New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 = 768912008 (0.780)388 (0.150) 122/252 16.7 15.8% intergenic (‑140/+45) JCVSYN2_00300/JCVSYN2_00305 UTP‑‑glucose‑1‑phosphate uridylyltransferase/hypothetical protein
?CP016816 76895 = 2135 (0.830)intergenic (‑144/+41) JCVSYN2_00300/JCVSYN2_00305 UTP‑‑glucose‑1‑phosphate uridylyltransferase/hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 2370 total aligned reads displayed.

AAAATTTATATATATTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAG‑AAAAATATT‑ACAAC‑‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATCAGTGATC  >  CP016816/76764‑77017
                                                                                                                                 |                                                                                                                                
aaaaTTTATATATATTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAG‑AAAAATATT‑ACaa                                                                                                                                  >  1:4190240/1‑128 (MQ=255)
 aaaTTTATATATATTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAG‑AAAAATATT‑ACAAc                                                                                                                                 >  1:3459253/1‑128 (MQ=255)
  atattttttatatTAGTGAACATAAGGATGTTTAAAAAAAATTTATAATAACTTTACAACCCAAATTCACCTTTAAATTCAAAAAACATTATATAAAGATAAAATTTTTAAAG‑AAAAATATT‑ACaaat                                                                                                                                <  2:3100441/120‑3 (MQ=255)
  aaTTTTTATATATTAGTTAAATTAAGGATTTAAAATACAAATTAATTATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAC‑AAAAATATT‑ACAAC‑‑t                                                                                                                              <  2:1440207/128‑1 (MQ=255)
   aTTTATATATATTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGAACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAG‑AAAAATATT‑ACAAC‑‑tt                                                                                                                             >  1:2055550/1‑128 (MQ=255)
    tttATATATATTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAG‑AAAAATATT‑ACAAC‑‑ttt                                                                                                                            >  1:4932670/1‑128 (MQ=255)
       atttatatTATTTTACTTAATGATTTATAATACAAATTAAAAATAACTGTAAAACCCAAATTACCCTTTAAATTAAAATTAAATTATATATATATTAATTTTTTAAAT‑AAAAATATT‑ACAAC‑‑tttttt                                                                                                                         <  2:4660918/125‑1 (MQ=255)
        tatatatTATTGAACTTAAGGATGTATAATAAAAATTAATAATAACTTTAAAACACAAATTCCCCTTTAAATTCAAATAACATTATATAAATATAAATTTTTTAAAT‑AAAAATATT‑AAAAC‑‑ttttttt                                                                                                                        <  2:3417993/128‑1 (MQ=255)
         atatatTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAG‑AAAAATATT‑ACAAC‑‑tttttttt                                                                                                                       <  2:885910/128‑1 (MQ=255)
           atatTAGTGAAATTAATGATTTATAAAAAAAAATAAAAAAAAATTTACAACCCAAAATCCCCTTTAAATTCAAATAACATTATATAAATATAAATTTTTTAAAC‑AAAAATATT‑ACAAC‑‑tttttttttt                                                                                                                     <  2:5125463/128‑1 (MQ=255)
               tAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAAATTTTTAAAG‑AAAAATATT‑ACAAC‑‑ttttatttttattt                                                                                                                 >  2:4302154/1‑128 (MQ=255)
                    aaCTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAG‑AAAAATATT‑ACAAC‑‑ttttttttttttttgaaaa                                                                                                            >  2:2864325/1‑123 (MQ=255)
                     aCTTAATTATGTATAAAAAAAATTAAAAATAACTGTAAAACCCAAATTACCCTTTAAATTAAAATAAAATTAAATAAATATAAATTTTTTAAAT‑AAAAATATT‑ACAAA‑‑TTTTTTTTTTTTTTTTGGaa                                                                                                           <  2:1243943/128‑1 (MQ=255)
                     aCTTAAGGATGTATAATACAAATTAATAATAACTGTACAAACCAAATTCCCCTTTAAATTAAAATAACATTATATAAAGATAAATTTTTTAAAG‑AAAAATATT‑ACAAC‑‑TTTTTTTTTTTTTTTTGGaa                                                                                                           <  1:1875694/128‑1 (MQ=255)
                      cTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAG‑AAAAATATT‑ACAAC‑‑tttttttttattttagtaaat                                                                                                          >  1:3671198/1‑121 (MQ=255)
