New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 87906 =2618 (0.830)319 (0.110) 141/226 27.3 12.2% intergenic (+33/‑827) JCVSYN2_00345/JCVSYN2_00350 hypothetical protein/50S ribosomal protein L31
?CP016816 = 87902 2209 (0.780)intergenic (+29/‑831) JCVSYN2_00345/JCVSYN2_00350 hypothetical protein/50S ribosomal protein L31
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 2778 total aligned reads displayed.

TTGTGTAACAAAAGTGGTTATTGAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑TTTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACTATTTACCTTTCTTTAGGTAACTAATTAATTACCTAATATTATTTTA  >  CP016816/87775‑88029
                                                                                                                               |                                                                                                                                
  gtgtAACAAAAGTGTTTATTGAGTTGCAAGTAAAGTTAAAATTTATAATAAAATTTATATTCATTGAAAGTTAAATGTATATTTAGATTTTGAATATCTGATTTAAATGGATTATTAAAAAATCCA‑tt                                                                                                                               <  2:1301230/128‑1 (MQ=255)
   tgtAACAAAAGTGGTTATTGAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑ttt                                                                                                                              >  1:3415916/1‑128 (MQ=255)
   tgtAACAAAAGTGGTTATTGAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑ttt                                                                                                                              >  1:5888336/1‑128 (MQ=255)
    gtAACAAAATTTGTTATTTATTTGCAATTAAATTTAAAATTTATAATAAAATTTATATTAATTTAAATTCAAAATAATATTTATATTTTTAATACCTGATTTAAAATGATTATTAAACAATCCA‑tttt                                                                                                                             <  1:1834871/128‑1 (MQ=255)
    gtAACAAAAGTGGTTATTGAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑tttt                                                                                                                             >  2:5508741/1‑128 (MQ=255)
     tAACAAAAGTGGTTATTGAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTTATTTAAATTGATTATTAAACAATACA‑ttttt                                                                                                                            >  1:3162426/1‑128 (MQ=255)
       actataggggTTTTTGAGTTGCAATTAAAGTTTAAATTGATAATAAAATTGATATTCATGGAAATTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑ttttttt                                                                                                                          <  2:672257/120‑1 (MQ=255)
       aCAAAAGTGGTTATTGAGTTGAAATTAAATTTCAAATTGATAATAAAATTGATATTCATGGAAAGTCAAATTAATATTTAGATTTTGAAAAGCTGATTTAAATTGATTATTAAACAATCCA‑ttttttt                                                                                                                          <  1:6705423/128‑1 (MQ=255)
        cAATAGTGGTTATTGAGTTGCAAGTTAAGTGCAAATTGATAATTAAATTGATATGCATGGAAAGTCAAATGTATTTTTAGTTTTTGAATAGCTGATTTAAATGGTTAATTAAACAATCCA‑tttttttt                                                                                                                         <  1:3699188/128‑1 (MQ=255)
          aaaGTGGTTATTGAGTTGAAAGTAAATTTCAAATTGATAATAAAATTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAAACCA‑tttttttttt                                                                                                                       <  1:829016/128‑1 (MQ=255)
           aaGTTGTTATTGAGGTGCAAGTAAATTTCAAATTGATAATAAAATTTATATTCATGGAAATTCAAATTAATAATTATATTTTGAATAGCTCATTTAAATGGATTATTAAACAATCCA‑ttttttttttt                                                                                                                      <  1:456179/128‑1 (MQ=255)
            aGTGGTTATTGAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑tttttttttttt                                                                                                                     >  2:2466224/1‑128 (MQ=255)
             gTGGTTATTGAGTTGCAAGTAAAGTTCAATATTATAATAAAATTGATAATCATGGAAACTCAAATGAATATTTAGATTTTGAATATCTGATTTAAATCGATTATTAAACAATCCA‑ttttttttttttt                                                                                                                    <  1:4426749/128‑1 (MQ=255)
               ggTTATTGAGTTGCAAGTAAAGTTAAAATTGATAATAAAATTGATATTCATGGAAATTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑tttttttttttttta                                                                                                                  <  1:159727/128‑2 (MQ=255)
                 ttATTGAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑ttttttatttttttaat                                                                                                                >  2:3182211/1‑125 (MQ=255)
                 ttATTGAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCAA‑ttttttttttttttaat                                                                                                                >  1:4048758/1‑125 (MQ=255)
                  tATTGAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑ttttttttttttttaata                                                                                                               >  1:3318851/1‑124 (MQ=255)
                   aTTGAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑tttttttttttttaaataa                                                                                                              >  2:2389031/1‑122 (MQ=255)
                     tGATTTGGAAGTAAAGTTCAAATTGATAATAAAATTGATAATCATGGAAATTCAAATGAATATTTATATTTTTAATATCTGATTTAAATGGATTATTAAACAATACA‑‑TTTTTTTTTTTTTTAATaaaa                                                                                                           <  1:4317280/128‑1 (MQ=255)
