New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 87906 =2618 (0.830)319 (0.110) 141/226 27.3 12.2% intergenic (+33/‑827) JCVSYN2_00345/JCVSYN2_00350 hypothetical protein/50S ribosomal protein L31
?CP016816 = 87902 2209 (0.780)intergenic (+29/‑831) JCVSYN2_00345/JCVSYN2_00350 hypothetical protein/50S ribosomal protein L31
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 2943 total aligned reads displayed.

TGTAACAAAAGTGGTTATTGAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCATTTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACTATTTACCTTTCTTTAGGTAACTAATTAATTACCTAATATTATTTTAGTTC  >  CP016816/87778‑88033
                                                                                                                                |                                                                                                                               
     cataaGTGGCTATGGAGTTTCAAGTAAATTTAAAATTGATAATAAAATTGATATTCATGGTAAGTGAAATGTATATTTAGATTTTGATAATCTGATTTAAATTGATTATTAAAAAATCCAtttttttt                                                                                                                             <  2:510467/125‑1 (MQ=255)
     cAAAAGGGGTTATTGAGTTGCAATTAAACTTCAAATTTATAATAAAAATTATATTCATGGAAATTCAAATTAATATTTATATTTTGAAAAGCGTATTTAAATGGATTATTAAACAATCCAtttttttt                                                                                                                             <  1:3814928/128‑1 (MQ=255)
      aaaaGTGGTTATTGAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCAttttttttt                                                                                                                            >  2:5597118/1‑128 (MQ=255)
       aaaGTGGTTATTGAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCAtttttttttt                                                                                                                           >  2:6731144/1‑128 (MQ=255)
         aGTGGTTTTTTTGTTGCAATTAAATTTAAAATTGATAATAAAATTTATATTCATTGAAAGTCAAATTAATATTTATATTTTTAATAGCTGATTTAAATGGATTATTAAACAATCCAtttttttttttt                                                                                                                         <  1:6609605/128‑1 (MQ=255)
         aGTGGTTATTGAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCAtttttttttttt                                                                                                                         >  2:2466224/1‑128 (MQ=255)
          gTGGTTATTTATTTGCAAGTAAAGTTCAAATTTATAAATAAATTTATATTCATGGAAAGTCAAATGAATATTTATATTTTGAAATGATGATTTAAATGGATTATTAAACAATCCAttttttttttttt                                                                                                                        <  2:1185970/128‑1 (MQ=255)
          gTGGTTATTGAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCAttttttttttttt                                                                                                                        >  2:4977549/1‑128 (MQ=255)
          gTGGTTATTGAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCAttttttttttttt                                                                                                                        >  2:5478193/1‑128 (MQ=255)
            ggTTATTGAGTTTTAATTTAAGTTTAAATTTATAATAAAATTGTTTTTAATTGAAAGTCAAATGAATATTTTGATTTTTAATATCTGATTTAAATGGATTATTAAAAAATACAtttttttttttttta                                                                                                                      <  2:1798099/128‑2 (MQ=255)
                aTTGAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCAttttttttttttttattaa                                                                                                                  >  2:5222313/1‑123 (MQ=255)
                aTTGAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑TTTTTTTTTTTTTtaataa                                                                                                                 >  1:2517577/1‑128 (MQ=255)
                aTTGAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑TTTTTTTTTTTTTtaataa                                                                                                                 >  1:3711461/1‑128 (MQ=255)
                 ttGAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCATTATTATTTTTTTTtaataa                                                                                                                 >  1:2411131/1‑128 (MQ=255)
                  ttaGTTGCAAGATAAGTTCAAATTGATAATAAATTTTATATTAATGTAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATTGATTATTAAAAAATCCA‑TTTTTTTTTTTTTTAATaaaa                                                                                                               <  1:4665218/126‑1 (MQ=255)