                      attaagttagTAAAATATAAAATAATAATAACTTTAAAAACAAAATTAACCTTTAAATTAAAATAACATTATATTAATTTAAATTTTTTAAAT‑TAAAATTTT‑AAAAC‑‑‑TTTTTTTTTTTTTTTGGAACt                                                                                                         <  1:5452845/119‑1 (MQ=255)
                       ttAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAG‑AAAAATAAT‑ACAAC‑‑tattatttattttttttataaa                                                                                                         >  1:2530994/1‑122 (MQ=255)
                        tAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAG‑AAAAATATT‑ACAAC‑‑ttttttatttttatgtaaataac                                                                                                        >  1:2362241/1‑117 (MQ=255)
                          attaTGTTTTATACCAATTAAAAATAAATTTAATACCCAAATTTCCATTTAAATTAAAATAAAATTATATAAATATAAATTTTTTAAAT‑TAAAATTTT‑AAAAA‑‑TTTTTTTTTTTTTTTTGGAACTAAc                                                                                                      <  2:193504/125‑1 (MQ=255)
                           ggATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAT‑AAAAATATT‑ACAAC‑‑tttttttttttttttgtaacatacat                                                                                                     >  2:4893182/1‑117 (MQ=255)
                                tataATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAG‑AAAAATATT‑ACAAC‑‑TTTTTTTTTTTTTTTT‑TAACTAAAATATAAt                                                                                               >  1:854134/1‑128 (MQ=255)
                                 ataataCAAATTAATAATAAATGTAAAACCAAAATTCCCCTTTAAATTAAAATAAAATTATATAAATATAAATTTTTTAAAT‑AAAAATATT‑ACAAA‑‑TTTTTTTTTTTTTTTTGGAACTAACATATAAt                                                                                               <  2:616390/128‑1 (MQ=255)
                                  taataaAAATTAAAAATAATATTACAACCAAAATTCCCCATTAAATTAAAATAACATTATAAAAATATAAATTTTTTAAAT‑AAAAATATT‑ACAA‑‑‑ATTTTTTTTTTTTTTTGGAACTAACATATAAttt                                                                                             <  1:1624805/128‑1 (MQ=255)
                                  taataCAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAG‑AAAAATATT‑ACAAC‑‑‑‑TATTTTTTTTTTTTGAAACTAAAATATAAtttt                                                                                            >  2:2282908/1‑128 (MQ=255)
                                    ataCAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAG‑AAAAATATT‑ACAAC‑‑TTTTTTTTTTTTTTTTTAAAAAAAAAAATAAttta                                                                                            >  1:1003459/1‑127 (MQ=255)
                                     taCAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAG‑AAAAATATT‑ACAAC‑‑‑TTTTTTTTTTTTTTTGGAACTAAAATAAAATTTTAc                                                                                          >  1:702648/1‑128 (MQ=255)
                                      aCAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAG‑AAAAATATT‑ACAAC‑‑ATTTTTTTTTTTTTT‑‑AAACTAACATATAATATTAcaa                                                                                        >  2:2640085/1‑126 (MQ=255)
                                        aaaTTAATAAAAACTGTAAAAACCAATATCAACTTTAAAATAAAATAACATTATTATAATAAAAATTTTTTTAAT‑AAAAATATT‑AAAACT‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTAcc                                                                                         <  1:4560258/128‑1 (MQ=255)
                                          attattAATAAAATTACAAACAAAATTACAATTTTAATTCAAATAAAATTATATAAATATTAATTTTTTAAAT‑AAAAATTTT‑A‑AAA‑‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAatt                                                                                     <  2:333186/128‑1 (MQ=255)
                                          ataaaaaataaCTGTACAACCCAAATAACCCTTTAAATTCAAAAAACATTATATAAAGATAAATTTTTTAAAT‑AAAAATATT‑AAAAC‑‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAat                                                                                      <  1:1346486/122‑1 (MQ=255)
                                          aTTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAG‑AAAAATATT‑ACAAC‑‑TTTTTTTTTTTTTTTTTGAACTAAAATATAATTTTACCAat                                                                                      >  2:4727983/1‑128 (MQ=255)
                                          aTTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAG‑AAAAATATT‑ACAAC‑‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAat                                                                                      <  1:4294559/128‑1 (MQ=255)
