New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 437885 =1838 (0.590)108 (0.040) 64/202 52.1 7.0% intergenic (‑189/+233) JCVSYN2_01985/JCVSYN2_01990 glycosyl transferase/ABC transporter permease
?CP016816 = 437880 1399 (0.550)intergenic (‑184/+238) JCVSYN2_01985/JCVSYN2_01990 glycosyl transferase/ABC transporter permease
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 1950 total aligned reads displayed.

CTTATTTTTGTAGTTGTAAGTTTCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑TTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTT  >  CP016816/437758‑438012
                                                                                                                                        |                                                                                                                               
 ttATTTTTGTAGTTGTAAGTTTCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑TTAAT‑‑G‑‑‑‑atatat                                                                                                                                <  1:2417121/128‑1 (MQ=255)
   aTTTTTGTAGTTGTAAGTTTCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTATTAAATGAAGCAAAGCAAAAACCTCCATATTACCTATATAG‑‑ATACT‑‑G‑‑‑‑atatatat                                                                                                                              >  1:6700781/1‑128 (MQ=255)
    tttttGTAGTTGTAAGTTTCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑TTAAT‑‑G‑‑‑‑atatatata                                                                                                                             <  1:2305805/128‑1 (MQ=255)
        tGTAGTTGTAAGTTTCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAACGCAAAAACCTCCATATTACCTATAGAG‑‑TTAAT‑‑G‑‑‑‑atatatatagata                                                                                                                         >  2:5742042/1‑128 (MQ=255)
        tGTAGTTGTAAGTTTCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑TTAAT‑‑G‑‑‑‑atatatatatata                                                                                                                         >  1:3296670/1‑128 (MQ=255)
               gTAAGTTTCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑ATAAT‑‑G‑‑‑‑atatatatatatatatatat                                                                                                                  <  1:1969185/128‑1 (MQ=255)
               atAAGATTCATTTTTTAATAAATATTAGAAATAAAAATTTTATTTTTAAAATAAATATTTTATGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑TTAAT‑‑G‑‑‑‑atatatatatatatatata                                                                                                                   <  1:3996505/127‑1 (MQ=255)
                  attttAA‑TTTTTAATAAATATTATATATAAAAATTTTATATTTAAAATAAATATTTTATTAAATGAAGCAAAGCAAAAACCTCGATATTACATATAGAG‑‑TTAAT‑‑t‑‑‑‑atatatatatatatatatatata                                                                                                               <  2:5059452/126‑1 (MQ=255)
                  aGTTTCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑TTAAT‑‑G‑‑‑‑atatatatatatatatatatata                                                                                                               <  2:2679721/128‑1 (MQ=255)
                   gattCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAACAAAAGCAAAAACCTCCATATTACCTATAGAG‑‑TTAAT‑‑G‑‑‑‑atatatatatatatatatatatat                                                                                                              <  1:1417517/126‑1 (MQ=255)
                   gTTTCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑TTAAT‑‑G‑‑‑‑atatatatatatatatatatatat                                                                                                              >  2:6830123/1‑128 (MQ=255)
                    ttttttttttttATAAATATTATATATATAAATTTTTTTTTTAAAATATATATTTTTTTAAATTAATAAAATAAAAAACCTCCATATTATATATAGAG‑‑TTATT‑‑G‑‑‑‑atatatatatatatatatatatat                                                                                                              <  2:2911114/122‑1 (MQ=255)
                    ttttA‑TTTTTAATAAATATAAGAAATAAAAATTGTATTTTTAAAATATATATTTTATTAAATGAATAAAAGCAAAAACCTCAATATTACCTATAGAG‑‑TTAAT‑‑G‑‑‑‑atatatatatatatatatatatata                                                                                                             <  1:6568674/128‑1 (MQ=255)
                       cA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATTAATCAAAGCAAAAACCTACATATTACCTATAGAG‑‑TTAAT‑‑G‑‑‑‑atatatatatatatatatatatatatat                                                                                                          >  2:6338075/1‑128 (MQ=255)
                       cA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑TTAAT‑‑G‑‑‑‑atatatatatatatatatatatatatat                                                                                                          >  1:357815/1‑128 (MQ=255)
                          tttttATTATATATTATATATAAAATTTGTTTTTTTAAAATAAATATTTTTAAAAATGTACAAAATAAAAAAACTAAATATTAACTATAGAG‑‑TTTAT‑‑T‑‑‑‑atatatatatatatatatatatatatatat                                                                                                        <  2:3010525/128‑3 (MQ=255)
                          tttttAATAAATATTATATATAAAAATTGTATTTTTTAAATAAATATTTTAGTAAATGTATAAAATCAAAAAACTCCATATTAACTATAGAG‑‑TTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGc                                                                                                        <  2:1286391/128‑1 (MQ=255)
                           ttttAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACATATAGAG‑‑TTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATgaa                                                                                                       >  2:2044778/1‑126 (MQ=255)