                  tgtgTTTCAATTAAAGTTAAAATTGATAATAAAATTGATTTTTATTGAAAGTAAAATTAATATTTATTTTTTTTATATCTTATTTAAATTGTTTTTTAAAAAATCCA‑TTTTTTTTTTTTTTAATaaaa                                                                                                               <  2:5365737/125‑1 (MQ=255)
                  tGATTTGGAAGTAAAGTTCAAATTGATAATAAAATTGATAATCATGGAAATTCAAATGAATATTTATATTTTTAATATCTGATTTAAATGGATTATTAAACAATACA‑TTTTTTTTTTTTTTAATaaaa                                                                                                               <  1:4317280/128‑1 (MQ=255)
                  tGAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTAATaaaaa                                                                                                              >  1:4164421/1‑128 (MQ=255)
                   gAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGTATTATTAAACAATCCAttttttttttttaaataaaaaa                                                                                                               >  2:1334497/1‑118 (MQ=255)
                   gAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑TTTTTTTTTTTTTTAATaaaaa                                                                                                              >  2:1450316/1‑128 (MQ=255)
                   gAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑TTTTTTTTTTTTTTAATaaaaa                                                                                                              >  1:1492278/1‑128 (MQ=255)
                    aGTTTCAAGTATATTTCAAATTTATAATAAAATTGATATTCATGGAAAGTCAAATGAATATTTAGTTTTTTAATAGCTGATTTAAATGGATTATTAAACAATCCA‑TTTTTTTTTTTTTTAATAAAAAg                                                                                                             <  1:6059516/128‑1 (MQ=255)
                    aGTTGCAAGTAAATTTCAAATTTTTAATAAAATTGATATTAATTGAAATTCAAATTAATATTTTTTTTTTGAATATCTTATTTAAATTGTTTATTAAAAAATACA‑TTTTTTTTTTTTTTAATAAAAAg                                                                                                             <  2:6846914/128‑1 (MQ=255)
                     gTTGCAATTAAAGTTAAAATTTTAAATAAAATTGATATTAATTGAAAGTAAAATTAATTTTTATTTTTTTAATATCTGATTTAAATGGATTATTAAACAATCCA‑TTTTTTTTTTTTTTAATAAAAAGa                                                                                                            <  1:6413712/128‑1 (MQ=255)
                        gCAAGTAAAGTTCAAATTGATAATAAAATTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑TTTTTTTTATTTTTATTAAAAAGACTc                                                                                                         >  1:6500192/1‑128 (MQ=255)
                         cAAGTAAAGTTCAAATTGATAATAAAATTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTAATAAAAAGACTcac                                                                                                       <  1:1131386/128‑1 (MQ=255)
                          aagttaagttAAAATTTATAATAAAATTTTTATTCATGGAAAGTAAAATTAATATTTATATTTTTAATAGCTGATTTAAATTGTTTTTTAAACAAT‑CAATTTTTTTTTTTTTTAATAAAAAGACTcac                                                                                                       <  2:4852635/128‑1 (MQ=255)
                          aaGTAAATTTAAAATTTATAATAAAATTGATATTCATGGAAAGTCAAATTAATATTTATATTTTTAATAGCTGATTTAAATGGATTATTAAAAAATCCA‑TTTTTTTTTTTTTTAATAAAAAGACTcac                                                                                                       <  1:4048103/128‑1 (MQ=255)
                           aGTAAAGTTCAAATTGATAATAAAATTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑TTTTTTTTTTTTTTAATAAAAAGACTcaca                                                                                                      <  1:493192/128‑1 (MQ=255)
                            gTAAAGTTCAAATTGATAATAAAATTGATATTCATGGAAAGTCAAATTAATATTTAGATTTTGAATAGCTGATTTAAATGTATTATTAATCAATCCATTTTTTTTTTTTTTTAATAAAATGACtaaaa                                                                                                      >  1:13076/1‑124 (MQ=255)
                            gTAAAGTTCAAATTGATAATAAAATTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCATTTTTTTTTTTTTTTAATAAAAAGACTcaca                                                                                                      >  1:844813/1‑128 (MQ=255)
                            gTAAAGTTCAAATTGATAATAAAATTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑TTTTTTTTTTTTTTAATAAAAAGACTCACAt                                                                                                     >  2:2397051/1‑128 (MQ=255)
                             tAAAGTTCAAATTGATAATAAAATTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑TTTTTTTTTTTTTTATTAAAAATAATAACATa                                                                                                    >  2:2274089/1‑128 (MQ=255)
