New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 311153 =1610 (0.510)327 (0.130) 138/206 23.3 20.6% intergenic (‑76/‑238) JCVSYN2_01300/JCVSYN2_01305 hypothetical protein/30S ribosomal protein S21
?CP016816 = 311148 1188 (0.460)intergenic (‑71/‑243) JCVSYN2_01300/JCVSYN2_01305 hypothetical protein/30S ribosomal protein S21
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 1799 total aligned reads displayed.

TGTACCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTA  >  CP016816/311021‑311275
                                                                                                                               |                                                                                                                                 
 gTACCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATAcattcat‑‑t                                                                                                                                >  2:5146823/1‑128 (MQ=255)
 gTACCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATAAAACATAcattcat‑‑t                                                                                                                                >  1:2699969/1‑128 (MQ=255)
        ttGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACAATCAT‑‑tatatata                                                                                                                         >  1:1001654/1‑128 (MQ=255)
         tGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatat                                                                                                                        >  1:3231964/1‑128 (MQ=255)
              tatcTAATCAAAATGAACTTATAATTGTAATAAACTTTTTCATTTTACACACCCATTATTAAAAAATAAAATAATTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatata                                                                                                                   <  1:1246715/125‑1 (MQ=255)
              taaCTAAGCCAAATTAACTTAAAATTGTAATTAACTTTTTCATTTTACAAACACCTTATTAAAAAATAAAATAATTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatata                                                                                                                   <  1:1955157/128‑1 (MQ=255)
              taaCTAAAAAAAATTAACATAAAATTATATTTAACATTATCATATTACACACCCCTTATAAAAAAAAAAAAAACTTTTTACATACTATTCAAAACATATATAACATACATTCAA‑‑aatatatatatata                                                                                                                   <  1:2099422/128‑1 (MQ=255)
                aCTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATATTACACACACCTTATTAAAAAATAAAATACTTGTTACATAAGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatata                                                                                                                 <  2:5668939/128‑1 (MQ=255)
                 cTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatat                                                                                                                >  2:2104879/1‑128 (MQ=255)
                  tAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatgtatata                                                                                                               >  1:4107722/1‑128 (MQ=255)
                  tAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatata                                                                                                               >  1:2573959/1‑128 (MQ=255)
                  tAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATAAAACATACATACAT‑‑tatatatatatatatata                                                                                                               >  1:3519298/1‑128 (MQ=255)
                   aataaaaaTTATCTTATAATTTTAATTTAATTTTTCATTTTTAACACACCTTATTATAAAATAAAATAAATTTTAAATATTATTCAAAAAATATATAACATACATTCAT‑‑tatatatatatatatatat                                                                                                              <  1:5449768/123‑1 (MQ=255)
                   aaTCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatatat                                                                                                              >  2:5812142/1‑128 (MQ=255)
                   aaTCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatatat                                                                                                              <  2:5607784/128‑1 (MQ=255)
                     tCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatatatat                                                                                                            >  2:269713/1‑128 (MQ=255)
                     tCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatatatat                                                                                                            <  1:6272125/128‑1 (MQ=255)
                     tCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatatatat                                                                                                            <  1:5642276/128‑1 (MQ=255)
                     tCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatatatat                                                                                                            >  1:3098613/1‑128 (MQ=255)
                       caaaataaCTTAAAATTGTAATTAACTTTATCATTTTACACACACATTATTAAAAAATAAAATACTTGTTACATAAGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatatatatat                                                                                                          <  1:805487/122‑1 (MQ=255)
                         aaTGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAATACATATATAACATACATTCAT‑‑tatatatatatatatatatatataa                                                                                                        >  1:1825974/1‑127 (MQ=255)
                          aTGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatatatatataat                                                                                                       >  1:1170816/1‑126 (MQ=255)
                           tGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatatatatataatg                                                                                                      >  2:3085887/1‑125 (MQ=255)
                              aCTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatatatatatatataat                                                                                                   >  2:1198965/1‑124 (MQ=255)
