BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP016816	311153 =	1610 (0.510)	327 (0.130)	138/206	23.3	20.6%	intergenic (‑76/‑238)	JCVSYN2_01300/JCVSYN2_01305	hypothetical protein/30S ribosomal protein S21
*	?	CP016816	= 311148	1188 (0.460)	327 (0.130)	138/206	23.3	20.6%	intergenic (‑71/‑243)	JCVSYN2_01300/JCVSYN2_01305	hypothetical protein/30S ribosomal protein S21
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 1921 total aligned reads displayed.

CAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAA  >  CP016816/311026‑311280

cAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatat                                                                                                                                 >  1:5607784/1‑128 (MQ=255)

   ttGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatata                                                                                                                              >  1:3192231/1‑128 (MQ=255)

   ttGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACAATCATtatatata                                                                                                                              >  1:1001654/1‑128 (MQ=255)

    tGTAATAACTAATCAAAATCAAATTAAAATTGTAATTAACTTTTTCATTTTACACACACCTTATAAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatat                                                                                                                             <  1:531740/128‑1 (MQ=255)

     gTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatata                                                                                                                            >  2:151100/1‑128 (MQ=255)

     gTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGAATCAAAACATATATAACATACATTCATtatatatata                                                                                                                            >  1:1598373/1‑128 (MQ=255)

       aataaCTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatata                                                                                                                          >  2:5600066/1‑128 (MQ=255)

        ataaCTAATAAAAATTAAATTAAAATTGTAATTAAATTTTTCATTTTAAACACACCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatat                                                                                                                         <  2:5668210/128‑1 (MQ=255)

         tatcTAATAGAAATTAACTTAAAATTGTAATTAACTTTTTAATTTTACAAACCACTTATTAAAAAATAAAATACTTGTTACATAAGATTCAAAACATATATAACATACATTCATtatatatatatata                                                                                                                        <  1:933018/125‑1 (MQ=255)

         taaataaaCTAAATTAAATAAAAATATTAATAAAATATTTCATTTTAAACACACCTTATTAAAAAAAAAAATAATTTTTAAATAATATTCAAAACATATATAACATACATTCATtatatatatatata                                                                                                                        <  1:5865661/128‑1 (MQ=255)

          aaCTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatataaatat                                                                                                                       >  1:2206235/1‑128 (MQ=255)

           aCTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatata                                                                                                                      >  2:4033956/1‑128 (MQ=255)

            cTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatat                                                                                                                     >  2:2104879/1‑128 (MQ=255)

             tAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACACATTATTAAAAAATAAAATACTTGTTACATAAGATTCAAAACATATATAACATACATTCATtatatatatatatatata                                                                                                                    <  1:2763312/128‑1 (MQ=255)

                tcaaaaTGAACTTTAAATTGTAATTAACTTTTTCATTTTACACACAACTTATTAAAAAATAAAATACTTGTTACATACGATTAAAAACATATATAACATACATTCATtatatatatatatatataaat                                                                                                                 >  1:289142/4‑128 (MQ=255)

                tacataTGAACTTAAAATTGTAATTTACTTTTTCTTTTTACACACACCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatat                                                                                                                 <  2:5502296/123‑1 (MQ=255)

                tCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACCCCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAACCATATATAACATACATTCATtatatatatatatatatatat                                                                                                                 >  2:6112700/1‑128 (MQ=255)

                tCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACAAACCCCTTATTAAAAAAAAAAATAATTGTTACAGACGATTCAAAACATATATAACATACATTCATtatatatatataaatataaat                                                                                                                 >  2:5026752/1‑128 (MQ=255)

                   aaaTGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatatata                                                                                                              >  1:1166911/1‑128 (MQ=255)

                   aaaTGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCACTTATTAAAAAATAAAATACTTGTTACATACGATTAAAAACATATATAACATACATTCATtatatatatatatatatatatata                                                                                                              <  2:2242269/128‑1 (MQ=255)

                   aaaTGAACTTAAAATTGTAAATAACTTTTTCATATTACACACCACTAATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatatata                                                                                                              <  1:571508/128‑1 (MQ=255)

                    aaTGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatatataa                                                                                                             >  2:268061/1‑127 (MQ=255)

                     aTGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatatatata                                                                                                            <  1:1481363/128‑1 (MQ=255)

                        aaCTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatatataatgca                                                                                                         >  2:4173609/1‑123 (MQ=255)

                         aCTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATATATAAAAtaa                                                                                                        >  1:671161/1‑126 (MQ=255)

                           ttAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTCGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatataaagaaatatg                                                                                                      >  1:3781519/1‑118 (MQ=255)