                               taGTTCAATTTTTTATTAAAATTTTTATTAATGGAAATTCAAATTAATATTTTGATTTTGATTAGATGATTTTAATGGTTTATTTAAAAATCCA‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAg                                                                                                  <  2:2729947/127‑1 (MQ=255)
                                aGTTCAAATTGATAATAAAATTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACACTCCA‑TTTTTTTTTTTTTTATTAAAAAGACTAACATAAGt                                                                                                 >  1:5783308/1‑128 (MQ=255)
                                  ttCAATTTGATAATAAAATTGATATTCATGTAAAGTCAAATGAATATTTAGAATTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGa                                                                                               <  1:2125737/128‑1 (MQ=255)
                                    taattttataataAATTTGTTATTAATGGTAATTTAAATTAATATTTATATTTTTTATATTTTTTTTTATTTTATTATTAAAAAATACA‑‑TTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTc                                                                                            <  2:39373/121‑1 (MQ=255)
                                    cAAATTGATAATAAAATTGATATTCATGGAAATTCAAATGAATATTTATATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGt                                                                                             <  1:2004159/128‑1 (MQ=255)
                                        atttaaataaAATTTATAATCATTGAAAGTAAAATGAATATTTAGATTTTGAATAGCTGATATAAATGGAATATTAAACAAACCA‑‑TTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAAtt                                                                                        <  1:3197922/123‑1 (MQ=255)
                                         tGATAATAAAATTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCATTTTTTTTTTTTTTTAATAAAAATACTCAAATAAGTTATTCAAt                                                                                         >  2:103831/1‑128 (MQ=255)
                                               taaAATTTATTATAATGTAAAGTTAAATGAAATATTAGTTTTTTAATACATTATTTTATTTGTTTATTAAAAAATAAATTTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGat                                                                                   <  1:2224153/128‑1 (MQ=255)
                                                aaaaTTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAATTGAGTCAATTGCGatta                                                                                 >  1:1382589/1‑128 (MQ=255)
                                                 aaaTTTATATTCATGTAAAGTAAAATTAAATTTTATATTTTGAATAGCTGATTTAAATGGATTATTAAAAAATCCA‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGattat                                                                                <  1:4417619/128‑1 (MQ=255)
                                                   aTTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATtta                                                                             >  2:4085019/1‑128 (MQ=255)
                                                     ttatatTTATGGAAATTCAATTGAATATTTATATTTTGAATATCTTATTTAAATGGATTTTTAAACAATCCA‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATttaa                                                                            <  2:282801/126‑1 (MQ=255)
                                                     tGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAAAAATCCA‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATttaa                                                                            <  1:5920173/128‑1 (MQ=255)
                                                      gATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑TTTTTTTTTTTTTTAATAAAAAGACACACATAATTGATAAAATTGCTATTATttaat                                                                           >  2:3323424/1‑128 (MQ=255)
                                                       ataattaTGGTAATTCAAATGAATATTTATATTTTTAATAGCTGATTTAAATTGATTATTAAAAAAACCA‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATttaatt                                                                          <  1:1833516/122‑1 (MQ=255)
                                                         ttttaTGGAAAGTTAAATGTATATTTATATTTTGAATAGTTGTTTTTAATTGTTTATTAAAAAATCCA‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATttaattat                                                                        <  2:892199/124‑1 (MQ=255)
                                                          ttCATGGTAATTCAAATTAATATTTATATTTTTAATAGCTGATTTAAATTGATTATTAAAAAATCCATTTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATttaattat                                                                        <  1:5502443/128‑1 (MQ=255)
