTTTTTCATTGTACACACACCTTATTAAAATATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑tatatatatatatatataatgaatgtatg                                                                                                             <  1:739320/127‑12 (MQ=255)
                              aCTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑tatatatatatatatatata‑‑taatgcaata                                                                                                          >  2:894344/1‑120 (MQ=255)
                              aCTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑TATATAAATATATATATATA‑‑TATAT‑‑aaatc                                                                                                       >  1:779983/1‑125 (MQ=255)
                                 tAAAAATTTAATTAACTTTTTCATTATACAAACACCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATAAAACATACATTCA‑‑T‑‑‑‑tatatatatatatatatata‑‑taatgcaatatgt                                                                                                       <  1:546167/128‑12 (MQ=255)
                                   aaaTTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑TATATATATATATATATATA‑‑TATAT‑‑AAT‑‑‑GCAatat                                                                                               >  2:1246270/1‑128 (MQ=255)
                                    aaTTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑TATATATATATATATATATA‑‑TATAT‑‑aaaaacaaaaa                                                                                                 >  2:186956/1‑119 (MQ=255)
                                    aaTTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑TATATATATATATATATATA‑‑TAAT‑‑AT‑‑‑TCAATATGTa                                                                                            >  1:258486/1‑128 (MQ=255)
                                     aTTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑tatatatatatatatatata‑‑tatat‑‑atataaatcaat                                                                                                 >  2:1963950/1‑117 (MQ=255)
                                              aaatttttatttttaAACACAATTTATTAAAAAATAAAATAATTTTTATATAATATTAAAAAAATATATAAAATAAATTTA‑‑TTATATATATATATATATATATATA‑‑TATAT‑‑AAT‑‑‑GCAATATGTAAAT‑‑g                                                                                      <  1:1980230/125‑1 (MQ=255)
                                              aaCTTTTTAATATTACACACCCAATATTAAAAAATAAAATACTTGTTACATACTCTTCAAAACATATATAACATACAATCA‑‑TTA‑‑TATATATATATATATATATA‑‑TATAT‑‑AAT‑‑‑GCAATATGTAAAT‑‑Gaa                                                                                    <  1:826827/128‑1 (MQ=255)
                                               aatttatCATTTTACAAAAAAATTATTAAAAAATATAATACTTTTTACATAATATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑‑‑‑‑‑‑TATATATATATATA‑‑TATAT‑‑AAT‑‑‑GCAATATGTAAAT‑‑GAAAATATGGta                                                                           <  2:840556/126‑1 (MQ=255)
                                               aCTTTTTCATTTTACACACACCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑‑‑‑‑‑‑TATATATATATATA‑‑TATAT‑‑AAT‑‑‑GCAATATGTAAAT‑‑GAAAATATGGta                                                                           <  1:1186901/128‑1 (MQ=255)
                                                    ttCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑‑‑‑‑‑‑TATATATATATATA‑‑TATAT‑‑AAT‑‑‑GCAATATGTAAAT‑‑GAAAATATGGTataata                                                                      >  2:18595/1‑128 (MQ=255)
                                                       aTTTTACACACACCTTATTAAAAAATAAAATACTTGTTAAATACTATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑‑‑TATATATATATATATATA‑‑TATAT‑‑AAT‑‑‑GCAATATGTAAAT‑‑GAAAATATGGTataat                                                                       <  2:1786679/128‑1 (MQ=255)