                                             ataaataatTGAACAA‑CCAAATTTCCCTTTAAATTTAAATAACATTATATAAATTTAAATTTTTTAAAT‑AAAAATTTT‑A‑AAA‑‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAAttatta                                                                                 <  2:5502364/125‑1 (MQ=255)
                                             aaatataaCTTTAAAACCTAATTTCACTATTAAATTAAAAAAAAATTTATTAAATATAAATTTTTTAAAT‑AAAAAAATT‑ACAA‑‑‑‑ATTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAattatga                                                                                 <  1:5320777/124‑3 (MQ=255)
                                              ataataaCTTGAAAAACAAAATTACCATTTAAATACAAATAAAATTAAATAAATATAATATTTTAAAAC‑AAAAATATT‑ACAAC‑‑‑TTTTTTTTTTTTTTTGTAACTAACATATAATTTTACCAAttatta                                                                                 <  2:378244/128‑1 (MQ=255)
                                               taataaCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAG‑AAAAATATT‑ACAAC‑‑‑‑TTTTTTTTTTTTTTGGAAATAACATATAATTTAACAATttattaca                                                                               >  1:2438755/1‑126 (MQ=255)
                                               aaaaaaCAGTACAACCCAAATTCCACTTTAAAATAAAATAAAATTATATAAATAAAAATTTTTTAAAT‑AAAAATATT‑AAAAC‑‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAAttatta                                                                                 <  1:3057837/124‑1 (MQ=255)
                                                  taaCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAG‑AAAAATATT‑ACAAC‑‑TTTTTTTTTTTTTATT‑AAAAAAACATAAAATTTAAACAAATATAAAaat                                                                             >  2:3197488/1‑128 (MQ=255)
                                                    aCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAG‑AAAAATATT‑ACAACT‑TTTTTTTTTTTTTTTTGTAAATAAAATATAATTTTACAAATTTTTATaat                                                                             >  2:2044822/1‑128 (MQ=255)
                                                      tGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAG‑AAAAATATT‑ACAAC‑‑TTTTTTTTTTTTTTTT‑GCACTAACAAAAAATTTTACAAATTTTTAAaatttac                                                                         >  1:5242525/1‑126 (MQ=255)
                                                       ttACAAACAAAATTAACCTTTAAATTAAAATAACATTATTTAAAGATAAATTTTTTAAAT‑AAAAATATT‑AAAAC‑‑‑ATTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGaatttcaa                                                                        <  2:3561798/127‑1 (MQ=255)
                                                         aCAACCAAATTTACCTTTTAAATTAAAATAAAATTATATAATTAAAAATTTTTTAAAT‑AAAAATATT‑A‑AAA‑‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGaatttcaatt                                                                      <  1:392445/128‑1 (MQ=255)
                                                          cAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAG‑AAAAATATT‑ACAAC‑‑‑TTTTTTTTTTTTTTTGGAACTAAAATTAAATTTTACAAATTAATTTaatttaaattt                                                                     >  2:2726515/1‑128 (MQ=255)
                                                              caaaataacattttAAATTAAATTAATATT‑TATTAATATAAATTTTTTTAAT‑TAAAAAATT‑TAAA‑‑‑‑‑AATTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGAt                                                              <  1:4652675/117‑1 (MQ=255)
                                                                ctcttacgatctAAATTAAAATTACAATATATAATGATAAATTTTTTAAAT‑AAAAATATT‑AAAAC‑‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGa                                                               <  1:3565288/117‑1 (MQ=255)
                                                                aaattaaacTTTAAATTTAAATAAAATTTTTTAAATATTAATTTTTTAAAT‑AAAAA‑ATT‑TAAAA‑‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGa                                                               <  2:2163972/120‑1 (MQ=255)
                                                                  atacccaTTAAAATTAAATAAAAATTATA‑AAACATAAAATTTTTAAA‑‑AAAAAAATA‑ATAAA‑‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGa                                                            <  1:4751562/125‑1 (MQ=255)
                                                                  aTTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAG‑AAAAATATT‑ACAAC‑‑‑‑TTTTTTTTTTTTTTGGAACTAACATTTAATTTTACCAATTATTAGAATTTAAATTTCACagaaga                                                            >  1:1456639/1‑128 (MQ=255)
                                                                  aTTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAG‑AAAAATATT‑ACAAC‑‑‑‑TTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTATAATTTAAATTTCACATATGa                                                            >  1:798097/1‑128 (MQ=255)