                                                          ttCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑TTTTTTTTTTTTTTAATAAAAATAAACAAATAATTAATTAAATTACTATTATataattatt                                                                       >  1:3100129/1‑128 (MQ=255)
                                                           tCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCATTTTTTTTTTTTTTTAAAAAAAAAAATCAAAAAATATTGTCATTTGCGATAATataattata                                                                       >  2:444434/1‑127 (MQ=255)
                                                           tCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCAATTTTTTTTTTTTTT‑‑ATAAAAATAAACAAATAATTTATTAAATTGCGATTATttaattataaa                                                                     >  1:6751746/1‑128 (MQ=255)
                                                            cATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑TTTTTTTTTTTTTTAATAAAAATAATAACATAATTGAGTCAATTGCGATTATttaattattaa                                                                     >  2:6510328/1‑128 (MQ=255)
                                                            cATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑TTTTTTTTTTTTTTAATAAAAAGACTCAAATAAGTTATGCAATTCCGATTCTttaatttttaa                                                                     >  1:3448968/1‑128 (MQ=255)
                                                             cttgtaatttaaaTGAATTTTTAGATTTTGAATAGCTGATTTAAAAGGATTATTAAACAATCCA‑ATTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATttaattattaat                                                                    <  1:6294781/118‑1 (MQ=255)
                                                             ctGGTAAGTCCAATTAATATTTAGTTTTTGAATTGCTGTTTTAAATTGATTATTAAACAA‑AGAATTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATttaattattaat                                                                    <  2:3454857/127‑1 (MQ=255)
                                                              tgtaaatgaaaaTTAATATTTATATATTGAATAGATTATTTAAATGGTTTATTAAAAAATCCTTTTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATttaattattaat                                                                    <  2:3716701/119‑1 (MQ=255)
                                                                    gTCAAATTATTATTTAGATTTTGAATATCTTATTTAAATTTATTATTAAAAAA‑‑AATATTTTTTTTTTTTTAATAAAAAGACTCACATAATTGAGTCAATTGCGATTATTTAATTATTAATTATTCttt                                                            <  2:2984822/128‑1 (MQ=255)
                                                                        aaTGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑TTTTTTTTTTTTTTAATAAAAAGACTCAAATAAGTTATACAAATGCTATTATTTAATTATTAATAATTCTTtaat                                                         >  1:93915/1‑128 (MQ=255)
                                                                         aTGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTTAGTAAATTGAGATTATTAAATTATTAATTATTCTTttatt                                                        >  2:3090829/1‑127 (MQ=255)
                                                                           gAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑TTTTTTTTTTTTTTAATAAAAATACACACATAAGTTAGAAAATTGCGATTATTTAATTATTAAATATTATTTAATGaa                                                      >  2:1656424/1‑128 (MQ=255)
                                                                           gAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑‑TTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACt                                                    >  1:6853996/1‑128 (MQ=255)
                                                                            tatatttatatttTTAATAGATGATTTAAATTTCTTATTAAATAATACATTTTTTTTTTTTTTTAATAAAAAGACTAAAATAAGTGAGTCAATTGAGATTATTTAATTATTAATTATTCTTTGATGaa                                                      <  1:6194820/127‑1 (MQ=255)
                                                                              tatTTATATTTTGAAAACCTTATTTTATTTTATTATTAAA‑AACTAAATTTTTTTTTTTTATAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACTa                                                   <  2:4706901/128‑1 (MQ=255)
                                                                              tatTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCATTTTTTTTTTTTTTTAATAAAAATAAAAAAAAAAATTATTAAATTACTATTATTTAATTATTATTTATTATTTTATTaaat                                                    >  2:2590735/1‑126 (MQ=255)
                                                                              tatTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑TTTTTTTTTTTTTTAATAAACAGACTCACAAAAGTGATTCAATAGCGATTATTTAATTATAAATTATTATTTCATTAACTa                                                   >  1:479041/1‑128 (MQ=255)
