BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP016816	= 437880	867 (0.360)	597 (0.200) +ATAT	102/186	31.6	34.2%	intergenic (‑184/+238)	JCVSYN2_01985/JCVSYN2_01990	glycosyl transferase/ABC transporter permease
*	?	CP016816	437881 =	1254 (0.400)	597 (0.200) +ATAT	102/186	31.6	34.2%	intergenic (‑185/+237)	JCVSYN2_01985/JCVSYN2_01990	glycosyl transferase/ABC transporter permease
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 1905 total aligned reads displayed.

GAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAAT  >  CP016816/437754‑438008

gAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑a                                                                                                                                 >  1:1159991/1‑128 (MQ=255)

 aaaCTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTTTATTTTTAAAATAAATATTTTATTAAATGAATCAAATCAACAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑at                                                                                                                                >  1:6557150/1‑128 (MQ=255)

      tATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACATCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatata                                                                                                                           >  2:6055550/1‑128 (MQ=255)

      tATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGAAATAACCTCCATATTACATATAGAGTTAAT‑‑G‑‑‑‑atatata                                                                                                                           >  1:363692/1‑128 (MQ=255)

        tttttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatata                                                                                                                         >  1:5359589/1‑128 (MQ=255)

        tttttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTACATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatata                                                                                                                         >  1:3789322/1‑128 (MQ=255)

             gTAGTTGTAAGTTTCATTTTTAATAAATATTTCAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatat                                                                                                                    <  2:4943101/128‑1 (MQ=255)

               atttGTAAGTTTGATTTTTAATATATATAATATATAAAAAATTTATTTTTAAAATAAATATTTTATTAAATTAAGCAAATAAAAAAACTCCATATAACCACTAGAGTTAAT‑‑G‑‑‑‑atatatatatatatat                                                                                                                  <  1:455700/126‑1 (MQ=255)

               aGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTATGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatat                                                                                                                  >  2:1052307/1‑128 (MQ=255)

                 ttGTTATTTTCATTTTTAATAAATATTAGAAATATAAATTGTATTTTTAAAATATATATTTTATGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatat                                                                                                                <  2:1475155/128‑1 (MQ=255)

                  ttttaGTTTAATTTTTAATAAATATTATAAATAAAAATTGTATTTTTAAAATAAATATTTTATTAAATGAATCAAAGAAAAAAACTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatata                                                                                                               <  2:2758196/124‑1 (MQ=255)

                  tGTAATTTTCATTTTTAATAAATATTATAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGAAAAGAAAAAAACTCAATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatata                                                                                                               <  2:5738661/128‑1 (MQ=255)

                  tGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATTAAGCAAATCAAAAACATCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatata                                                                                                               >  2:3008639/1‑128 (MQ=255)

                   ttAATTTTCATTTTTAATAAATATTAGAAATTAAAATTTTATTTTTAAAATAAATATTTTAGTAAATGAAGAAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatcatt                                                                                                              <  2:4312721/127‑5 (MQ=255)

                   gTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatat                                                                                                              >  2:1601830/1‑128 (MQ=255)

                    tAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatata                                                                                                             >  1:288226/1‑128 (MQ=255)

                    tAAGTTTCA‑TTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATTAAGCAAAGCAAAAACCTCCATATTACCTATAGAGATAAT‑‑G‑‑‑‑atatatatatatatatatatat                                                                                                            <  1:2257788/128‑1 (MQ=255)

                    tAAGTTTAATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGCAAATGAAGCAAACCAAAAACCTCCATAATACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatata                                                                                                             <  1:2717774/128‑1 (MQ=255)

                      aGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatatata                                                                                                           >  1:481906/1‑128 (MQ=255)

                      aGTTTAAATTTTATTAAATATTAGATATAAAAATTTTATTTTTAAAATATATATTTTTTTATATTAAGCATATATAAAAAATCAATATAATATATTGTGTTTAT‑‑G‑‑‑‑atatatatatatatatatttata                                                                                                           <  2:4476706/128‑1 (MQ=255)

                       gTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatatatat                                                                                                          >  2:6830123/1‑128 (MQ=255)

                        tttCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatatgcaag                                                                                                         <  2:3199417/128‑6 (MQ=255)

                         ttCATTTTTAATATATATTATAAATAAAAATTTTTTTTTTAAAATAAATATTTTAGGAAATGAAGCAAATCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatatatgcaa                                                                                                        <  2:1372647/128‑5 (MQ=255)