                           atttAATATATATTAGAAATAAAAATTTTATTTTTAAAATAAATATTTTATGAAATTAATCAAATAAAAAACCACAATATTAAATATAGAG‑‑TTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCa                                                                                                       <  2:1060450/127‑1 (MQ=255)
                            tttAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATAATTTAGGAAATGAAGCAAAGCAAAAACCTCCATAAAACATATAAAT‑‑ATAAT‑‑G‑‑‑‑atatatatatatatatatatatataatatcga                                                                                                      >  2:3723584/1‑121 (MQ=255)
                              taataaATATTATAAATAAAAATTTTATTTTTAAAATAAATATTTTATGAAATGAAGCAAAGCAAAAACATCCATATTAACTATAGAG‑‑TTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGa                                                                                                  <  2:4091004/128‑1 (MQ=255)
                                  aaataTTATAAATAAAAATTTTATTTTTAAAATAAATATTTTAGTAAATTAATCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑TTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATc                                                                                                <  2:3929719/128‑1 (MQ=255)
                                   aataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑TTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATAAAATCAAGCGATCa                                                                                               >  2:5867907/1‑128 (MQ=255)
                                    atatTAGATATAAAAATTGTATTTTTATAATAAATATTTTAGGAAATGAAGCAAATCAAAAACCTCCATATTACCTATAGAG‑‑TTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAg                                                                                              <  1:4832259/128‑1 (MQ=255)
                                    atatTAGAAATAAAATTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAATCAAAAACCTCCATATTACCTATAGAG‑‑TTAAT‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATa                                                                                          <  2:1606137/128‑1 (MQ=255)
                                     tatattaaaTATAAATTTTATTTTTTAAATAAATATATTTTGTAATTTAATTAATAAAAAACATCTATATTATATATATAGTTTTATT‑‑T‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCa                                                                                               <  2:3352948/122‑1 (MQ=255)
                                       ttAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAATCAAAAACCTCCATATTACCTATATAG‑‑TTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATA‑AT‑CAAGCTCTCAGCATaa                                                                                         >  1:8377/1‑128 (MQ=255)
                                       ttAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑TTAAT‑‑G‑‑‑‑ATATATATATATATAAATATATATATATGATCGCGATCAGCAt                                                                                           >  1:1664966/1‑128 (MQ=255)
                                        tataaaTAAAAATTTTATTTTTAAAATAAATATTTTATTAAATGTATCAAATCAAAAAACTCCATATTACCTATAGAG‑‑TTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATa                                                                                          <  2:1481961/125‑1 (MQ=255)
                                        tAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑TTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATTCTAGCTATCATCATa                                                                                          >  1:4137978/1‑128 (MQ=255)
                                        tAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑TTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGAGATAAGCATaaa                                                                                        >  2:4178236/1‑128 (MQ=255)
                                           aaaTAAAAATTTTATTTTTAAAATAAATATTTTATGAAATTAATAAAAGAAAAAAACTCCATATTAACTATAGAG‑‑TTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATaaaa                                                                                       <  2:1162357/128‑1 (MQ=255)
                                           aaaTAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑TTAAT‑‑GAT‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATat                                                                                         >  1:2516130/1‑127 (MQ=255)
                                              tAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑TTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATTCAAGCGATCAGCATAAAATgg                                                                                    >  2:3656252/1‑128 (MQ=255)
                                                aaaaTTGTATTTTTTAAAAAAATATTTTATTAAATGAATCAAATAAAAAACATCCATATTAGATATAGAG‑‑ATATT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTg                                                                                  <  2:2537049/128‑1 (MQ=255)
                                                aaaaTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑TTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATA‑‑AAATCTATCATCATAAAATGGTCaa                                                                                >  2:1735854/1‑128 (MQ=255)
                                                aaaaTTGTATTTTTAAAATAAATATTTTAGGAAATGAACCAAAGCAAAAAACTCCATATTACCTATAGAG‑‑TTAAT‑‑GAT‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATgg                                                                                    <  1:1164027/128‑1 (MQ=255)
                                                  aaTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑TTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAAt                                                                              <  2:5585943/128‑1 (MQ=255)
