New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 = 768912008 (0.780)388 (0.150) 122/252 16.7 15.8% intergenic (‑140/+45) JCVSYN2_00300/JCVSYN2_00305 UTP‑‑glucose‑1‑phosphate uridylyltransferase/hypothetical protein
?CP016816 76895 = 2135 (0.830)intergenic (‑144/+41) JCVSYN2_00300/JCVSYN2_00305 UTP‑‑glucose‑1‑phosphate uridylyltransferase/hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 2518 total aligned reads displayed.

TTTATATATATTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAA‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑TTTT‑TTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATCAGTGATCTTTAC  >  CP016816/76768‑77022
                                                                                                                                    |                                                                                                                                
    tatatatTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAA‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑tttt‑ttt                                                                                                                             >  2:4424282/1‑128 (MQ=255)
      ttaatTAGTGAACATAATGAAGTATAATTCAAATTAATAATTACTGTAAAACCAAAATTCCCCTTTAAATTAAAATAAAATTATATAAA‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑tttt‑ttttt                                                                                                                           <  1:688689/125‑1 (MQ=255)
       atatTAGTGAAATTAATGATTTATAAAAAAAAATAAAAAAAAATTTACAACCCAAAATCCCCTTTAAATTCAAATAACATTATATAAA‑TATAAATTTTTTAAACAAAAATATT‑ACAA‑‑C‑tttt‑tttttt                                                                                                                          <  2:5125463/128‑1 (MQ=255)
        tatTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAA‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑tttt‑ttttttt                                                                                                                         >  1:2778598/1‑128 (MQ=255)
         atTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAA‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑tttt‑tttttttt                                                                                                                        >  1:1904297/1‑128 (MQ=255)
             gTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAA‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑tttt‑tttttttttttt                                                                                                                    >  1:3414307/1‑128 (MQ=255)
                   tttattaTGTATAATAAAAAATAATAATAACTGTACAACACAAATTACCCATTAAATTTAAATAAAATTATATAAA‑TATAAATTTTTTAAATTAAAATATT‑ACAA‑‑‑‑‑ATT‑TTTTTTTTTTTTGGAACTaa                                                                                                            <  2:3685967/122‑1 (MQ=255)
                     aaGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAA‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑tttt‑ttttttttttgtaactaaaa                                                                                                            >  1:4777588/1‑118 (MQ=255)
                     aaGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAA‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑‑TTT‑TTTTTTTTTTTTGCAACTAAc                                                                                                           >  1:1997392/1‑128 (MQ=255)
                      aGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAA‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑tttt‑tttttttttttgtaaataaaa                                                                                                           >  1:1655733/1‑118 (MQ=255)
                      aGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAA‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑ttta‑ttttttttttttaaaataaaa                                                                                                           >  1:2224504/1‑119 (MQ=255)
                       ttaTGTAAAATAAAAAATAATAATAAATGTAAAAACCAAATTCCCCTTTTAATTTAAAATAAATTAAATAAA‑TATAAATTTTTTAAATTAAAATATT‑ACAA‑‑‑‑ATTT‑TTTTTTTTTTTTGGAACTAACat                                                                                                         <  1:316478/126‑1 (MQ=255)
                       ggATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAA‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑TTTT‑TTTTTTTTTTTTTGAAATAACa                                                                                                          >  1:3021281/1‑128 (MQ=255)
                       agATGTATATAAGAAAATAATAAAAAAATTAAAACACAAATTACACTTTAAATTAAAAAAAAATAAAATAAT‑TATAAATTTTTTAATTAAAAAAATA‑TAAA‑‑C‑tttt‑tttttttttttttttggaacta                                                                                                          <  2:4669623/127‑11 (MQ=255)