                         ttCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAATCAAAGCAAAAACCACCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatatatatat                                                                                                        >  2:1255079/1‑128 (MQ=255)

                           cATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATTAATCAAAGCAAAAACCTACATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatatatatatat                                                                                                      >  2:6338075/1‑128 (MQ=255)

                               tttAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAACAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATAAATCCac                                                                                                  >  2:3116670/1‑127 (MQ=255)

                               tttAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatatatatatataaaa                                                                                                  >  2:5328807/1‑124 (MQ=255)

                               tttAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCaa                                                                                                  >  2:3711591/1‑128 (MQ=255)

                                ttAATAAATATTAGATATATAAATTGTATTTTTTAAATAAATATTTTATGAAATGAATCAAAGCAAAAAACTCCATATTAACTATAGAGTTAAT‑‑T‑‑‑‑ATATATATATATATATATATATATATATGCAAg                                                                                                 <  2:6691160/128‑1 (MQ=255)

                                ttAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCaat                                                                                                 >  2:3924384/1‑127 (MQ=255)

                                   ataaataTTAGAAATATAAATTTTATTTTTATAATAAATATTTTATGTAATTAATCAAATAAAAAACCTCCATATTAACTATAGAGTTATT‑‑G‑‑‑‑ATATATATATATATATATATATATATTTGCAAGCGa                                                                                              <  2:59443/128‑1 (MQ=255)

                                    taaataTTATAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAAGCAAATCAAAAAACTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGAt                                                                                             <  1:712076/128‑1 (MQ=255)

                                     aaataTTATAAATAAAATTTTTTTTTTTAAAATATATATTTTATGAAATGAATCAAAGAAAAAACCTACATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAg                                                                                          <  2:3624450/128‑1 (MQ=255)

                                     aaataTTATAAATAAAAATTTTATTTTTAAAATAAATATATTATTAAATTAATAAAAGAAAAAAAATCAATATTACCTATAGAGATAAT‑‑G‑‑‑‑atatatatatatatatatatatatatatatatatatat                                                                                            <  2:1159497/128‑11 (MQ=255)

                                     aaataTTAGAAATAAAAATTTTATTTTTAAAATAAATATTTTAGTAAATGAATCAAATCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑‑‑‑‑TATATATATATATATATATATATATATGCAAGCGATCAg                                                                                          <  1:151488/128‑1 (MQ=255)

                                      aataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGCAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑AGATATAAATATATCTATAGATATATCTGCCAGCGAGCa                                                                                           >  2:2037173/1‑128 (MQ=255)

                                        tatTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATGCACGCGATCAGCATaa                                                                                     >  2:408274/1‑128 (MQ=255)

                                          ttAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑GAT‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGc                                                                                         <  1:6685437/128‑1 (MQ=255)

                                           tataaaTAAAAATTGTATTTTTAAAATAAATATATTATTAAATGAAGAAAAGCAAAAAACTCAATATTAACTATATAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATa                                                                                      <  1:2991053/125‑1 (MQ=255)

                                           tAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGAGATAAGCATaaa                                                                                    >  2:4178236/1‑128 (MQ=255)

                                            aGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCTATCAtaataa                                                                                     >  2:3327165/1‑128 (MQ=255)

                                            aGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATaa                                                                                     >  2:5214012/1‑128 (MQ=255)

                                             gAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCGAGCTATCAGCAaaaa                                                                                    >  2:398467/1‑128 (MQ=255)

                                             gAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCACGCGATCAGAATata                                                                                    >  2:3476381/1‑126 (MQ=255)

                                             gAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGAAAAAACCTCCATATTAACTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATaaa                                                                                    <  1:5122797/128‑1 (MQ=255)

                                                 tAAATATTGTATTTTTATAATATATATTTTAGGATTTTAATAATATAAATAAAGTCTATATTAACTATAGAGTTTAT‑‑G‑‑‑‑ATATATATAT‑T‑TATTTATATTTATATGCAAGCGATCAGCATAAATTGGTg                                                                              <  1:5646840/128‑1 (MQ=255)

                                                 tAAAAATTGTATATTTAAAATAAATATTTTAGGAAATGAAGCAAAGAAAAAACCTCCATATTACCTATAGAGTTAAT‑‑GATATATATATATATATATATATATATATATATGCAAGCGATCAGCATaaa                                                                                    <  1:2479273/128‑1 (MQ=255)