                                                                     aaccTTTAAATTAAAATAAAATTATATAAATTTAAATTTTTTAAAT‑AAAAATATT‑AAAAC‑‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAAt                                                          <  1:1540317/126‑1 (MQ=255)
                                                                      cccTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAG‑AAAAATATT‑ACAAC‑‑‑TTTTTTTTTTTTTTTGGAAATAACATATAATTTTACAAATTATTATAATTTCAATATCAAAGATGAAtt                                                         >  1:181725/1‑128 (MQ=255)
                                                                        cTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAG‑AAAAATATT‑ACAAC‑‑‑‑TTTTTTTTTTTTTTGGAAATAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGAt                                                      >  1:5153456/1‑128 (MQ=255)
                                                                          ttaaattaaaATAAAATTATATTAAGATAAATTTTTTATAT‑AAAAATATT‑ACAA‑‑‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGAtt                                                     <  1:1191568/128‑1 (MQ=255)
                                                                           tAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAG‑AAAAATATT‑ACAACT‑TTTTTTTTTTTTTTTTTGAAATAACATATAAATTTACCAATTATTATATTTTAAATTTCCCATATGAATTTAt                                                      >  2:421291/1‑128 (MQ=255)
                                                                           tAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAG‑AAAAATATT‑ACAAC‑‑TTTTTTTTTTTTTTTTGGAAAAAAAATATAATTTTAACAATAATTATAATTAAAATTAAACAGATAAATTTAtt                                                     >  2:5012694/1‑128 (MQ=255)
                                                                           tAAATTCAAATAACATTATAAAAATATAAATTTTTTAAAT‑AAAAATATT‑ACAAC‑‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGAttt                                                    <  1:3282113/128‑1 (MQ=255)
                                                                           tAAATTAAAATAAAATTAAATAAATATAAATTTTTTAAAG‑AAAAATATT‑ACAAC‑‑‑‑TTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATttc                                                   <  1:1955527/128‑1 (MQ=255)
                                                                            aaaTTCAAATAACATTATATAAAGATAAATTTTTTAAAG‑AAAAATATT‑ACAACT‑TTTTTTTTTTTTTTTTGTAAATAACATATAATTTTACCAATAATTAAAATTTCAATTTAACATATTAATTGAtt                                                     >  2:390497/1‑128 (MQ=255)
                                                                            aaaTTCAAATAACATTATATAAAGATAAATTTTTTAAAG‑AAAAATATT‑ACAAC‑‑TTTTTTTTTTTTTTTTTGAAATAAAAAATAATTTTACCAATTATTATAATTTAAATTTAAAATATTAATTGAttt                                                    >  1:227268/1‑128 (MQ=255)
                                                                            aaaTTCAAATAACATTATATAAAGATAAATTTTTTAAAG‑AAAAATATT‑ACAAC‑‑TTTTTTTTTTTTTTTT‑GAAAAAAAATATATTTTAACAAAATATTAAAATTTAAATTTAAAAaattaattttttta                                                   >  2:403850/1‑122 (MQ=255)
                                                                            aaaTTCAAATAACATTATATAAAGATAAATTTTTTAAAG‑AAAAATATT‑ACAAC‑‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTAACAGATTAATTTAttaa                                                   >  2:155869/1‑126 (MQ=255)
                                                                            aaaTTCAAAATACAATATATTAATATAAATTTTTTAAAG‑AAAAATATT‑ACAA‑‑‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATttc                                                   <  2:2999506/128‑1 (MQ=255)
                                                                             aaTTCAAATAACATTATATAAAGATAAATTTTTTAAAG‑AAAAATATT‑ACAAC‑‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACAAATTATTAGAATTTAAATTTCAAAAATTAATTGATttct                                                  >  1:3345165/1‑128 (MQ=255)
                                                                             aaTTCAAATAACATTATATAAAGATAAATTTTTTAAAG‑AAAAATATT‑ACAAC‑‑‑TTTTTTTTTTTTTTTGGAAATAACATATATTTTTACCATTTATTTTAATTTCATTTTCACAGATGAATTGAtttat                                                  >  1:4376641/1‑126 (MQ=255)
                                                                             aaTTCAAATAACATTATATAAAGATAAATTTTTTAAAG‑AAAAATATT‑ACAAC‑‑‑‑TTTTGTTTTTTTTTGGCACTAAATTATAATTTTCCAAATTATTAGATTTGAAATTTCCAATTTGAATTGATttatt                                                 >  2:4811860/1‑128 (MQ=255)
                                                                              aTTAAAATAACAATATATAAATATAAATTTTTTAAAT‑AAAAATATT‑ACAAC‑‑‑‑TTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATttcttc                                                <  2:4129609/128‑1 (MQ=255)