                        gATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAA‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑TTTT‑TTTTTTTTTTTTTTAACTAAAat                                                                                                         >  1:829648/1‑128 (MQ=255)
                         aTGTAAAATAAAAATTAAAAAAAACTGAACAACCCAAAATCCCCTTTAAAATAAAATAAAATTATATAAA‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑‑‑TT‑TTTTTTTTTTTTGGAACTAACAtata                                                                                                      <  1:4427248/128‑1 (MQ=255)
                          tttataAAACAAAATAATAATAACTGTAAAACCCAAATTACCATTTAAATTAAAATAAAATTTTTTAAA‑GATAAATTTTTTAAATAAAAATATT‑AAAA‑‑‑‑‑ATT‑TTTTTTTTTTTTGGAACTAACATATaa                                                                                                     <  2:1717152/126‑1 (MQ=255)
                             ataataCAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAA‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑TTTT‑TTTTTTTTTTTTGTAAATAAAAaataat                                                                                                    >  1:1827109/1‑128 (MQ=255)
                              ttataAAAATTAATAATAACTGTAAAAACCAAATTACCCTTTAAATTTAAATAAAATTATATAAA‑TATAAATTTTTTAAATAAAAATATTAAAAA‑‑T‑TTTT‑TTTTTTTTTTTTGGAACTAACATATAAt                                                                                                    <  2:1189445/126‑1 (MQ=255)
                              taataCAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAA‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑TTTA‑TTTTTTTTTTTTGAAAATATCATATAAtt                                                                                                   >  2:2141303/1‑128 (MQ=255)
                                ataCAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAA‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑TTTT‑TTTTTTTTTTTTTAAAAAAAAAAATAAttta                                                                                                 >  1:1003459/1‑127 (MQ=255)
                                ataCAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAA‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑TTTT‑TTTTTTTTTTTTGGAACTAACATATAAtttt                                                                                                 >  1:5096501/1‑128 (MQ=255)
                                  aaaaaTTTATTATAAATTTAAAAACAAAATTACCCTTTAAAATAAAATAAAATTTTATAAA‑TTTTAATTTTTTTAATTAAAATTTT‑A‑AA‑‑A‑ATTT‑TTTTTTTTTTTTGGAACTAACATATAATTTTAcc                                                                                              <  2:3261460/126‑1 (MQ=255)
                                  aCAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAA‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑TTTT‑TTTTTTTTTTTT‑GAAATAAAATATAATTTTaac                                                                                              >  1:4231947/1‑126 (MQ=255)
                                  aCAAATAAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATAAAAA‑TATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑‑TTT‑TTTTTTTTTTTTGGAACTAACATATAATTTTAcc                                                                                              <  1:2408908/128‑1 (MQ=255)
                                   cAAATTAATTATAACTTTACATATCATATTCCCCTTTATATTCAAATAACATTATATAAA‑TATAATTTTTTTAAAGATAAATTTT‑AAAA‑‑C‑‑‑‑‑‑TTTTTTTTTTTTGGATCTAACATATAATTTTACCAatt                                                                                          <  1:1364294/128‑1 (MQ=255)
                                   cAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAA‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑‑TTT‑TTTTTTTTTTTTGGAACTAAAATATAATTTTAcaa                                                                                             >  1:3728167/1‑126 (MQ=255)
                                    aaaTTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAA‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑‑‑TT‑TTTTTTTTTTTTGGAACTAACATATAATTTTACCAat                                                                                           <  1:594895/128‑1 (MQ=255)
                                      aataataataaCTGTACAACCCAAATTCCCATTTAAATTCAAATAAAATTAAATAAA‑GATAAATTTTTTAAAGAAAAATATT‑AAAA‑‑C‑TTTTATTTTTTTTTATTTGAAAAAAAATATAATTTAACaaa                                                                                            >  2:5016370/3‑128 (MQ=255)
                                        taataaaaaCTGTACAAACCAAATTCCCCTTTAAATTCAAATAACATTATATAAA‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑‑‑‑T‑TTTTTTTTTTTTGGAACTAACATATAATTTTACCAAttatta                                                                                      <  1:4107164/128‑1 (MQ=255)
                                         ataaataatTGAACAA‑CCAAATTTCCCTTTAAATTTAAATAACATTATATAAA‑TTTAAATTTTTTAAATAAAAATTTT‑A‑AA‑‑A‑ATTT‑TTTTTTTTTTTTGGAACTAACATATAATTTTACCAAttatta                                                                                      <  2:5502364/125‑1 (MQ=255)