                      gAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATaaaaa                                                                                                          >  2:1770511/1‑128 (MQ=255)
                       aGTTGCAAGTAAAGTTCAAATTGATAATAATATTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTTAATAGCTGATTTAAATGTATTATTAAACAATCAA‑‑‑TTTTTTTATTTTTAATaaaaaat                                                                                                        >  1:2848271/1‑126 (MQ=255)
                        gTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGTATTATTAAACAAT‑CA‑ATTTTTTTTTTTTTTAATaaaaata                                                                                                        >  2:4899166/1‑126 (MQ=255)
                         ttGCAAGTAAAGTTCAAATTGATAATAAAATTGATATTCATGGAAAGTCAAATTAATATTTTTATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGAc                                                                                                       <  1:1312403/128‑1 (MQ=255)
                          tgcacttAAAGTTAAAATTGATAAAAAAATTGATATTCATGGAAATTCAAATTAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGACt                                                                                                      <  2:1908228/122‑1 (MQ=255)
                               gTAAAGTTCAAATTGATAATAAAATTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑TTTTTTTTTTTTTTTAATAAAAAGACTcaca                                                                                                  >  2:6058840/1‑128 (MQ=255)
                               gTAAAGTTCAAATTGATAATAAAATTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑‑TTTTTTTTTTTTTAATAAAAAGACTCACATa                                                                                                <  1:5069438/128‑1 (MQ=255)
                                tAAAGTTCAAATTGATAATAAAATTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATaaaaataataaaaaa                                                                                                >  1:6595841/1‑118 (MQ=255)
                                  aatttaaaaTTGATACTAAAATTGATATTCATTGAAAGTCAAATGAATATTTATATTTTGAAAACCTGCATTAAATGGATAATTAAACCATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAg                                                                                              <  1:4668189/122‑1 (MQ=255)
                                  aaGTTCAAATTGATAATAAAATTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑TTTTTTTTTTTTTTTAATAAAAAGAATCACATaa                                                                                               >  2:2816201/1‑128 (MQ=255)
                                    tttCAAATTTATAATAAAATTGATATTTATGGAAATTAAAATGAATATTTAGATTTTGAATAGCTGATTTAAATTGATTATTAAACAATACA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTg                                                                                            <  2:5638811/127‑1 (MQ=255)
                                    gTTAAAATTGTTTATAAAATTGATATTTATGGAAAGTAAAATGAATATTTTTATTTTGTATAGCTGATTTAAATGGATTATTAAACAATACA‑TTTTTTTTTTTTTTTAATAAAAAGACTCACATAAGt                                                                                             <  2:3324264/128‑1 (MQ=255)
                                     ttCAATTTGATAATAAAATTGATATTCATGTAAAGTCAAATGAATATTTAGAATTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGa                                                                                           <  1:2125737/128‑1 (MQ=255)
                                     ttCAAATTTATAATAAAATTGATATTTATGGAAATTCAAATTAATATTTTGATTTTGAATATCTTATTTAAATGGTTTATTAAAAAATTCA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGa                                                                                           <  2:4140160/128‑1 (MQ=255)
                                       cAAATTGATAATAAAATTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑‑‑‑TTTTTTTTTTTAATAAAAAGACTCAAATAAGTGAGTCaa                                                                                      >  1:3085594/1‑128 (MQ=255)
                                        aaaTTGATAATAAAATTTATATTCATGGAAATTCAAATGAATATTTAGATTTTGAATATCTGATTTAAATGGATTATTACACACTCCA‑‑‑TTTTTTTTTTTTTAAAAAAAAGACACACAAAAGTGacaca                                                                                       >  2:4390160/1‑124 (MQ=255)
                                         aaTTGATAATAAAATTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGACTAAAATAAGTGAGTCa                                                                                       >  2:36292/1‑128 (MQ=255)
                                          aTTGATAATAAAATTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAAT‑CA‑ATTTTTTTTTTTATTAATAAAAAGAATCACAGAAGTGAGTCaa                                                                                      >  1:1998082/1‑128 (MQ=255)
                                           tttataataAAAATTTTTTTCATGGATAGTATAATTAATATTTATATTTTGAATTGCTGTTTTAATTGGATTATTAAAAAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAAt                                                                                     <  2:2717653/125‑1 (MQ=255)
                                              ataataAAATTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGTATTATTAAACAATCAA‑TTTTTTTTTTTTTTTATTAAAAAGAATCACATTATTGTGTAAAttc                                                                                   >  2:2971731/1‑127 (MQ=255)
                                                  taaAATTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCAAATAAGTGAGTCAATTACGatt                                                                              >  2:448798/1‑128 (MQ=255)