                                                         tttACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCA‑‑TTA‑‑TATATATATATATATATATA‑‑TATAT‑‑AAT‑‑‑GCAATATTTAAAT‑‑TAAAATATGTtata                                                                         >  1:1074348/1‑128 (MQ=255)
                                                          ttACACACCCCTTAATAAAAAATAAAAATCTTGTTACATATGATTCAAAACATATATAACATAAATTCA‑‑TTA‑‑TATATATATATATATATATA‑‑TATAT‑‑AAT‑‑‑GCAATATGTAAAT‑‑GAAAATATGGTataa                                                                        <  1:387502/128‑1 (MQ=255)
                                                           tatacactagatatttAAAAATATAATATTTTTTTTATAATATTTAAAAAATATATAACATACATTAA‑‑TTATATATATATATATATATATATA‑‑TATAT‑‑AAT‑‑‑GCAATATGTAAAT‑‑GAAAATATGGtata                                                                         <  2:455787/117‑1 (MQ=16)
                                                           tACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCA‑‑TTATATATATATATATATATATATA‑‑TATAT‑‑AAT‑‑‑TCAATATATAAAT‑‑GAAAATATtatata                                                                         >  2:1882759/1‑128 (MQ=255)
                                                             cacacCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCA‑‑TTATATATATATATATATATATATA‑‑TATAT‑‑AAT‑‑‑GAAATATGTAAAT‑‑GAATATATGGTataat                                                                       >  1:1206292/1‑128 (MQ=38)
                                                             cacacCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑TATATATATATATATATATA‑‑T‑‑‑‑‑‑T‑‑‑GCAATATTTAAAT‑‑TAAAATATGTTATAATAGAAACAGtt                                                             >  2:1526954/1‑128 (MQ=255)
                                                                acCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑TATATATATATATATATATA‑‑TATAA‑‑AAT‑‑‑GCAATATATAAAT‑‑TAAAATATGATATAATAGAAAcc                                                                >  1:1491053/1‑128 (MQ=255)
                                                                   acTTATTAAAAAATAAAATAATTTTTAAATAATATTAAAAAAATATATATAATAAATTAA‑‑TTATATATATATATATATATATATA‑‑TATAT‑‑AAT‑‑‑GCAATATGTAAAT‑‑GAAAATATGGTATAATAGCAAc                                                                 <  1:683550/127‑1 (MQ=19)
                                                                     ttattaAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCA‑‑TTA‑‑TATATATATATATATATATA‑‑TATAT‑‑AAT‑‑‑TCAATATGTAAAT‑‑GAAAATATGGTATAATATCAACAGtt                                                             >  1:1415158/1‑128 (MQ=255)
                                                                     ttattaAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑‑‑‑‑‑‑TATATATATATATA‑‑TATAT‑‑AAT‑‑‑GCAATATGTAAAT‑‑GAAAATATGGTATAATAGCAAGCGTATATAAAGt                                                     >  2:544594/1‑128 (MQ=255)
                                                                     ttattaAAAAATAAAATACTTGTTAAATAAGATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑‑‑‑‑‑‑TATATATATATATA‑‑TATAT‑‑AAT‑‑‑GCAATATGTAAAT‑‑GAAAATATGGTATAATAGCAACCGTTTATAAAGt                                                     <  2:1626059/128‑1 (MQ=255)
                                                                      tattaAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑TATATATATATATATATATA‑‑TATAT‑‑AAT‑‑‑TCAATATGTAAAT‑‑TAAAATATTGTATAATATAAACCTTTtat                                                          >  2:327945/1‑128 (MQ=39)
                                                                      tattaAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑TATATATATATATATATATA‑‑TATAT‑‑AAT‑‑‑GCAATATGTAAAT‑‑GAAAATATTGTATAATATCaaaagtatat                                                          >  2:1106760/1‑120 (MQ=39)