                                         aataataaCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAA‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑TTTT‑TTTTTTTTTTTTTTAACTAAAATATAATTTTACCAattat                                                                                        >  2:3002037/1‑128 (MQ=255)
                                          ataattaATGTAAATCCCAAATTATCATTTAAATTTAAATAATATTTTATTAA‑TAAATATTTTTTAAATAAAAATATT‑TAAA‑‑C‑‑TTT‑TTTTTTTTTTTTGGAACTAACATATAATTTTACCAAttatta                                                                                      <  2:345162/128‑1 (MQ=255)
                                           taataaCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAA‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑TTTT‑TTTTTTTTTTTTGGAACTAACAAATAATTTTAACAAttatta                                                                                      >  1:350391/1‑128 (MQ=255)
                                            aataaCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAA‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑‑TTT‑TTTTTTTTTTTTGGAAGTAAAATATAATTTTACCAAtttttata                                                                                    >  2:1303128/1‑126 (MQ=255)
                                            aataaCTGTACAACACAAATTCCCCTTTAAATTGAAATAAAATTATATTAA‑TATAAATATTTTAAAGAAAAATATT‑A‑AA‑‑A‑AATT‑TTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGa                                                                                    <  1:2321719/128‑1 (MQ=255)
                                              taaCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAA‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑‑TTT‑TTTTTTATTTTTGGAAATAACATTTATTTTTAAAATTTATTACaat                                                                                  >  1:548842/1‑128 (MQ=255)
                                                atgtaaaaaCCAAAATTCCCTTTTAAATT‑AAATAAAAATATTTTAA‑TAAAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑‑‑‑T‑TTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGaatttcaa                                                                             <  2:4579241/121‑1 (MQ=255)
                                                aCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAA‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑‑TTT‑TTTTTTTTTTTTGGAACTAACATAAAATTTTAACAATTATTTTaattt                                                                                >  2:697959/1‑128 (MQ=255)
                                                  tGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAA‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑TTTT‑TTTTTTTTTTT‑‑GAAATAATAAAAAATTTTCACAATTATTAGaatttaaa                                                                             >  2:1619809/1‑128 (MQ=255)
                                                  tGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAA‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑‑TTT‑TTTATTTTTTTTGTAAATAACATATAATTTTACAAATAATTATaatttaa                                                                              >  1:1285526/1‑126 (MQ=255)
                                                  tGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAA‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑‑‑TT‑TTTTTTTTTTTTGTAAATAAAATATAATTTTAAAAATAATTAGaatttaaa                                                                             >  1:2096282/1‑128 (MQ=255)
                                                  tGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAA‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑‑‑TT‑TTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGaatttaaa                                                                             >  1:4684971/1‑128 (MQ=255)
                                                   ttaaaaCACAAATTACACTTTAAATTAAAATAAAATTATATAAA‑TATAAATTTTTTAAATAAAAATATT‑A‑AA‑‑A‑ATTT‑TTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGaatttcaa                                                                             <  2:2611085/124‑1 (MQ=255)
                                                      aaaacaaaaaTCCCATTTAAATTAAAATAAAATTATATAAA‑TAAAAATTTTTTAAATAAAAAAATT‑AAAA‑‑CTTTTT‑TTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGaatttcaat                                                                            <  2:4227443/122‑1 (MQ=255)
                                                       aaaccaaaataaccTTTAAATTAAAATTAAATTATATAAA‑TTTAAATTTTTTAAATTAAAATATT‑A‑AA‑‑A‑ATTT‑TTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGaatttcaatttc                                                                         <  2:4744206/116‑1 (MQ=255)