                              aCTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatatatatatacttcaa                                                                                                   >  1:5741265/1‑122 (MQ=255)
                                ttAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatatatatataattaaata                                                                                                 >  1:4213348/1‑120 (MQ=255)
                                ttAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatatatataatgcaatatg                                                                                                 <  2:5514122/128‑11 (MQ=255)
                                ttAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatatatataatgcaatatg                                                                                                 <  1:4419357/128‑11 (MQ=255)
                                 tAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatatatatataatgaatgta                                                                                                <  2:1762753/128‑10 (MQ=255)
                                 tAAAATTGTAATTAAATTTTTCATTTTACACACACATTATTAAAAAATAAAATAATTGTTACATAAGATTCAAAAAATATATAAAATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAatat                                                                                              <  2:6208147/128‑1 (MQ=255)
                                  aaaaTTGTAATTAACTTTTTCTTTTTAAAAACCACTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTAAT‑‑‑‑TATATATATATATATATATATATAATGCAATATg                                                                                             <  2:3609753/128‑1 (MQ=255)
                                   aaaTTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAAAGCAATATGt                                                                                            >  2:2830021/1‑128 (MQ=255)
                                    aaTTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATATAATGCTATATg                                                                                             >  1:5891354/1‑128 (MQ=255)
                                        gTAATTAAATTTTTCATTTTACACACACCTTATTAAAAAATAAAATAATTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATg                                                                                       <  1:5076457/128‑1 (MQ=255)
                                            tataCTTTATAATTTTACACAAACAATATTAAAAAATAAAATAATTTATACATAATATTCAAAACATATATAAAATACAATCAT‑‑TATATATATATATATATATATATATAATGCAATATGTAAATGaa                                                                                     <  1:5208909/125‑1 (MQ=25)
                                             tatcTTTTTCATTATACACACACATTATTAAAAAATTAAATAATTTTTAAATACGATTCAAAACATATATATCATACATTAAT‑‑TATATATATATATATATATATATATAATGCAATATGTTAATGaaa                                                                                    <  2:4846149/125‑1 (MQ=37)
                                              aaCTTTTTCATATAACACACACAATATAATAAAATAAAATAATTGTTAAATAATATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATAATGCAATATGTAAATGAAAATATg                                                                               <  1:2812864/128‑1 (MQ=255)
                                               aCTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCTATATGTAAATTAAAatat                                                                                >  1:6840803/1‑128 (MQ=255)
                                               aCTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATTTAAATGAatatat                                                                                >  2:2251908/1‑128 (MQ=255)
                                               aCTTTTTCAATTTAAACACAACTTATTATAAAATAAAATACTTGTTAAATAAGATTAAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAatat                                                                                <  2:6848333/128‑1 (MQ=255)
                                                         tttACACACCCCTTATTAAAAAATAAAATACTTGTTACATACTATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATTCAATATTTAAAATAAAATATGGTATAATAg                                                                      >  1:2209524/1‑128 (MQ=255)
                                                         tttAAACACATCTTATTATAAAATAAAATAAATTTTTCATAATATTAAAAAAATATATATAATATATTCAT‑‑TATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTataat                                                                        <  2:912328/128‑1 (MQ=25)
                                                            atatactcattattaAAAAATAAAATAATTGTTATATACTATTAAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCaa                                                                   <  2:3348461/119‑1 (MQ=255)
                                                            acacacacCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATATAATCCAATATGAAAATGAAAATATGATATAAAAGc                                                                     >  2:1320911/1‑128 (MQ=39)
                                                            acacacCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATATA‑‑GAAATATATAAAAGAAAATATTTAataatataaa                                                                   >  1:1400277/1‑124 (MQ=255)
                                                            acacacCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAAAGAAAATATTTTATAATATCaa                                                                   >  1:3413234/1‑128 (MQ=255)
                                                               cacaCCTTATTATAAAATAAAATACTTGTTACATACTATTCAAAACATATATAAAATACATTAT‑‑TTATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCg                                                                <  2:6397038/128‑1 (MQ=255)
                                                               cacCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatatatatataa                                                                                                        >  1:3975593/1‑89 (MQ=255)
                                                               aacacattattaAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑TATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTta                                                            <  2:3226203/122‑1 (MQ=255)
                                                                 ccccTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATAAAAAGCAATATTTATATTAAAATATTTTataaaataaaactta                                                              >  2:2586983/1‑117 (MQ=255)