                                                                      tattaAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑‑‑‑‑‑‑TATATATATATATA‑‑TATAT‑‑AAT‑‑‑GCAATATGTAAAT‑‑GAAAATATTGTATAATAGCAAACTTTTATAAAGTa                                                    >  2:1334273/1‑128 (MQ=255)
                                                                      tattaAAAAATAAAATAATTTTTAAATAAGATTCAAAAAATATATAAAATAAATTCA‑‑T‑‑‑‑TATATATATATATATATATA‑‑TATAT‑‑AAT‑‑‑GCAATATGTAAAT‑‑GAAAATATGGTATAATAGCAACCGTTtat                                                          <  2:1683473/128‑1 (MQ=38)
                                                                        ttaAAAAATAAAATACTTTTTACATAAGATTAAAAAAATATATAAGATAAATTAA‑‑TTATATATATATATATATATATATA‑‑TATAT‑‑AAT‑‑‑GCAATATGTAAAT‑‑GAAAATATGGTATAATAGCAACCGttt                                                            <  1:1003182/128‑1 (MQ=25)
                                                                         taaaatataaaataCTTGTTACATAAGATTCAAAACATATATAACATAAATTCA‑‑T‑‑‑‑‑‑TATATATATATATATATA‑‑TATAT‑‑AAT‑‑‑GCAATATGTAAAT‑‑GAAAATATGGTATAATAGCAACCGTTTATAAAGt                                                     <  2:198647/128‑1 (MQ=255)
                                                                         taAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑TATATATATATATATATATA‑‑TATAT‑‑ATATAAATAAATATATAAAT‑‑TAAAATATTATATAATAGCacaatttta                                                           >  1:1838795/1‑120 (MQ=255)
                                                                            aaaataaaatACTAGTTACATACGATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑‑‑‑‑‑‑TATATATATATATA‑‑TATAT‑‑AAT‑‑‑GCAATATGTAAAT‑‑GAAAATATAGTATAATAGCAACCGTATATAAATaaaaaaaa                                              >  2:1009399/1‑128 (MQ=255)
                                                                              aataaaataCTTGTTACATACGATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑TATATATATATATATATATA‑‑TCAA‑‑AAT‑‑‑‑‑AAT‑‑‑TATAT‑‑AAAAATATGATATAATAGACACAGTTTATATAATAAAAAtata                                            >  2:1464630/1‑128 (MQ=255)
                                                                               ataaattaTTTGTTAAATAATTTTTAAAAAATATATAAAATATATTAA‑‑T‑‑‑‑TATATATATATATATATATATTTATAT‑‑AAT‑‑‑GAAATATTTAAAT‑‑TAAAATATTTTATAATAGCAAACGTTTATAAATTaa                                                   <  2:1818893/128‑1 (MQ=255)
                                                                               ataaaataCTTGTTACATACGATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑TATATATATATATATATATA‑‑TATAT‑‑ATATTAATAAATATATAAAT‑‑TAAAATATTTTATAATAGAAACCTTTTATaaaat                                                     >  1:864743/1‑126 (MQ=255)
                                                                                taaaataATTGTTAAATAAGATTTAAAACATATATAAAATACATT‑‑‑‑T‑‑‑‑T‑‑‑‑‑TTATATATATATA‑‑TATAT‑‑AAT‑‑‑GCAATATGTAAAT‑‑GAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTaa                                        <  1:1139081/128‑1 (MQ=255)
                                                                                  taataTTTGTTAAATAAGATTAAAAACATATATAACATACATTCA‑‑T‑‑‑‑TATATATATATATATATATA‑‑TATAT‑‑AAT‑‑‑GCAATATGTAAAT‑‑GAAAATATGGTATAATAGCAACCGTTTATAAAGTaaaaaaa                                              <  2:818721/127‑1 (MQ=39)
                                                                                  aaataCTTGTTACATACGATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑‑‑‑‑‑‑‑‑TATATATATATA‑‑TATAT‑‑AAT‑‑‑GCAATATGTAAAT‑‑GAAAATATGGTATAATATCAACCGTTTATAAAGTAAAAAAATAGAAAat                                      >  1:1055589/1‑128 (MQ=255)
                                                                                     taCTTGTTACATACGATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑‑‑‑‑‑‑TATATATATATATA‑‑TATAT‑‑AAT‑‑‑GCAATATGTAAAT‑‑GAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAata                                     <  1:61803/128‑1 (MQ=255)