                            ttaaaTTTTAATTTAATTTTTATATTTACACACACATTATTAAAAAATAAAATACTAGTTAAATAAGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAATGCAatat                                                                                                   <  1:4320810/126‑1 (MQ=255)

                              aaaTTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAATGCAATATGt                                                                                                 >  1:6250254/1‑128 (MQ=255)

                                 ttGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATATATATAATGCAATATTTa                                                                                                >  1:2296599/1‑128 (MQ=255)

                                  agtatttatatttttAATTTTAAACACACATTATTATAAAATAAAATACTTGTTACATACTATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAATGCAATATGTAAAt                                                                                             <  2:1840788/118‑1 (MQ=255)

                                   gTAATTAAATTTTTCATTTTACACACACCTTATTAAAAAATAAAATAATTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAATGCAATATGTAAATg                                                                                            <  1:5076457/128‑1 (MQ=255)

                                   gTAATTAAATTTTTCATTTTACACACACCTTATTAAAAAATAAAATAATTGTTACATAAGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAATGCAATATGTAAATg                                                                                            <  1:796755/128‑1 (MQ=255)

                                    tAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAATGCAATATGTAAATGa                                                                                           >  2:3047058/1‑128 (MQ=255)

                                     aaTTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATTTATATAATGCAATATGTAAAtt                                                                                            >  2:5309332/1‑127 (MQ=255)

                                     aaTTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAATGCAATATGTAAATGaa                                                                                          >  2:3756046/1‑128 (MQ=255)

                                       ttAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAATGAAATATATAAATTaaaa                                                                                        >  2:796755/1‑128 (MQ=255)

                                       ttAAATTTTTCATTTTACACAACCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAATGCAATATGTAAATGaaaa                                                                                        <  2:3332218/128‑1 (MQ=255)

                                       tataCTTTATAATTTTACACAAACAATATTAAAAAATAAAATAATTTATACATAATATTCAAAACATATATAAAATACAATCATTATATATATATATATATATATATATAATGCAATATGTAAATGaa                                                                                          <  1:5208909/125‑1 (MQ=25)

                                         aaCTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAata                                                                                      >  2:490792/1‑128 (MQ=255)

                                         aaCTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATGCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAATACTATATGAATATGAAAata                                                                                      >  2:6842582/1‑128 (MQ=255)

                                            attttaattttaaAAACACATTATTAAAAAATAAAATACTTGTTAAATAAGATTCAAAACATATATAACATACATTCATTATATATATATATATATATATATATAATGCAATATGTAAATGAAAatat                                                                                     <  2:6229617/127‑1 (MQ=38)

                                              tttAATTTTACACAACAATTATTAAAAAATAAAATAATTGTTACATAAGATTTAAAAAATATATAACATACATTCAT‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGta                                                                                 <  1:1826212/128‑1 (MQ=255)

                                               ttCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAATGAAATATGTAAATGAAAATATTGtat                                                                                >  2:1298783/1‑128 (MQ=255)

                                                   ttttACACACCTCTTATTAAAAAATAAAATACTTGTTTCATACTATTCAAAACATATATAACATACATTCATTAT‑‑‑T‑TATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGc                                                                          <  1:4937828/128‑1 (MQ=255)

                                                     ttACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAAcc                                                                      >  2:197339/1‑128 (MQ=255)

                                                       acacacCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATAATGCAATATTTAAATGATAATATGGTATAAAAGCaaaagt                                                                    >  2:4820010/1‑124 (MQ=255)

                                                          cacaCCTTATTATAAAATAAAATACTTGTTACATACTATTCAAAACATATATAAAATACATT‑ATT‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCg                                                                     <  2:6397038/128‑1 (MQ=255)

                                                              ccTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATATATATAATGCAATATTTAAAATAAAATATTTTATAATATAAACCttt                                                                   >  1:6098058/1‑128 (MQ=38)

                                                                 tattaAAAAATAAAATAGTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAATTAAATATGTTAAATAAAATATGGTATAATTGCAACCttttttta                                                              >  2:4658998/1‑124 (MQ=255)

                                                                 tattaAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAATTAAATATTTAAATAAAAATATGATATAATATAAAACTTTTATaa                                                              >  1:3947095/1‑128 (MQ=255)

                                                                   ttaAAAAATAAAATAATTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTa                                                          <  1:5414926/128‑1 (MQ=255)

                                                                     aaaaaaTAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAATGCAATATGTAAAAGAAAATATGGTATAATAGCAACAGTTTATAAAGTa                                                          >  2:318680/1‑128 (MQ=255)