                                                   aaaaTTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAATTGAGTCAATTGCGatta                                                                             >  1:1382589/1‑128 (MQ=255)
                                                    aaaTTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTATTTTTTAATAAAAATACTCAAATATGTGATGCAATTTCGattat                                                                            >  1:3575724/1‑128 (MQ=255)
                                                        tGATATTCATTTAAAGTAAAATTAATATATTGATTTTTAATATCTGATTTAAATGGATTATTAAACAATCCA‑TTTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATtta                                                                         <  2:6500176/128‑1 (MQ=255)
                                                         tatatTCATTGAAATTCAAATTTATTTTTATATTTTTTATAGCTTATTTAAATGGTTTATTAAAAAATTCA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATttaat                                                                       <  2:2185735/127‑1 (MQ=255)
                                                          atatTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAATACTCAAATAATTAATACAATTGAGATTATtaaatt                                                                      >  2:3950579/1‑128 (MQ=255)
                                                          atatTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATttaatt                                                                      <  1:4795299/128‑1 (MQ=255)
                                                           tatTCTAGGTAAGTCAAATTAATATTTATATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATttaatta                                                                     <  1:3806651/128‑1 (MQ=255)
                                                            atTCATGGAAAGTCAAATGAATATTTAGATTTTTAATAGCAGATTTAAATGGATTATTAAACAATCCA‑TTTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATttaatta                                                                     <  1:6479374/128‑1 (MQ=255)
                                                            aatCATTGAAAGTCAAATGAATATTTATAATTATAAAAGCTGATTTATATTGATTATTAACCAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATttaattat                                                                    <  1:493351/126‑1 (MQ=255)
                                                             ttCATTGAAATTAAAATTAATATTTATATTTTGAATATCTTATTTAAATGGATTATTAAAAAATAAA‑TTTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATttaattat                                                                    <  1:1006291/128‑1 (MQ=255)
                                                               cATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAATAATCAAATATGTGAGAGAATTGCTATTTTtttattattaa                                                                 >  2:1638403/1‑128 (MQ=255)
                                                                ctGGTAAGTCCAATTAATATTTAGTTTTTGAATTGCTGTTTTAAATTGATTATTAAACAA‑AGA‑ATTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATttaattattaat                                                                <  2:3454857/127‑1 (MQ=255)
                                                                aTGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGACTAACATAATTTAGTCAATTTCGATTATttatttattatt                                                                >  2:5144051/1‑126 (MQ=255)
                                                                 tGGTAATTCAAATTAATATTTAGATTTTTAATAGCTGATTTAAATTGATTATTAAACAAACCA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATttaattattaatt                                                               <  2:903149/128‑1 (MQ=255)
                                                                 tGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCATTTTTTTTTTTTTTTTAAAAAAAAGAAACAAATATTTGTGAAATTTGAGAATTTtttattattaa                                                                 >  2:760406/1‑128 (MQ=255)
                                                                   gAAAGTCAAATGAATATTTAGATTTTGAATATCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAAAAAAAATACTAAAATAATTTATTCAATTGCGATATTTtaattattaattat                                                             >  2:4270319/1‑128 (MQ=255)
                                                                    aaaGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGACTAAAATAAGTGAGTCAATTTCGATTATTTaattattaattatt                                                            >  1:2220389/1‑128 (MQ=255)
                                                                      atgcAAATTAATATTTAGTTTTTGAATTGCTGATTTAAATGTATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCt                                                          <  2:5888336/125‑1 (MQ=255)
                                                                        tCAAATTAATTTTTTGTTTTTGTATAGCTGTTTTAAATGGTTTATTAAAAAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCttt                                                        <  2:5261329/128‑1 (MQ=255)
                                                                            aTGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑‑TTTTTTTTTTTTTAATAAAAAGACTAACATAAGTGAGTCTATTGCGATTATTTAATTATTAATTATTCTTttatga                                                   >  1:2983161/1‑128 (MQ=255)
                                                                             tGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑‑TTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATtta                                                                         <  1:932127/105‑1 (MQ=255)