                                                                                     taCTTGTTACATACGATTCAAAAAATATATAACATACATTCA‑‑T‑‑‑‑‑‑‑‑TATATATATATATATA‑‑TATAT‑‑AAT‑‑‑GCAATATGTAAAT‑‑GAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTaaa                                       <  1:1095298/128‑1 (MQ=255)
                                                                                      aCTTGTTACATACGATTCAAAACATATATAACATAAGTTCA‑‑T‑‑‑‑‑‑‑‑‑‑TATATATATATATA‑‑TATAT‑‑AAT‑‑‑GCAATATGTAAAT‑‑GAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAatat                                    <  2:1497163/128‑1 (MQ=255)
                                                                                       cTTGTTACATACGATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑TATATATATATATATATATA‑‑TATAT‑‑ATATAAATAAATATATAAAT‑‑AAAAATATTGTAAAATAGAAAACGTATATAAATAAAAAAAAt                                             >  1:1235188/1‑128 (MQ=255)
                                                                                        ttGTTACATACGATTCAAAACATATATAACATACATTCA‑‑TTATATATATATATATATATATATA‑‑TATAT‑‑AAT‑‑‑TAAATATTTAAAT‑‑TAAAATATTTTATAATAGATAAATTTTATAAATAAAAAAAATa                                            >  2:557147/1‑128 (MQ=19)
                                                                                        ttGTTACATACGATTCAAAACATATATAACATACATTCA‑‑TTA‑‑TATATATATATATATATATA‑‑TATAT‑‑AAT‑‑‑GCAATATGTAAAT‑‑GAAAATATTGTATAATATAAACATTTTATAAAGTAAAAAAATAGt                                          >  2:1081508/1‑128 (MQ=255)
                                                                                        ttGTTACATACGATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑TATATATATATATATATATA‑‑TATATAAAAT‑‑‑TAAATATATATAT‑‑TAATATATTGTATTATATAAAAATTTTATAAATTAAAAAAATatt                                          >  2:1207280/1‑126 (MQ=255)
                                                                                         tGTTACATACGATTCAAAACATATATAACATACATTCA‑‑TTA‑‑TATATATATATATATATATA‑‑TATAT‑‑AAA‑‑‑GAAATATTTAAAT‑‑AAAAATATTTTATAATAGAAACATATTATAAATAAAAAAAATATTa                                         >  2:138104/1‑128 (MQ=255)
                                                                                         tGTTACATACGATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑TATATATATATATATATATATTTATAA‑‑AAT‑‑‑TCTATATGTAAAT‑‑TAAAATATTGTATAATATCAAACTTTTATAAATTAAAataataata                                         >  1:1442129/1‑128 (MQ=255)
                                                                                          gtttaaTACGATTAAAAAAATATATAACATACATTTT‑‑TTA‑‑TATATATATATATATATATA‑‑TATAT‑‑AAT‑‑‑GCAATATGTAAAT‑‑GAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTaa                                        <  1:1936580/123‑1 (MQ=255)
                                                                                           ttACATACGATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑‑‑‑‑‑‑TATATATATATATA‑‑TATAT‑‑AAT‑‑‑GCAATATGTAAAT‑‑GAAAATATGGTATAATAGCAACAGTTTATAAAGTAAAAAAATAGTAAATAtactac                               >  1:1855137/1‑128 (MQ=255)
                                                                                            tACATACGATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑‑‑‑‑‑‑TATATATATATATA‑‑TATAT‑‑AAT‑‑‑GCAATATTTAAAT‑‑GAAAATATGGTATAATATAAACAGTTTATAAAGTAAAAAAATAGTAAATAtactaat                              >  1:711836/1‑126 (MQ=255)
                                                                                            tACATACGATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑‑‑‑‑‑‑TATATATATATATA‑‑TATAT‑‑AAT‑‑‑GCAATATGTAAAT‑‑GAAAATATTGTATAATAGAAACAGTTTATAAAGAAAAAAAATATTAAATATactact                              >  2:960758/1‑128 (MQ=255)
                                                                                              tataatttaaaaaaTATATATAAAATATATTAT‑‑TTA‑‑TATATATATATATATATATA‑‑TATAT‑‑AAT‑‑‑GCAATATGTAAAT‑‑GAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAatat                                    <  1:589952/118‑1 (MQ=255)