                                                                               ttaaaaTAAAATTATATAAATATAAATTTTTTAAAT‑AAAAATATT‑AAAAA‑‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATttctt                                                 <  1:5538028/125‑1 (MQ=255)
                                                                               ttCAAAAAAAAATATATAAATTTAAATTTTTTATAGAAAAAAAATA‑AAAAT‑‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATttct                                                  <  2:5322090/128‑1 (MQ=255)
                                                                                aataaaaaCAATATATAAATTTAAAATTTTTTAAT‑TAAAATATT‑TAAAA‑‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATttcttc                                                <  1:2835559/122‑1 (MQ=255)
                                                                                 aaaaTTACATTAATTAAAGATAAATTTTTTTAAG‑AAAAAAATT‑AAAAC‑‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCta                                              <  2:690156/127‑1 (MQ=255)
                                                                                    aaaaaattattTAAATTTAAATTTTTTAAAT‑AAAAATATT‑A‑AAA‑‑ATTTTTTTTTTTTTTTGGAACTAAAATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCtaata                                           <  2:2412855/123‑1 (MQ=255)
                                                                                    aTAACATTATATAAAGATAAATTTTTTAAAG‑AAAAATATT‑ACAAC‑‑‑‑TTTTTTTTTTTTTTGGAACTAAAATATAATTTTACCAATTATTAGAATTTCAATTTAACAGATTAATTGAttatatcgtaata                                          >  1:632869/1‑117 (MQ=255)
                                                                                     aaaaaTTATATAATTTAAAATTTTTAAAAA‑AAAAATTTTAAAAAT‑‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCtaat                                            <  1:1111477/124‑1 (MQ=255)
                                                                                      aaCATTATATAAAGATAAATTTTTTAAAG‑AAAAATATT‑ACAAC‑‑‑‑TTTTTTTTTTTTTTGGAAATAACATATAATTTTACAAATTATTAAAATTTCAATTTAACAGATGAATTGATTAATTATAATAAtt                                        >  2:106910/1‑128 (MQ=255)
                                                                                       aCATTATATAAAGATAAATTTTTTAAAG‑AAAAATATT‑ACAAC‑‑‑TTTTTTTTTTTTTTTGGAACTAAAAAATAATTTTACAAATTATTATAATTAAAATTTAAAATATTAATTTATTTCTAATAATAAtt                                        >  1:127413/1‑128 (MQ=255)
                                                                                       aCATTATATAAAGATAAATTTTTTAAAG‑AAAAATATT‑ACAAC‑‑‑‑TTTTTTTTTTTTTTGGAAATAAAATATAATTTTACCAATTATTATAATTTCAATTTCACATATGAATTTATTTATTCTAATAAttt                                       >  2:5226011/1‑128 (MQ=255)
                                                                                         aTTATATAAAGTTTAATTTTTTAAAG‑TAAAATATT‑AAAAC‑‑‑‑TTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGt                                     <  2:4407367/128‑1 (MQ=255)
                                                                                          ttATATAAATATAAATTTTTTAAAG‑AAAAATATT‑AAAAC‑‑‑‑TTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTc                                    <  1:2613960/128‑1 (MQ=255)
                                                                                          ttATATAAAGATAAATTTTTTAAAG‑AAAAATATT‑ACAAC‑‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTAACATATTAATTTATTTATTATAATAATTTGt                                     >  2:1332942/1‑128 (MQ=255)
                                                                                          ttATATAAAGATAAATTTTTTAAAG‑AAAAATATT‑ACAAC‑‑‑‑‑TTTTTTTTTTTTTGGAAATAAAATATAATTTTACAATTTTTTAAAATTAAAATTAACAATATGAATTTATTAATTATAATAAtttttgt                                   >  2:4565822/1‑124 (MQ=255)
                                                                                           tatttaAATATAAATTTTTTAAAG‑AAAAATATT‑ACAA‑‑‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTc                                    <  1:4044660/128‑1 (MQ=255)
                                                                                            atataAAGATAAATTTTTTAAAG‑AAAAATATT‑ACAAC‑‑‑TTTTTTTTTTTTTTTGTAACTAACATAAAATTTTACCAATTATTAGAATTTCAATTTCCAAGATGAATTGATTTCTTCAAATAATTTGACt                                   >  1:986618/1‑128 (MQ=255)
                                                                                            atataAAGATAAATTTTTTAAAG‑AAAAATATT‑ACAAC‑‑‑‑TTTTTTTTTTTTTTGTAAATAAAATAAATTTTTACCAATTATTAGAATTTCAATTTCACAAATAAATTGAATTATTATTATAAtttttatt                                  >  2:1736459/1‑123 (MQ=255)