                                                           cAAATTCCCCTTTAAATTCAAATAACATTATATAAA‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑‑TTT‑TTTTTTTTTTTTGTAAATAACATATAATTTTACCAATTATTAAAatttaaatttcaaat                                                                     >  2:1103516/1‑125 (MQ=255)
                                                            aaatttaaatttaaatttaaaTAAAATTTTATTAA‑TTTAAATTTTTTAAATAAAAATATT‑A‑AA‑‑A‑ATTT‑TTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGa                                                                    <  2:813578/119‑1 (MQ=255)
                                                            aaaTTCCCCTTTAAATTCAAATAACATTATATAAA‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑‑TTT‑TTTTTTTTTTTTGTAACTAAAATAAAATTTTACCAATTATTATCATTTCAATTTAACAGa                                                                    >  1:325780/1‑128 (MQ=255)
                                                            aaaTTCCCCTTTAAATTCAAATAACATTATATAAA‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑‑TTT‑TTTTTTTTTTTTGGAAATAACATAAAATTTTACCAATAAATATAATTAAAATTTcacata                                                                    >  1:119489/1‑126 (MQ=255)
                                                             aaTTCCCCTTTAAATTCAAATAACATTATATAAA‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑TTTT‑TTTTTTTTTTTTGTAACAAAAATTTAATTTTACCAAATTATAGATTTTCAATTTACCAGa                                                                    >  2:4143753/1‑128 (MQ=255)
                                                             aaTTCCCCTTTAAATTCAAATAACATTATATAAA‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑TTTT‑TTTTTTTTTTTT‑‑AAATAAAATAAAATTTTACAAATTATTATAATTTAAATTAAACAAATg                                                                  >  1:754611/1‑128 (MQ=255)
                                                             aaTTCCCCTTTAAATTCAAATAACATTATATAAA‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑TTTT‑TTTTTTTTTTT‑‑GAACTAACATATAATTTTACCAATTTTTATAATTTCAATTTCACAGagg                                                                  >  2:4053437/1‑126 (MQ=255)
                                                               ttaaccTTTATATTAAAATAAAATTATATAAA‑TATAAATTTTTTAAAGAAAAATATT‑AAAA‑‑C‑TTTT‑TTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATg                                                                  <  1:2479334/124‑1 (MQ=255)
                                                               ttaaacTTTATATTAATATAAAATTTTATAAATTATAAA‑TTTTTAAATAAAAATAAT‑AAAAATT‑TTTT‑TTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGa                                                                    <  2:3118743/123‑1 (MQ=255)
                                                                  cccTTTAAATTCAAATAACATTATATAAA‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑TTTT‑TTTTTTTTTTTTTGAAATAACATATAATTTTACAAATTATTAGAATTTCAATTTAAAAAATGatt                                                               >  1:2592557/1‑126 (MQ=255)
                                                                    cTTTAAATTAAAATAACATTATATAAA‑GATAAATTTTTTAAATAAAAATATT‑ACAA‑‑C‑‑TTT‑TTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGa                                                            <  1:1474531/128‑1 (MQ=255)
                                                                    atttAAATTAAAATAAAATTATATAAA‑TATAAATTTTTTAAATAAAAATATT‑A‑AA‑‑A‑ATTT‑TTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGa                                                            <  1:3317879/127‑1 (MQ=255)
                                                                     tttAAATTCAAATAACATTATATAAA‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑‑TTT‑TTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTATAATTTAAATTTCACATATGAATTTAt                                                           >  2:3349452/1‑128 (MQ=255)
                                                                       taaatttaaattATATTATATAAA‑TATTAATTTTTTAAATAAAAATTTT‑TAAA‑‑A‑TTTT‑TTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGAtt                                                          <  2:237678/128‑1 (MQ=255)
                                                                        aaaTTCAAATAACATTATATAAA‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑TTTT‑TTTTTTTTTTTTGGAAATAACATATAATTTTACCAATTATTATAATTTAAATTTCACAAATGAATTGAttt                                                         >  1:4334342/1‑128 (MQ=255)
                                                                          ataaaaaTAACATTATATAAA‑CAAAAATTTTATAAATAAAAATATT‑ACAA‑‑‑‑AATT‑TTTTTTTTTTTTGGAAATTACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATttctt                                                      <  2:3595775/124‑1 (MQ=255)
                                                                          aataaaaTAAAATTATATAAA‑TATAAATTTTTTAAAGAAAAATATT‑AAAA‑‑‑‑‑ATT‑TTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATttcttc                                                     <  2:1912393/124‑1 (MQ=255)