                                                                                              cATACGATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑TATATATATATATATATATA‑‑‑‑‑AT‑‑A‑‑‑‑‑CAATATTTAAAA‑‑GAAAATATGATATAATATCAACAGTTTATAAATTAAAAAAATAGAAAATAAACTAGTTa                            >  2:1288876/1‑128 (MQ=255)
                                                                                              cATACGATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑TATATATATATATATATA‑‑‑‑‑‑‑A‑‑AAT‑‑‑GCAATATGTAAAT‑‑TAAAATATTTTATAATAGCAAAAGTTTATAAAATAAAAAAATAATAAATATACAACTTa                            >  1:1323636/1‑128 (MQ=255)
                                                                                              cATAAGATTAAAAACATATATAACATACATTCA‑‑T‑‑‑‑‑‑‑‑‑‑TATATATATATATA‑‑TATAT‑‑AAT‑‑‑GCAATATGTAAAT‑‑GAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTa                            <  2:1697872/128‑1 (MQ=255)
                                                                                               aTACGATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑AATATATATAAATATATATA‑‑AATAA‑‑AAA‑‑‑ATAATATATAAATAAGAAAATATGGTATAATAGAAACACTATAAAAAGTAAAAAAATaaaaaaaaat                                   >  1:505800/1‑119 (MQ=255)
                                                                                               aTACGATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑‑‑‑‑‑‑TATATATATATATA‑‑TATAT‑‑AAT‑‑‑GCAATATGTAAAT‑‑GAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTAt                           >  1:1597368/1‑128 (MQ=255)
                                                                                                  cGATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑‑‑‑‑‑‑TATATATATATATA‑‑TATAT‑‑AAT‑‑‑GCAATATGTAAAT‑‑GAAAATATGTTATAATAGCAACATTTTATAAAGTAAAAAAATATTAAATATACTACTTATTTa                        >  2:1312483/1‑128 (MQ=255)
                                                                                                   tattaataaCATATATAACATACATTAA‑‑TTA‑‑TATATATATATATATATATA‑‑TATAT‑‑AAT‑‑‑GCAATATGTAAAT‑‑GAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATAtactac                               <  1:1173355/121‑1 (MQ=255)
                                                                                                   gATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑TATATATATATATATATATA‑‑TATAT‑‑AAT‑‑‑AAAATATTTAAAA‑‑GAAAATATTTTATAATATAAACATTTTATAAAATAAAAAAATAGTAAAtataaaaaat                             >  1:1955944/1‑122 (MQ=25)
                                                                                                     ttCAAAACATATATAACATACATTCA‑‑T‑‑‑‑TATATATATATATATATATA‑‑TATAT‑‑AAA‑‑‑GCAATATTTAAAA‑‑TAAAATATGTTATAATAGCAAACTTTTATAAAGTAAAAAAATATTAAATATAATACTTAt                           >  1:1304172/1‑128 (MQ=255)
                                                                                                      tCAAAACATATATAACATACATTCA‑‑T‑‑‑‑‑‑‑‑‑‑TATATATATATATA‑‑TATAT‑‑AAT‑‑‑GCAATATGTAAAT‑‑GAAAATATGGTATAATATCAACAGTTTATAAAGTAAAAAAATAGTAAATATACAACTTATTTACtaa                    >  1:573459/1‑128 (MQ=255)
                                                                                                       cAAAACATATATAACATACATTCA‑‑T‑‑‑‑TATATATATATATATATATA‑‑TATAA‑‑AAT‑‑‑TAAATATTTAAAT‑‑AAAAATAATATATAATATAAACCTTATATAAAGTAAAAAAATACTAAATAAACAACTTAtaa                         >  1:1382681/1‑126 (MQ=255)
                                                                                                        aaaaCATATATAACATACATTCA‑‑TTA‑‑TATATATATATATATATATA‑‑TATAT‑‑AAT‑‑‑GCAATATGTAAAT‑‑GAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTAtt                          >  2:39157/1‑128 (MQ=255)
                                                                                                         aaaCATATATAACATACATTCA‑‑TTA‑‑TATATATATATATATATATA‑‑TATAT‑‑AAA‑‑‑TAAATATATAAAA‑‑TAAAATATATTATAATATAAACAGTTTATATAATAAAAAAATATTAAATATAATATTAtttt                        >  2:1595931/1‑127 (MQ=255)