                                                  aaaaaTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGATAGCGATCATAATAAAAttga                                                                               >  2:5064290/1‑125 (MQ=255)

                                                   aatattttattttTAAAATATATATTTTATTATATTAATCAAAGAAAAAAACTCCATATTAACTATAGAGTTAAT‑‑T‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTg                                                                              <  1:191922/125‑1 (MQ=255)

                                                       ttttATTTATAAAATAAATATTTTAGTAAATGAAGCAAAGCAAAAACCTACATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAAt                                                                          <  2:3832077/125‑1 (MQ=255)

                                                        tGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCTACATAATATGGTGAAAtt                                                                         >  1:3383468/1‑128 (MQ=255)

                                                          tATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGATATCGATAAGAATAATATTTTGAAATTTa                                                                       >  1:4334945/1‑128 (MQ=255)

                                                           aTTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAg                                                                      >  1:67819/1‑128 (MQ=255)

                                                           aTTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATATAGATCt                                                                  >  1:5791834/1‑128 (MQ=255)

                                                                 aaaaTAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATAAGAATAATATGGTGATATTTAGATCTGa                                                                >  2:6181237/1‑128 (MQ=255)

                                                                  aaataaatATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGtt                                                             >  1:2034829/1‑128 (MQ=255)

                                                                   aataaataTTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCTATCAGCATAAAATGGTTAAATTTATATCAGatt                                                              >  1:4668226/1‑126 (MQ=255)

                                                                    atatatatTTTAGGATATGAATAAAAGAAAAAACCTCAATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGtt                                                             <  1:1000903/128‑1 (MQ=255)

                                                                       aataTTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATAGATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGt                                                          >  2:5461847/1‑128 (MQ=255)

                                                                        atatTTTTGGAAATGTAGCAAATCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAAT‑GTGAAATTTAGATCTGAGTTGGTCt                                                        <  2:172792/128‑1 (MQ=255)

                                                                        atatTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑GATATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGTTTATATTTATATCTGAGtt                                                             >  1:2564459/1‑128 (MQ=255)

                                                                         tatTTTATGAAATGAATCAAAGAAAAAACATCCATATTACCTATATAGTTAAT‑‑GATATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTg                                                            <  2:797147/128‑1 (MQ=255)

                                                                          atTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTaa                                                     <  1:6442071/128‑1 (MQ=255)

                                                                          atTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTaa                                                     >  2:5833756/1‑128 (MQ=255)

                                                                            tttAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATTATAGCGATAAGAATAAAATTGTGAAATTTATATCTGAGTTGTTATTaa                                                     >  1:387969/1‑128 (MQ=255)

                                                                             tttgtaaaTCAAGCAAATATAAAAACTCCATATATCCTATAGAGTTAAT‑‑T‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTaaa                                                    <  2:4788654/123‑1 (MQ=255)

                                                                              tAGGATATGAAGCAAAGCAATAACCTCCATATTACATATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGt                                               <  1:2174987/128‑1 (MQ=255)

                                                                               aGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑GAT‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGTTGAAATTTAGATCTGAGTTGGTCTTaaa                                                    >  1:3488358/1‑128 (MQ=255)

                                                                                   aaTGATGCAAATCAAAAATCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTa                                              <  1:3262361/128‑1 (MQ=255)

                                                                                      gAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCTATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGtt                                           >  1:3962958/1‑128 (MQ=255)

                                                                                            aagcaaaAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTtttatt                                     <  1:926435/128‑1 (MQ=255)

                                                                                              gcaaaAACCTCCATATTACCTATAGAGTTAAT‑‑GAT‑‑ATATATATATATATATATATATATATATTCTAGCTATCAGAATAAAATGGTGATATTTATATCTGATTTGGTCTTATATTTTTAGTTtttatt                                     >  2:916513/1‑128 (MQ=255)

                                                                                               caaaAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAg                                >  1:181013/1‑128 (MQ=255)

                                                                                               aaaaaaCCTCCATAATAGCTATAGAGTTACT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTttatttat                                  <  1:4453622/127‑1 (MQ=255)

                                                                                                 aaaaCCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCTATCAGAATAAAATGGTGAAATTTAGATCTGAGTTTGTCTTAAATTTGTATTTTTTATTtatat                                >  2:1918030/1‑127 (MQ=255)