                                                                                             tataaatataaaTTTTTTAAAT‑AAAAATATT‑A‑AAA‑‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCta                                  <  1:3188159/128‑1 (MQ=255)
                                                                                              ataAATTTAAATTTTTTTAAA‑TAAAATATTAAAAAT‑‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCt                                   <  2:1843241/128‑1 (MQ=255)
                                                                                                 aatattaaTTTTTTAAAT‑AAAAATATT‑AAAACTTTTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCtat                                 <  1:4837946/122‑1 (MQ=255)
                                                                                                   gATAAATTTTTTAAAG‑AAAAATATT‑ACAAC‑‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGa                            <  2:4471592/128‑1 (MQ=255)
                                                                                                    aTAAATTTTTTAAAG‑AAAAATATT‑ACAAC‑‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATTATTTGATTTATTCTAATAATTTGTCTATATAGAt                           >  1:5047946/1‑128 (MQ=255)
                                                                                                     tAAATTTTTTAAAT‑AAAAATATT‑AAAAC‑‑‑TTTTTTTTTTTTTTTGGAAATAACATATTATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATg                          <  1:3795041/128‑1 (MQ=255)
                                                                                                           ttttAAAT‑AATAATATT‑ATAAC‑‑‑TTTTTTTTTTTTTTTGTAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGtttttt                    <  1:4469340/128‑1 (MQ=255)
                                                                                                                  g‑AAAAATATT‑ACAAC‑‑‑‑TTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAAATATTAGAATTTCAATTTCACATATGAATTTATTTCTTATAATAATTTTTCTATATAGATTTTTTTTATATCTaa            >  2:2536377/1‑128 (MQ=255)
                                                                                                                  ataaaaaaATT‑A‑AAA‑‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCt              <  1:2953643/126‑1 (MQ=255)
                                                                                                                    aaaaaTATT‑AATAC‑‑‑‑TTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTaaa           <  1:2177062/128‑1 (MQ=255)
                                                                                                                     aaaaTATT‑ACAAC‑‑‑TTTTTTTTTTTTTTTGGAAATAAAATATAATTTTACCAATTATTAAAATTTAAATTTAAAAGATAAATTTATTTATTATAATAATTTGTATATTTATATGTTTTTTATATCaaaa           >  2:1637232/1‑128 (MQ=255)
                                                                                                                     aaaaTATT‑AAAAA‑‑TTTTTTTTTTTTTTTTGTAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTaa            <  2:3664917/128‑1 (MQ=255)
                                                                                                                      aaaTATT‑ATAAC‑‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTaaa           <  2:1136785/128‑1 (MQ=255)
                                                                                                                        atatT‑TCATC‑‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATc         <  2:5388382/128‑1 (MQ=255)
                                                                                                                        atatT‑ACAAC‑‑TTTTTTTTTTTTTTTTGGAAATAAAATTTAATTTTACAAATTATTAGAATTTAAATTTAAAATATTAATTTATTTATTATAATAATTTTTATATTTATATGTTTTTTTTATATAAAta         >  1:2725809/1‑127 (MQ=255)
                                                                                                                        atatT‑ACAAC‑‑‑‑TTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATTAATTGATTTATTCTAATAATTTGTCAATATATATGTTTTTTATATATaataaat       >  2:802907/1‑123 (MQ=255)
                                                                                                                        atatT‑A‑AAA‑‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATCa        <  1:1726079/128‑1 (MQ=255)
                                                                                                                                 |                                                                                                                                
AAAATTTATATATATTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAG‑AAAAATATT‑ACAAC‑‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATCAGTGATC  >  CP016816/76764‑77017

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.