                                                                              gAATATTTAGATTTTGAATATCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGaa                                                  <  1:2398789/128‑1 (MQ=255)
                                                                              gAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAAAAAAAAAACAACCATAAGTTAGGAAATTCCAATTTTTAAATTATTAATTTTAATTTGTTGaa                                                  >  2:2261553/1‑128 (MQ=255)
                                                                              gAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑‑TTTTTTTTTTTTTAATAAAAAGAATCACATAAGTTAGTCAATTCAGATTATTTAATTATTAATTATTCTTTGATTAAc                                                 >  1:6839793/1‑128 (MQ=255)
                                                                               aaTATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAAAAAAACAAAAGTGAGAAAATTGCGATTTTTAAATTATTAATTATAATTTGATAAAc                                                 >  2:3856018/1‑128 (MQ=255)
                                                                                atatTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAAACTAAAATAATTTATTAAATTGAGATTATTTAATTATTAATTATTATTTTATTaaat                                                >  1:1721410/1‑126 (MQ=255)
                                                                                 tatttttattttGAATATCTGATTTAAATTGATTATTAAACAATCAA‑TTTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACt                                                <  1:6279809/128‑1 (MQ=255)
                                                                                 tatTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑TTTTTTTTTTTTTTTAATAAAAATAAAAAAAAAAATTATTAAATTACTATTATTTAATTATTATTTATTATTTTATTaaat                                                >  2:2590735/1‑126 (MQ=255)
                                                                                  atttttaTTTTGAATAGCTGATTTAAATTGATTATTAAACAATACA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACTAt                                              <  1:2767877/122‑1 (MQ=255)
                                                                                  attttgattttgAATATCTTATTTAAATTGATTATTAAACAAT‑AA‑ATTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACTAt                                              <  2:622801/128‑1 (MQ=255)
                                                                                   tttttaTTTTGAATATTTGATTTAAATTGATTATTTAACAAT‑CA‑ATTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACTAtt                                             <  2:1509448/123‑1 (MQ=255)
                                                                                     tAGATTTTGAATAGCTGAATTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTTAGTCAATTGAGATAATTTAATTATTAATTATTATTTGATGAACTATTTa                                           >  1:2510302/1‑128 (MQ=255)
                                                                                      agagTTTGAATAGCTGATTTAAATGGCTTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACTATTTAc                                          <  1:6039638/128‑1 (MQ=255)
                                                                                      aGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAAAAAAAAGACTCACATAAGTGAGTCAATTCCGATTTTTTAATTATTAATTATTCTTTGATGAACTATTTAc                                          >  2:4757118/1‑128 (MQ=255)
                                                                                      aGATTTTGAATAGCTGATTTAAATGGATTAATAAACAAT‑CA‑ATTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACTATTTAc                                          <  2:6843213/128‑1 (MQ=255)
                                                                                       taTTTTGAATAGCTGATTTAAATTGATTATTAAAAAATTCA‑‑TTTTTTTTTTTTTTAATAAAAAGACTGACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACTATTTAcc                                         <  2:5018867/127‑1 (MQ=255)
                                                                                        aTTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑TTTTTTTTTTTTTTTAATAAAAACACACACAAAAGTGAGTCAATTGCGATTTTTTAATTATTAATTATTCTTTATTGAACTATTTAcc                                         >  2:1146808/1‑128 (MQ=255)
                                                                                         ttttGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑‑TTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATGGCGATTATTTAATTATTAATTATTCTTTGATGAACTATTTACcttt                                      >  1:1131261/1‑128 (MQ=255)
                                                                                           ttGAATATATGATTTAAATTGCTTATTAAACAAACAA‑TTTTTTTTTTTTTTTAATAAAAAGACTAACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACTATTTACcttt                                      <  1:577770/128‑1 (MQ=255)
                                                                                            tGAATAGCTGATTTAAATTGATTAATAAAAAATCCA‑TTTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACTATTTACctttc                                     <  1:5368404/128‑1 (MQ=255)
                                                                                            tGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATAGCTATTATTTATTTATTAATAATTCTTTGATAAACTATTTAcatatat                                    >  1:2311185/1‑122 (MQ=255)
                                                                                                 atatGATTTAAATGTATTAATAAACAATTCA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCATATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACTATTTACCTTTCTTTAgg                               <  1:150691/125‑1 (MQ=255)