                                                                                                  aaaaatacATATTAAATATAGAGTTAATTAT‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTtata                                 <  2:2666288/121‑1 (MQ=255)

                                                                                                    aCCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATTCAAGCGATCAGCATAATATGGTGAAATTTATATCTGAGTTTTTCTTAAATTTATAGTTTATATTTAGAGtat                             >  1:1652585/1‑126 (MQ=255)

                                                                                                     ccTCCATATTACCTATAGAGTTAAT‑‑GAT‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGtt                              >  1:1398090/1‑128 (MQ=255)

                                                                                                      cttcATATTACATATAGAGTTAAT‑‑T‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTtat                           <  1:548721/125‑1 (MQ=255)

                                                                                                      cTCCATAATACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTtat                           <  1:6010519/128‑1 (MQ=255)

                                                                                                      cTCCAAATTAGCTATAGAGATATTCAT‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGttt                             <  2:2161559/128‑1 (MQ=255)

                                                                                                       tCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATAT‑T‑CAAGAGATCATCATAAAATGTTGAAATATAGATCTGAGTTGGTCTTAAATTTCTAGTTTTTATTTATATTATATaaa                        >  1:2378027/1‑128 (MQ=255)

                                                                                                             ttACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATATAATGGTGAAATTTAGATCTGAGTTTGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTta                    <  1:1255079/128‑1 (MQ=255)

                                                                                                             ttACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATAAGAATAAAATGGTGAAATATAGATCTGAGTAGGTCATAAATTTGTTGTTTTTATTTATTGTATATAAAGTta                    >  2:2439842/1‑128 (MQ=255)

                                                                                                             ttACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGAGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTTGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTtaat                  <  1:4233928/128‑1 (MQ=255)

                                                                                                             taaCCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTtaat                  <  1:4951492/126‑1 (MQ=255)

                                                                                                              tACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGATATTTAGATCTGTGTTGGTCTAAAATTTGTATTTTTTATTTATATTTTATAAATTtaa                   >  2:5583221/1‑128 (MQ=255)

                                                                                                                 cTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAATTtaataa                >  1:5246733/1‑128 (MQ=255)

                                                                                                                 cTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATACATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTa            <  2:4637548/128‑1 (MQ=255)

                                                                                                                    taGAGTTAAT‑‑G‑‑‑‑ATATTTATATATATATATATATATATATGCAAGCGATCAGCATAAAATTGTGAAATTTAGATCTGAGTTGGTCTTAAATTTTTAGTTTTTATTTATAGTTTATAAAGTTAATAAttt             >  1:6326635/1‑128 (MQ=255)

                                                                                                                     agagTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTATATTTGTAGTTTTTATTTATATTATATATAGTTAATAATTTa            >  2:6435086/1‑128 (MQ=255)

                                                                                                                     agagTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTa            <  2:2327046/128‑1 (MQ=255)

                                                                                                                      gagTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATACATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAt         <  1:3143987/128‑1 (MQ=255)

                                                                                                                          tAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGAATAAAATTGTGAAATTTAGATATGATTTGGTATTAAATTTTTATTTTTTATTTATATTTTATAAAGTTAATAATTTATAttt       >  1:4128063/1‑128 (MQ=255)

                                                                                                                           agataattatatatatatatatatatatatatatatatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTa            <  1:81684/118‑1 (MQ=255)

                                                                                                                           aaT‑‑G‑‑‑‑ATATATATATATATATATATATATATAAGCAAGCGATCAGCATAAAATGGTGATATTTAGATCTGAGTTGGTCTTTATTTTGTTGTTTTTATTTTTAGTTTATATAGTTAATATTTTAGAtttt      >  2:2904135/1‑128 (MQ=255)

                                                                                                                             atagatatatatatatatatatatatatatatatatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGa          <  2:6581495/120‑1 (MQ=255)

                                                                                                                                tatttatatatatatatatatatatatatatatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAttt       <  1:6162070/123‑1 (MQ=255)

                                                                                                                                    tatatatctatatatatatatatatatatGCAAGCGATCAGCATAAAATGGGGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTaa   <  1:5925205/127‑1 (MQ=255)

                                                                                                                                     atatatatatatatatatatatatatatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAat  <  2:2536146/128‑1 (MQ=255)

GAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAAT  >  CP016816/437754‑438008

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.