                                                                                                           aCATATATAACATACATTCA‑‑TTA‑‑TATATATATATATATATATA‑‑TATAT‑‑AAA‑‑‑TCAATATTTAAAT‑‑AAAAATATTTTATAATAGAAAAAGTTTATAAAGTAAAAaaatataaaatataaaaataatataa                       >  1:1518992/1‑116 (MQ=255)
                                                                                                            cATATATAACATACATTCA‑‑T‑‑‑‑‑‑‑‑TATATATATATATATA‑‑TATAT‑‑AAT‑‑‑GAAATATGTAAAT‑‑GAAAATATGGTATAATATCAAACGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATaaa                >  2:1173314/1‑128 (MQ=255)
                                                                                                              tatataACATACATTCA‑‑TTA‑‑TATATATATATATATATATA‑‑TATAT‑‑AAT‑‑‑GCAATATGTAAAT‑‑GAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACtaa                    >  2:1913999/1‑128 (MQ=255)
                                                                                                              tatataACATACATTCA‑‑T‑‑‑‑TATATATATATATATATATA‑‑TATAT‑‑AAT‑‑‑GCAATATTTAAAT‑‑GAAAATAATGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACtaata                  >  1:1622786/1‑128 (MQ=255)
                                                                                                              tatataAAATATATTTATTT‑‑‑‑TATATATATATATATATATA‑‑TATAT‑‑AAT‑‑‑GCAATATGTAAAT‑‑GAAAATATGGTATAATAGCTACCGTTTTTAAAGTAAAAAAATAGTAAATATACTACTTATTTACtaa                    <  1:1561801/128‑1 (MQ=255)
                                                                                                               atataACATACATTCA‑‑TTATATATATATATATATATATATA‑‑TATAT‑‑AAT‑‑‑GCAATATTTAAAT‑‑TAAAATATTTTATAATAGACACCGTTTATAAAGTAAAAAAATATTAAATATAAAACTTTTTTAAta                     >  1:1799598/1‑128 (MQ=255)
                                                                                                               atataACATACATTCA‑‑T‑‑‑‑TATATATATATATATATATA‑‑TATAT‑‑ATATAAATCAATATTTAAAT‑‑TAAAATATTTTATAATATCAAACTTTTATAAAGTAAAAAAATAATAAATATACTAATTATTTAAta                     >  2:1184865/1‑128 (MQ=255)
                                                                                                                 ataACATACATTCA‑‑TTA‑‑TATATATATATATATATATA‑‑TATAT‑‑AAT‑‑‑GCAATATGTAAAT‑‑GAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACtaataa                 <  2:753462/128‑1 (MQ=255)
                                                                                                                 ataACATACATTCA‑‑T‑‑‑‑TATATATATATATATATATA‑‑TATAT‑‑AAT‑‑‑GCAATATGTAAAT‑‑GAAAATATTGTATAATATCAACCGTTTATAAAGTAAAAAAATAATAAATATACTACTTATTTACAAATaaaa               >  1:1766502/1‑128 (MQ=255)
                                                                                                                  taACATACATTCA‑‑T‑‑‑‑TATATATATATATATATATA‑‑TA‑‑‑‑‑AAT‑‑‑CTATATTTAAAA‑‑AAAAATATTATATAATAGCAACATTATATAAAAAAAAAAAATATTAAATAAAAAAATTATATAATTATAAAAtattt          >  1:937774/1‑124 (MQ=255)
                                                                                                                     catacatTCA‑‑TTA‑‑TATATATATATATATATATA‑‑TATAT‑‑AAT‑‑‑GCAATATGTAAAT‑‑GAAAATATGTTATAATAGCAACAGTTTATAAATTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATc             >  1:852381/1‑128 (MQ=255)
                                                                                                                                 |                                                                                                                                            
TGTACCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCA‑‑T‑‑‑‑TATATATATATATATATATA‑‑TATAT‑‑AAT‑‑‑GCAATATGTAAAT‑‑GAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTT  >  CP016816/311021‑311274

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.