                                                                        aaataaaataCTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATATATATAATACAATATTTAAAAAAAAATATTTTATAATATAAACAGTATATAAAGTaa                                                         >  1:4428477/1‑128 (MQ=37)

                                                                         aataaaataCTTTTTACATAAGATTAAAAAAATATATAAAATACATTAAT‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTaaaaa                                                      <  2:1743203/128‑1 (MQ=255)

                                                                         aataaaataCTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTaaaaa                                                      >  1:4073151/1‑128 (MQ=255)

                                                                         aataaaataCTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATAATGCAATATGTTAATGAAAATATGGTATAATACAAACCTTATATAAAGTaaaaaaa                                                    >  2:4394927/1‑128 (MQ=255)

                                                                             aaataCTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATa                                                  >  1:6541329/1‑128 (MQ=255)

                                                                             aaataCTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCATTTATAAATTAAAAAAATa                                                  >  1:3374535/1‑128 (MQ=255)

                                                                               ataCTTGTTACATACGATTCAAAAAATATATAACATACATTCAT‑‑‑‑‑‑‑‑TATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAatat                                          <  1:4572248/128‑1 (MQ=255)

                                                                                taCTTGTTACATACGATTAAAAACATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAata                                           <  2:5412053/128‑1 (MQ=255)

                                                                                 aCTTGTTAAATACGATTAAAAACATATATAACATACATTCATTATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGt                                                <  2:908740/128‑1 (MQ=255)

                                                                                  cTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATAATTCAATATTTAAATGAAAATATGTTATAATATAAACAGTTTATAAAATAAAAAAATAGTAAata                                           >  1:4204974/1‑128 (MQ=255)

                                                                                  cTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAata                                           <  1:3076957/128‑1 (MQ=255)

                                                                                    tGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATTGTATAATAGCAAGCTTTTATAAAGTAAAAAAATATTTAata                                           >  1:1254855/1‑128 (MQ=255)

                                                                                    tGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGAAACCTTTAATAAAGTAAAAAAATATTAAAtata                                         >  1:2412612/1‑128 (MQ=255)

                                                                                       tACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAATGCAATATATAAAAGAAAATATGTTATAATATCAACCTTTTATAATGTAATAAAATatataatataa                                        >  2:6701579/1‑127 (MQ=255)

                                                                                         cATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATTTTATAATAGCAACAGTTTATAAAGTAAAAAAATATTAAATAtacta                                      >  1:1711116/1‑128 (MQ=255)

                                                                                              gATTCAAAACATATATAACATACATTAAT‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTAt                                 <  2:1609274/128‑1 (MQ=255)

                                                                                                ttataaaaATATATAAAATAAATTAAT‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTAttt                               <  1:2649856/124‑1 (MQ=255)

                                                                                                ttCAAAACATATATAACATACATACAT‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTAttt                               <  2:3890954/128‑1 (MQ=255)

                                                                                                 tCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAATGAAATATGTAAATGAAAATATTTTATAATAGCAACCTTTTATAAATTAAAAAAATATTAAATATACAACTTATTTa                              >  2:4275362/1‑128 (MQ=255)

                                                                                                    aaaGATATATAACATAAATAGAT‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACta                           <  2:5123567/128‑1 (MQ=255)

                                                                                                    aaaCATATATAACATACATTCAT‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATAAGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACta                           <  2:2774195/128‑1 (MQ=255)

                                                                                                      aaatatatAAAATAAATTAAT‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACtaat                         <  2:4524635/126‑1 (MQ=255)

                                                                                                       cATATATAACATACATTCATTATATATATATATATATATATATA‑AAT‑CAATATTTAAATTAAAATATTTTATAATAGCACCAGTTTATAAAATAAAAAAATATTAAATATAATAATAATTAACaaata                        >  2:2936728/1‑128 (MQ=255)

                                                                                                        atatatAACATACATTCATTATATATATATATATATATATATATAATGAAATATGTAAATGAAAATATGTTATAATAGCAACAGTTTAAAAAGTAAAAAAATATTAAATATACTAATTATTTACtaat                         >  1:66136/1‑128 (MQ=38)

                                                                                                        atatatAAAATATATT‑‑TTTTATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACAGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACtaataa                       <  2:1190985/128‑1 (MQ=255)

                                                                                                          atataACATACATTCAT‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTAAAAAGTAAAAAAATAGTAAATATACTAATTATTTACTAATaaaa                     >  2:5814448/1‑128 (MQ=255)

                                                                                                            ataACATACATTCAT‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTATAAAAATAGTAAATATACTACTTATTTACTAATAAAATc                   >  2:2422504/1‑128 (MQ=255)