                                                                                                 aGCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGACACACATAAGTGAGTCAATTGCGATTATTTTATTTTTAATTTTTCTTTGATTAACTATTTACCtttatttatg                               >  2:3719633/1‑126 (MQ=255)
                                                                                                 aGCTGATTTAAATGGATTATTAAACAATCCA‑‑‑TTTTTTTTTTTTTAATAAAAAGACTCACATAAGTCAGTCAATTGCGATAATTTATTTATAAATTATTCTTTGATGAACTATTAACCTTTCTTTTGGt                              >  2:306941/1‑128 (MQ=255)
                                                                                                  gCTGATTTAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAAACTCACATAAGTGAGTAAATTAAAATTTTTTAATTATTAATTATTATTTTATGAACTATTTACATTTATTTAGGt                              >  2:2047983/1‑128 (MQ=255)
                                                                                                   cTGATTTAAATGGATTATTAAACAATCCA‑‑‑TTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATAATTTGATGAACTATTTAACTTTATTTATGTaa                            >  1:5239432/1‑128 (MQ=255)
                                                                                                      tttttatagtattagtTAACAATACA‑‑TTTTTTTTTTTTTTATTAACAAGTCTGACATAAGTGAGTCACTTGCGTTTATTTAATTATTAATTATTCTTTGATGATCTATTTACCTTTCTTTAGGTAAca                          <  2:6369763/118‑2 (MQ=255)
                                                                                                       tttAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAATACTCAAATAAGTGAGAAAATTGCTATTATTTAATTATTAATTATTATTTTATGAACTATTTAACtttatttatttaaata                         >  1:2640423/1‑120 (MQ=255)
                                                                                                       tttAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACTATTTACCTTTCTTTAGGTAACta                         <  1:6388377/128‑1 (MQ=255)
                                                                                                       tttAAATGGATTATTAAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGACTAACATAAGTGAGGCAATTGCGATTATTTATTTTTTAATTATTATTTGATGAACTATTTACATTTCTTTAGGTAACta                         >  1:5521978/1‑128 (MQ=255)
                                                                                                        ttAAATGGATTATTAATCAATAGA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACTATTTACCTTTCTTTAGGTAACtaa                        <  2:6614308/128‑1 (MQ=255)
                                                                                                        ttAAATGGATTATTAAACAATCCA‑TTTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGACAATTGCTATTATTTATTTATTAATTATTATTTAATGAAATATTTACATTTCTTAAGGTAAAta                         >  1:6173074/1‑128 (MQ=255)
                                                                                                         ttaattgtttattaAATAATTCA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACTATTTACCTTTCTTTAGGTAACtaat                       <  2:5425107/120‑1 (MQ=255)
                                                                                                                attattAAACTATATA‑‑TTTTTTTTTTTTTTAATAAAAAGAATCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACTATTTACCTTTCTTTAGGTAACTAATTAATTAc                <  2:102052/128‑1 (MQ=255)
                                                                                                                  tattaAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGACACCCATAATTGAGTAAATTGCCATTATTTAATTAATAATTATTATTTTATTAACTAATTACCTTAATTTAGGTAAATAATTATTTAcat              >  2:4627478/1‑126 (MQ=255)
                                                                                                                   attaAACAATCCA‑‑TTTTTTTTTTTTTTAATAAAAAGAATCAAATAAGTGAGTAAATTGCGATTATTTAATTATTAATTATTATTTGATGAAATATTTACATTTCTTTAGTTAACTAATTAATTACATa             >  1:4170543/1‑128 (MQ=255)
                                                                                                                    ttaAACAATCCA‑TTTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTATTTATTAATTATTCTTTGATGAAATATTTACCTTTCTTTAGTTAAAAAATTAATTACCTa             >  2:5774450/1‑128 (MQ=255)
                                                                                                                      aaaCAATCCATTTTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTATTTTATGAACTATTTACATTTGTTTAGGTAACTAATTAATTAcatta            >  2:1414048/1‑124 (MQ=255)
                                                                                                                        ataaTCCA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTTTTTAATTATTAATTATTATTTGATGAACTATTTACATTTCTTTAGGTAACTAATTAATTACATAAtatt        >  1:5655709/3‑128 (MQ=255)
                                                                                                                        ataaTCCA‑‑TTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACTATTTACCTTTCTTTAGGTAACTAATTTATTACCTAAtatt        >  1:3883351/3‑128 (MQ=255)
                                                                                                                               |                                                                                                                                
TTGTGTAACAAAAGTGGTTATTGAGTTGCAAGTAAAGTTCAAATTGATAATAAAATTGATATTCATGGAAAGTCAAATGAATATTTAGATTTTGAATAGCTGATTTAAATGGATTATTAAACAATCCA‑TTTTTTTTTTTTTTTAATAAAAAGACTCACATAAGTGAGTCAATTGCGATTATTTAATTATTAATTATTCTTTGATGAACTATTTACCTTTCTTTAGGTAACTAATTAATTACCTAATATTATTTTA  >  CP016816/87775‑88029

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.