                                                    ttttATTTATAAAATAAATATTTTAGTAAATGAAGCAAAGCAAAAACCTACATATTACCTATAGAG‑‑TTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAAt                                                                              <  2:3832077/125‑1 (MQ=255)
                                                     tGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑TTTAT‑‑G‑‑‑‑ATATATATATATATATATATATATATAAGCAATCGATCAACAAAAAATTGTTATAtt                                                                             >  2:4325165/1‑128 (MQ=255)
                                                      gTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑TTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGAAAGCGATCAGCATAAAATTGAGAAAttt                                                                            >  1:5657409/1‑128 (MQ=255)
                                                       tATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑TTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGAAAGCGATCATCATAAAATggattaatata                                                                           >  2:6719609/1‑119 (MQ=255)
                                                       tATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑TTAAT‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGATATATAGATc                                                                       >  1:5137632/1‑128 (MQ=255)
                                                        aTTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑TTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATTCAAGAGATCAGCATAAAATGGAGAGAtcgga                                                                          >  1:369108/1‑124 (MQ=255)
                                                         tttttAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑TTAAT‑‑GAT‑‑ATATATATATATATATATATATATATATGAAAGCGATAAGAATAAAATAGTAAAATTTa                                                                           >  1:20907/1‑128 (MQ=255)
                                                          ttttAATATAAATATTTTAGGAAATTTAGCAAAGAACTAACCTACATATTACATATAGAG‑‑TTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCt                                                                      <  2:4476318/128‑1 (MQ=255)
                                                            ttAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑TTAAT‑‑GAT‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGAt                                                                        <  2:2321205/128‑1 (MQ=255)
                                                            ttAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACATCCATATTACCTATAGAG‑‑TTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATAATAAAGATATCAGAATAAAATTTTTAAAttaatatat                                                                      >  1:3836337/1‑121 (MQ=255)
                                                             tAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑TTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCGAGAGATCAGAATAAAATGGTCAAATAGAGATCTGat                                                                   >  2:5975900/1‑127 (MQ=255)
                                                              ataatatataTTATAGTAAATGAATAAAAGAAAAAACCTCTATATTAACTATATAG‑‑TTTAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGa                                                                    <  1:2787245/126‑1 (MQ=255)
                                                              aaaaTAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑TTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATCCTCGAGATCAGAAAAATATTGTGATATTTATATCAGa                                                                    >  2:6065939/1‑128 (MQ=255)
                                                                aataaataTTTTATGAAATAAAGATAAACAAAAAAATCTATATTAAAAATAGAG‑‑TTAAT‑‑‑‑‑‑‑‑TATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTg                                                                <  1:5946832/128‑1 (MQ=255)
                                                                 atatatatTTTAGGATATGAATAAAAGAAAAAACCTCAATATTACCTATAGAG‑‑TTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGtt                                                                 <  1:1000903/128‑1 (MQ=255)
                                                                    aataTTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑TTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGAAATCTCTCAGCATAAAATGTTTAAATTTAGATCTGAGTTTGt                                                              >  1:2912913/1‑128 (MQ=255)
                                                                     atatTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑TTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGAAAGCGATCAGCATAAAATGGTGAAATATAGATCTGAGTTTGTc                                                             >  2:4773529/1‑128 (MQ=255)
                                                                      tatTTTATGAAATGAATCAAAGAAAAAACATCCATATTACCTATATAG‑‑TTAAT‑‑GATATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTg                                                                <  2:797147/128‑1 (MQ=255)
                                                                        ttttagtttattaagaaaatcaAAAAAATCTATATTATCTATAGAG‑‑ATAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTa                                                          <  1:6445339/116‑1 (MQ=255)
                                                                        ttttAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑TTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTaaa                                                        <  2:2424190/128‑1 (MQ=255)