                                                                                                             taACATACATTCAT‑‑TATATATATATATATATATATATAATTCAATATTTAAATGAAAATATGGTATAATAGCAACCGTTTATAAATTAAAAAAATATTAAATATACAAAATATATACTAATAAAATCt                  >  2:1411485/1‑128 (MQ=255)

                                                                                                               aaatacatTCATTATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCt                  <  1:2972756/126‑1 (MQ=255)

                                                                                                                 atacatTCAT‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACAACATATATACTAAAAAAATCTAttt              >  2:5224255/1‑128 (MQ=255)

                                                                                                                 atacatTCAT‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACAGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTAttt              >  1:3629619/1‑128 (MQ=255)

                                                                                                                 atacatTCAT‑‑TATATATATATATATATATATATAATGAAATATGTAAATGAAAATATTGTATAATAGCAACAGTTTATAAATTAAAAAAATATTAAATATACTACTTATAAAATAAAAAAATCTAttt              >  2:6586867/1‑128 (MQ=255)

                                                                                                                  tacatTCATTATACATATATATATATATATA‑A‑AATACAATATTTAAATTAAAATATGTTATAATATCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAAACTAtttt             >  1:1956934/1‑128 (MQ=255)

                                                                                                                  tacatTCAT‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATATTAAATATACTACTTATTTACTAATAAAATATAtttt             >  2:344504/1‑128 (MQ=255)

                                                                                                                  tacatTCAT‑‑TATATATATATATATATATATATAATGAAATATGTAAATGAAAATATGGTATAATAGCAACAGTTTATAAAGTAAAAAAATATTAAATATACTACTTATTTAGTTATAAAATCTAtttt             >  2:3608618/1‑128 (MQ=255)

                                                                                                                   acatacattcattatatatatatatatatatataATGCAATATGTAAATGAAAATATTGTATAATAGCAACAGTTTATAAAGTAAAAAAATATTAAATATACTACTTATTTACTAATAAAATCTAttt              >  1:6818571/13‑128 (MQ=38)

                                                                                                                     atacattcattatatatatatatatatatataATGCAATATGTAAATGAAAATATGTTATAATAGCAAACGTTTATAAAGTAAAAAAATAGTAAATATACTAATTATTTACTAATAAATTCTAttttt            >  1:5950848/11‑128 (MQ=38)

                                                                                                                     atacattcattatatatatatatatatatataATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTAttt              <  2:256252/116‑1 (MQ=255)

                                                                                                                      cattcattatatatatatatatatatatataATGCAATATGTAAATGAAAATATTGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTttta           >  1:6405371/8‑128 (MQ=255)

                                                                                                                      cattcattatatatatatatatatatatataATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTttta           >  1:2516759/8‑128 (MQ=255)

                                                                                                                       tcattATATATATATATATATATATATATAATGAAATATTTAAATGAAAATATGTTATAATAGCAACCGTTTATAAATTAAAAAAATAGTAAATATACTAGTTATTTACTAAAAAAATCTAattttta          >  2:1064032/1‑126 (MQ=38)

                                                                                                                          ttcattatatatatatatatatatataATGCAATATGAAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATATTAAATATACTACTTATAAACTAATAAAATCTATTtttattta       >  1:1406740/6‑128 (MQ=255)

                                                                                                                           gcattatatatatatatatatatataATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATATTAAATATAATAATTATTTACTAATAAAATCTATTTTTATTTaa      >  2:6497190/5‑128 (MQ=255)

                                                                                                                            ttatatatatatatatatatatataATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGt                                                           <  1:4838011/73‑1 (MQ=255)

                                                                                                                            ttatatatatatatatatatatataATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTaaa     <  1:4736056/127‑1 (MQ=255)

                                                                                                                             tatatatatatatatatatatataATGCAATATGTAAATGAAAATATTGTATAATATCACCATTTTATATAGTAAAAATATATAATATATGCTACTTATTTAATTATAATATATATTTTTATTTaaaa    >  1:350686/1‑128 (MQ=255)

                                                                                                                             tatatatatatatatatatatataATGCAATATGTAAATGAAAATATGGTATAATAGCAACAGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTaaaa    >  1:21075/1‑128 (MQ=255)

                                                                                                                              atatatatatatatatatatataATGCAATATTTAAATGAAAATATGTTATAATAGCAAACTTTTATAAATTAAAAAAATATTAAATATACTACTTATTTACTAATAAAATATATTTTTATTaaaaaa   >  2:5945254/1‑128 (MQ=255)

CAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAA  >  CP016816/311026‑311280

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.