                                                                    catataaAATAATAAATAAATTGTTAGAAACGATTTAAAACATATATAACATAAATTCT‑‑TTATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTtat                                                           <  2:1976433/126‑1 (MQ=255)
                                                                      tattaAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATTAAAATATGGTATAATAGCAACCTTTtatat                                                         >  2:4736056/1‑127 (MQ=255)
                                                                      tattaAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAg                                                       <  1:2445238/128‑1 (MQ=255)
                                                                      tattaAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCA‑‑TAATATATATATATATATATATATAATACAATATTTATATTAAAATATGATATAAAAGCACCCGTTTATaa                                                         >  2:3897755/1‑128 (MQ=255)
                                                                        ttaAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATATAATTCAATATTTAAAAGAAAATATGTTATTATAGAAACATTTTATaa                                                         >  1:6562042/1‑128 (MQ=38)
                                                                         taAAAAATAAAATACTTGTTATATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATaaa                                                        <  2:4461499/128‑1 (MQ=255)
                                                                         taAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATAATAA‑‑‑AATATATATAATAAAATATTTTATATTAGAAACATTTTATAAAATaa                                                    >  1:2987274/1‑128 (MQ=255)
                                                                                taaaataCTTTTTACATACTATTTAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTaaaaaaa                                               <  2:5050082/128‑1 (MQ=255)
                                                                                taaaataATTGTTAGATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑‑‑‑‑TATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAat                                       <  1:4829079/128‑1 (MQ=255)
                                                                                taaaataATTGTTACATAAGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTaaaaaaa                                               <  1:4546383/128‑1 (MQ=255)
                                                                                     taCTTTTTAAATAAGATTAAAAAAATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTaaa                                        <  2:1667028/128‑1 (MQ=255)
                                                                                     taCTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATTCAATATAAAAATGAAAATATAATATAATAGAAAAAGTTTATAAATTAAAAAAATAgaa                                          >  2:5942164/1‑126 (MQ=255)
                                                                                      aCTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATATCAACAGTTTATAAAGTaaaaaatattaaa                                         >  2:4202625/1‑121 (MQ=255)
                                                                                          gTTAAATAAGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAatat                                     <  2:5326298/128‑1 (MQ=255)
                                                                                           ttACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTAAAATTCCAACAGTTTATAAAGTAAAAAAATACtatata                                      >  2:1065784/1‑128 (MQ=39)
                                                                                            tACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATTCAATATGTAAATGATAATATTGTATAATAGCAACAGTTTATAAAGTAAAAAAATAGTAAATAtac                                   >  1:3679507/1‑128 (MQ=255)
                                                                                            tACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGAAATATCTAAATGAAAATATTTTATAATAGAAAAAGTATATAAAGTAAAAAAATATTAAAAAtac                                   >  2:6713404/1‑128 (MQ=255)
                                                                                            tACATAATAATCAAAACATATATAACATACATTTAT‑‑TTTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATAtac                                   <  2:6096792/128‑1 (MQ=255)
                                                                                             aCATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATTCAATATTAAAATTAAAATATTTTATAATATCAAACTTTTATAAATTAAAAAAATATTAAAtataat                                  >  2:650327/1‑126 (MQ=255)
                                                                                              cATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATTGTATAATAGCAACCGTTTATATAGTAAAAAAATAGTAAATAtacta                                 >  2:813084/1‑128 (MQ=255)
                                                                                              cATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGTTATAATAGCAAACTTTTATAAAGTAAAAAAATATTATATAtacta                                 >  1:2313618/1‑128 (MQ=255)
                                                                                              cATAAGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑TATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTa                             <  2:4959041/128‑1 (MQ=255)
                                                                                               aTACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATTCAATATGTAAATGAAAATATGGTATAATAGCAACAGTTTATAAAGTAAAAAAATAATAAATAtactac                                >  1:6435955/1‑128 (MQ=255)
                                                                                                 aCGATTCAAAAAATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTAt                            <  2:4620507/128‑1 (MQ=255)
                                                                                                  cGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATTGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTa                             >  1:5969831/1‑128 (MQ=255)
                                                                                                   gATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATATCAACCTTTTATAAAGTAAAAAAATAGTAAATATACTAattatta                          >  1:1477244/1‑127 (MQ=255)
                                                                                                     ttaaaaaaaTTTATAAAATAAATTCAT‑‑TATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTAt                            <  2:4311334/125‑1 (MQ=39)