                                                                              tatTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑TTTTTTTTTTTTTTAATAAAAAGAATCAAATAAGTTAGTAAATTGCTATAATTTAATTATTAATTATTATTTTATGAAATa                                                   >  1:454569/1‑128 (MQ=255)
                                                                              tatTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑TTTTTTTTTTTTTTAATAAAAAGAAACACATAATTTAGTAAATTGCGATTATTTAATTATTAATTATTCTTTGATTAACTa                                                   >  2:2196686/1‑128 (MQ=255)
                                                                               ttttATATTATGAATAGTCTTTTTAAATGTTTTATTAAAAAATCCA‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACTAt                                                  <  2:3622543/127‑1 (MQ=255)
                                                                               attttgattttgAATATCTTATTTAAATTGATTATTAAACAAT‑AAATTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACTAt                                                  <  2:622801/128‑1 (MQ=255)
                                                                                tttATATTTTTAATATATTATTTAAATTGATTATTAAAAAATACA‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACTAtt                                                 <  2:455188/128‑1 (MQ=255)
                                                                                  tAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑TTTTTTTTTTTTTTAATAAAAATACTCAAATAATTAATTAAATTGATATTATTAAATTATTAATAATTATTTTATGAAATAATTa                                               >  2:5766039/1‑128 (MQ=255)
                                                                                    gATTTTGAATAGCTGATTTAAATGGATTATTTAACAATCC‑GTTTTTTTTTTTTTTAAAAAAAAGACACCAATAATGTTGTCAATTGCGATTTTTTAAGTATTAATTATTCTTTAAATAACTATTTAcc                                             >  2:4357098/1‑128 (MQ=255)
                                                                                         tGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTATTTATTCTTTTATGAACTTTTTACatttct                                        >  1:3594911/1‑128 (MQ=255)
                                                                                          gAATAGGTGATATAAATGGATTATTAAACAATCCA‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACTATTTACctttctt                                       <  2:5869886/128‑1 (MQ=255)
                                                                                            attttataTTTAAATTGATTATTTAAAAATACA‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACTATTTACCTTTCTTTa                                     <  1:2326438/121‑1 (MQ=255)
                                                                                              aGCTGATTTAAATGGATTATTAAACAATCCA‑TTTTTTTTTTTTTTAATAAAAAAACTCACATAAGTAATTCAATTGAGATTATTTAATTATTAATTATTATTTGATAAAATATTTAAATTTATTTAga                                   >  2:1941725/1‑127 (MQ=255)
                                                                                              aGCTGATTTAAATGGATTATTAAACAATCCA‑TTTTTTTTTTTTTTAATAAAAAAACACACATAAGTGAGTAAATTGCAATTATTAAATTATTAATTATTCTTTTATTAACTATTTACctttattagat                                   >  2:3846695/1‑124 (MQ=255)
                                                                                              aGCTGATTTAAATGGATTATTAAACAATCCA‑TTTTTTTTTTTTTTAAAAAAAATAATAAAATAATTTAAACAATTGCTATTATTTAATTTTTAATTATTATTTTATTAAATATTTACatttcttatgt                                   >  1:5053505/1‑124 (MQ=255)
                                                                                               gCTGATTTAAATGGATTATTAAACAATCCATTTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTTCGATTATTTAATTTTTAATTATTCTTTTATGAACTATTTTCCTTTATTTAgg                                   >  2:1545154/1‑128 (MQ=255)
                                                                                               gCTGATTTAAATGGATTATTAAACAATCCA‑TTTTTTTTTTTTTTAATAAAAATACTAACATAAGTGATAAAATTGGGATTTTTTAATTATTAATTATTATTTTATGAAATTTTTACATTAATTTAgtt                                  >  2:2054812/1‑126 (MQ=255)
                                                                                                    tttAAATGGATTATTAAACAATCCA‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACTATTTACATTTCTTTTTGTAACta                             >  1:277370/1‑128 (MQ=255)
                                                                                                     ttAAATGGATTATTAATCAATAGA‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACTATTTACCTTTCTTTAGGTAACtaa                            <  2:6614308/128‑1 (MQ=255)
                                                                                                        aaTGGATTATTAAACAATCCA‑TTTTTTTTTTTTTTATTAAAAAGACTCAAATATGTTAGTAAATTGCGATTATTTAATTATTAATTATTCTTTTATGAACTATTTACTTTTCTTTAGGTAAGtaatta                         >  1:2654282/1‑128 (MQ=255)