                                                                           tatgataagactcaaagaacaAACCTCAATATTACCTATAGAG‑‑TTATT‑‑T‑‑‑‑ATATATATCTATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAAt                                                       <  1:3896519/116‑1 (MQ=255)
                                                                             ggAAATGAAGCAAAGCAAAAACCTCCATATAACCTATAGAG‑‑ATAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGt                                                   <  1:3047747/128‑1 (MQ=255)
                                                                             ggAAAATAAGCAACACAAAAAAATCCATAATAACTATATAG‑‑TTATT‑‑‑‑‑‑‑‑TATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGt                                                   <  1:3425636/128‑1 (MQ=255)
                                                                              taaaTGAAACAAAGCAAAAAACTCAAAATTAAATATAGAG‑‑TTATTTAT‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAAtt                                                      <  1:1293865/127‑1 (MQ=255)
                                                                               aaaTCAATCAAAGTAAAAACCTCTATATTAACTATAGAG‑‑TTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGt                                                   <  1:4345085/128‑1 (MQ=255)
                                                                                 attaatcaaagcaaaAACCTCTATATTACCTATAGAG‑‑TTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGtt                                               <  1:931128/122‑1 (MQ=255)
                                                                                       caaaggaaaAAAATCAATATTACATATAGAG‑‑TTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGGCTTAAATTTGTAGTTttta                                           <  1:4474427/128‑1 (MQ=255)
                                                                                       caaagcaaaAACCTCCATATTACCTATAGAG‑‑TTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATTGTGAAATATAGATCTGAGTTGTTCTTAAATTTGTAGTTttta                                           >  1:2620689/1‑128 (MQ=255)
                                                                                           gcaaaAACCTCCATATTACCTATAGAG‑‑TTAAT‑‑GAT‑‑ATATATATATATATATATATATATATATTCTAGCTATCAGAATAAAATGGTGATATTTATATCTGATTTGGTCTTATATTTTTAGTTtttatt                                         >  2:916513/1‑128 (MQ=255)
                                                                                           gcaaaAACCTCCATATTACCTATAGAG‑‑TTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCACGCTCTCAGCATAATATTGTGAAATATAGATCTGACTTGGTATTATATTTGTAGTTtttattta                                       >  1:4243535/1‑128 (MQ=255)
                                                                                           gcaaaAACCTCCATATTACCTATAGAG‑‑TTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGAGCAGCATAAAATGGTGAAATTTAGCTCTGAGTTGGTCTTATATTTGTAGTTtttattta                                       >  2:5339890/1‑128 (MQ=255)
                                                                                            ctcttgagatcttatTAGCTATAGAG‑‑TTAAT‑‑T‑‑‑‑ATATATATATATATATATATATATATATGCAAGAGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTttatttat                                      <  1:4970014/116‑1 (MQ=255)
                                                                                            caaaAAACTCCATATTAAATATAGAG‑‑TTAAT‑‑‑‑‑‑‑‑TATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAg                                    <  2:5228645/128‑1 (MQ=255)
                                                                                             aaaaaCCTCCATATTACCTATAGAG‑‑TTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTtata                                     >  1:2202422/1‑128 (MQ=255)
                                                                                              aaaaCATCTATATTAACTATATAG‑‑TTAAA‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAg                                    <  2:5471007/128‑1 (MQ=255)
                                                                                                 aCCTCCATATTACCTATAGAG‑‑TTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGAAAGCGATCAGAATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTTTTTATAGttt                                 >  2:3528949/1‑128 (MQ=255)
                                                                                                   cTCCAAATTAGCTATAGAG‑‑ATATTCAT‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGttt                                 <  2:2161559/128‑1 (MQ=255)
                                                                                                   atCCATATTAACTATAGAG‑‑TTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTtat                               <  1:5266508/127‑1 (MQ=255)
                                                                                                     ccATATTACCTATAGAG‑‑TTAAT‑‑G‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGTTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTtaa                       >  1:716761/1‑128 (MQ=255)
                                                                                                      cATATTACCTATAGAG‑‑TTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGAATAAAATGGTGAAATTTATATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATaaa                            >  1:3205082/1‑128 (MQ=255)
                                                                                                      cATATAATCTATAGAG‑‑ATAAT‑‑GAT‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTtata                              <  1:6164681/128‑1 (MQ=255)