                                                                                                      taaaaaCAAATATAAAAGATATTAT‑‑TAATATATATATATATATATATATAATGCAATATGTAATTGAAAATATTGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTa                         <  1:6104042/126‑1 (MQ=255)
                                                                                                      tCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATAT‑‑TGATATATATATATGATAATATTTTATAATATAAACAGTTTATATATTATAAATATATAAAAtataaaaaatattta                         >  1:6725134/1‑117 (MQ=255)
                                                                                                         aaaCATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTATATGAAAATATGGTATAATAGCAACAGTTTATAAAGTAAAAAAATAGTAAATATAATTCTTATTAACta                      >  1:5323828/1‑128 (MQ=255)
                                                                                                         aaaCATATATAACATAAATTCA‑‑ATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACta                      <  1:4315742/128‑1 (MQ=255)
                                                                                                           aCATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACtaat                    <  1:6628614/128‑1 (MQ=255)
                                                                                                           aCATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACAGTTTATAAAGTAAAAAAATAATAAATATAATAATTATTAACtaataa                  >  2:3769324/1‑128 (MQ=255)
                                                                                                              tatataACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATTTAAATGAAAATATTGTATAATAGCAACCTTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATaaa                 >  1:4936603/1‑128 (MQ=255)
                                                                                                              tatataACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATaaa                 >  1:1704927/1‑128 (MQ=255)
                                                                                                              tatataACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGAAATATGTAAATGAAAATATTGTATAATAGCAAAAGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATATAAAAATaaa                 >  1:3819206/1‑128 (MQ=255)
                                                                                                                tataACATACATTCAT‑‑TATATATATATATATATATATAAATA‑‑‑‑AATATGTAAAAGAAAATATGATATTATACCAACAGTTTATAAAATAAAAAAATAATAAATATAATACTTTATAAATAAAAAAATCt             >  2:1849731/1‑128 (MQ=255)
                                                                                                                tataACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATTGTAAATATACTACTTATTTACTAATAAAAt               >  2:4067145/1‑128 (MQ=255)
                                                                                                                 ataACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATTAAAATATTGTATAATAGCAACCGTTTATAAATTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATc              >  2:659265/1‑128 (MQ=255)
                                                                                                                  taACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTATATATACTACTTATTTTCTAATAAAAtat             >  2:1416773/1‑126 (MQ=255)
                                                                                                                  taACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTAt           <  2:2971571/128‑1 (MQ=255)
                                                                                                                   aaCATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATTTGTAAATGAAAATATGTTATAATAGCAACAGTTTATAAATTAAAAAAATATTAAATATAATAATTATTTAATAATAAAATCTa            >  1:4685449/1‑128 (MQ=255)
                                                                                                                   aaCATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATATAAATGAAAATATTGTATAATAGCAACCGTTTATAAATTAAAAAAATAGTAAATATAATAATTATAAAAAAATAAAAtata            >  2:1512140/1‑128 (MQ=255)
                                                                                                                    acatacatTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTAt           >  1:945929/1‑128 (MQ=255)
                                                                                                                    acatacatTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAAAGAAAATATGGTATAATAGCAACCTTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTAt           >  2:3452053/1‑128 (MQ=255)
                                                                                                                     catacatTCATTATATATATATATATATATATATATATAATTCAATATGTAAATGAAAATATGTTATAATAGCAACATTTTATAAATTAAAAAAATAATAAATATACTAATTATTTAATAATAAAATc              >  1:1593160/1‑128 (MQ=255)
                                                                                                                       tacatTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATATCAACCTTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAATATATAtttt        >  1:2911696/1‑128 (MQ=255)
                                                                                                                        acatTCAT‑‑TATATATATATATATATATATATAAAGAAATATAAAAATAAAAATATTTTATAATAGAAACATTTTATAAAATAAAAAAATATTAAATATAATAAATTTTAAAATAAAAAATCTAtttat       >  2:5440211/1‑126 (MQ=255)
                                                                                                                        acatTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTAttttt       >  2:2434569/1‑128 (MQ=255)
                                                                                                                               t‑‑tATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATTGTATAATAGAAACAGTTTATAAAGTAAAAAAATATTAAATAAAATAATTATTTACTAATAAAATATATAtatattta  >  2:525136/1‑128 (MQ=255)
                                                                                                                               |                                                                                                                                 
TGTACCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTA  >  CP016816/311021‑311275

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.