                                                                                                          tGGATTATTAAACAATCCA‑TTTTTTTTTTTTTTAATAAAAAGACTCCAATAAGTGAGTCAATTGAGATTATTTAATTATTAATTATTCTTTGATGAACTATTTAACTTTATTTATGTAAAtaattaat                       >  1:2865082/1‑128 (MQ=255)
                                                                                                               tattaAACAAATCA‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACTATTTACCTTTCTTTAGGTAACTAATTAATTACCt                  <  2:759553/128‑1 (MQ=255)
                                                                                                                  taAAAAATCCA‑‑TTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACTATTTACCTTTCTTTAGGTAACTAATTAATTACCTAata              <  1:3340571/128‑1 (MQ=255)
                                                                                                                  taAAAAATCAA‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACTATTTACCTTTCTTTAGGTAACTAATTAATTACCTAat               <  1:3009918/128‑1 (MQ=255)
                                                                                                                    taaaattattttttttttttttttAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACTATTTACCTTTCTTTAGGTAACTAATTAATTACCTAata              <  2:4211245/119‑1 (MQ=255)
                                                                                                                    aattataattttattatttttattAATAAAAAGACTCACATAAGTGAGTCAATTGAGATTATTTAATTATTAATTATTCTTTGATGAACTATTTACCTTTCTTTAGGTAACTAATTAATTACCTAata              <  2:6357616/119‑1 (MQ=255)
                                                                                                                     ataaTCCA‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTTTTTAATTATTAATTATTATTTGATGAACTATTTACATTTCTTTAGGTAACTAATTAATTACATAAtatt            >  1:5655709/3‑128 (MQ=255)
                                                                                                                      cAATCCA‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAAATATTTACATTTCTTTAGGTAACTAATTAATTAAATAttatta           >  1:5366006/1‑128 (MQ=255)
                                                                                                                       aaatacattttttttttttttAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACTATTTACCTTTCTTTAGGTAACTAATTAATTACCTAAtatta           <  1:100181/121‑1 (MQ=255)
                                                                                                                           tccatttttttttttttAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACTATTTACCTTTCTTTAGGTAACTAATTAATTACCTAATATTAtttt       <  2:3180660/124‑1 (MQ=255)
                                                                                                                            aattttttttttttttAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACTATTTACCTTTCTTTAGGTAACTAATTAATTACCTAATATTATTTTa      <  1:389829/126‑1 (MQ=255)
                                                                                                                             tttttttttttttttAATAAAAAGACTCAGATAAGTGAGTCAATTGAGATTATTTAATTATTAATTATTCTTTGATGAACTGTTTACCTTTCTTTAGGTAACTAATTAATTACCTAATATTATTTTAg     <  1:1712983/128‑1 (MQ=255)
                                                                                                                               tttttttttttttAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACTATTTACCTTTCTTTAGGTAACTAATTAATTACCTAATATTATTTTAGtt   <  1:5230949/128‑1 (MQ=255)
                                                                                                                                ttttttttttttAATAATATGACTCACATAAGTGAGTCAATTGAGATTATTTAATTATTAATTATTCTTTGATGAACTATTTACCTTTCTTTAGGTAACTAATTAATTACCTAATATTATTTTAGTTc  <  1:1597623/128‑1 (MQ=255)
                                                                                                                                ttttttttttttAATAAAAAGAATCACATAAGTGAGTCAATTGAGATTTTTTATTTATTAATTTTTGTTTGATGAAATATTTACCTTTATTAAGGTAAATAATTAATAACATAATATAAttttttttc  >  2:6055169/1‑123 (MQ=255)
                                                                                                                                |                                                                                                                               
TGTAACAAAAGTGGTTATTGAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCATTTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACTATTTACCTTTCTTTAGGTAACTAATTAATTACCTAATATTATTTTAGTTC  >  CP016816/87778‑88033

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.