                                                                                                       atatTACCTATAGAG‑‑TTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATTGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATaaat                           >  2:3118480/1‑127 (MQ=255)
                                                                                                       atatTACCTATAGAG‑‑TTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATATAGtt                         >  1:1842536/1‑128 (MQ=255)
                                                                                                          ttACCTATAGAG‑‑TTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTta                        <  1:5509070/128‑1 (MQ=255)
                                                                                                          ttAACTATAGAG‑‑TTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTta                        <  1:1532866/128‑1 (MQ=255)
                                                                                                           tagcTATAGAG‑‑TTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTtaa                       <  2:4920774/125‑1 (MQ=255)
                                                                                                           tACATATAGAG‑‑TTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTtaa                       <  1:6043910/128‑1 (MQ=255)
                                                                                                             ccTATAGAG‑‑TTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTaataat                   >  1:5835098/1‑128 (MQ=255)
                                                                                                              cTATAGAG‑‑TTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTtaataa                    <  2:2799019/128‑1 (MQ=255)
                                                                                                                 taGAG‑‑TTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATTGTGAAATTTATATCTGAGTTTGTCTTAAATTTGTATTTTTTATTTATATTTTATATAGATAATAAttt                 >  2:1374962/1‑128 (MQ=255)
                                                                                                                  agag‑‑TTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTATATTTGTAGTTTTTATTTATATTATATATAGTTAATAATTTa                >  2:6435086/1‑128 (MQ=255)
                                                                                                                        ttAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAtt            >  1:4672060/1‑128 (MQ=255)
                                                                                                                            atttacttatatatatatatatatatatatatatatGCAAGTGATCATCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGa              <  2:6184357/120‑1 (MQ=255)
                                                                                                                            atagatatatatatatatatatatatatatatatatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGa              <  2:6581495/120‑1 (MQ=255)
                                                                                                                                tgatatatatatatatatatatatatatatatGCAATCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATATTTTATATATTTAATAATTTAGAtttt          >  2:3225808/5‑128 (MQ=255)
                                                                                                                                tgatatatatatatatatatatatatatatatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTTTAGTTTTTATTTATAGTTTATAAATTTAATAATTTAGAtttt          >  1:6334903/5‑128 (MQ=255)
                                                                                                                                 taatgatatatatatatatatatatatatatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAgtttt         <  1:6806293/123‑1 (MQ=255)
                                                                                                                                  atatatatatatatatatatatatatatatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTa        >  2:3988957/3‑128 (MQ=255)
                                                                                                                                    atatatatatatatatatatatatatatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAat      <  1:4563122/128‑1 (MQ=255)
                                                                                                                                     tatatatatatatatatatatatatatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATATTTTATAAAGTTAATAATTTAGATTTTTAata     >  2:1924382/1‑128 (MQ=255)
                                                                                                                                      atatatatatatatatatatatatatGCAAGCGATCAGCATAAAATGGTGAAATTTATATCTGAGTTTGTCTTAAATTTTTAGTTTTTATTTATATTTTATAAAGTTAATAATTTAGAtttattattt    >  1:5375388/1‑121 (MQ=255)
                                                                                                                                        atatatatatatatatatatatatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGt                                                   <  2:460693/79‑1 (MQ=255)
                                                                                                                                        |                                                                                                                               
CTTATTTTTGTAGTTGTAAGTTTCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAG‑‑TTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTT  >  CP016816/437758‑438012

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.