                                                                           ttaaataaaaattattTAAT‑TATAAA‑TTTTTAAATTAAAAAAAT‑AAAA‑‑A‑ATTT‑TTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATttcttc                                                     <  1:2894963/118‑1 (MQ=255)
                                                                              aaaTAATATTATTTAAA‑TATAAATTTTTTAAATAAAAATATT‑ATAA‑‑CTTTTT‑TTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTtcttct                                                    <  2:1832722/128‑1 (MQ=255)
                                                                               aaTAACATTATATAAA‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑TTTT‑TTTTTTTTTTTTTAAACAAAAAAAAAATTTTACAAAAAATTAAAATTTAAATTTAAAAaattaattaattaattataa                                                  >  2:2035446/1‑120 (MQ=255)
                                                                                   aCATTATATAAA‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑‑‑TT‑TTTTTTTTTTTTGGAAATAAAATATAATTTTACCAATTATTATAATTTCAATTTCACATATGAATTTATTTATTCTAATAAttt                                            >  2:5226011/1‑128 (MQ=255)
                                                                                    cATTATATAAA‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑‑TTT‑TTTTTTTTTTTTGTAACTAAAATATAATTTTAACAATTATTAGAATTTCAATTTAACATATTAATTAATTTATTATAATAAttt                                            >  1:5380203/1‑128 (MQ=255)
                                                                                    cATTATATAAA‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑‑TTT‑TTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTAAATTTCACAGATTAATTGATTTCTTATAATAAttt                                            >  1:5195614/1‑128 (MQ=255)
                                                                                      ttATATAAA‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑TTTT‑TTTTTTTTTTTTGGAACTAAAATATAATTTTACCAATTATTATAATTTAAATTTCACAGATGAATTTATTTATTCTAATAATTTg                                           >  2:622913/1‑128 (MQ=255)
                                                                                        atataAA‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑‑TTT‑TTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTATAATTTAAATTTCACATATTAATTTATTTCTTATAATAATTTGtat                                        >  2:2494160/1‑126 (MQ=255)
                                                                                         tataAA‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑‑‑TT‑TTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCtat                                      >  2:1014109/1‑128 (MQ=255)
                                                                                         attttaatattaaTTTTTTAAATAAAAATATT‑A‑AA‑‑A‑ATTT‑TTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCt                                        <  2:2260676/117‑1 (MQ=255)
                                                                                          tttaatttttaaTTTTTTAAATAAAAATTTT‑TAAA‑‑A‑‑‑‑T‑TTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCtata                                     <  2:3924975/118‑1 (MQ=255)
                                                                                          taatattattatttttttAAAGATAAATATT‑TTAA‑‑‑‑ATTT‑TTTTTTTTTTTTGTAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACATATGAATTGATTTCTTCTAATAATTTGTCta                                       <  2:1510861/116‑1 (MQ=255)
                                                                                          ataAA‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑‑TTT‑TTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTATAATTTCAATTTCACATATGAATTTATTTCTTCTAATAATTTGTCtat                                      >  2:1393262/1‑128 (MQ=255)
                                                                                             aa‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑CTTTTT‑TTTTTTTTTTTTGGAAATAAAATATAATTTTACAAATTTTTAAAATTTAAATTTAAAATATGAATTTATTTATTATAATAATTTTtatata                                     >  1:4500510/1‑128 (MQ=255)
                                                                                             aa‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑TTTT‑TTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTTTCaatat                                    >  2:4823064/1‑128 (MQ=255)
                                                                                                gATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑‑‑TT‑TTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTTATTTCTTCTAATAATTTTTCTatatatat                                >  1:526325/1‑128 (MQ=255)
                                                                                                 taataTTTTTTTAATAATATTTTT‑AAAA‑‑T‑TTTT‑TTTTTTTTTTTTTGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGa                                 <  2:2684603/124‑1 (MQ=255)
                                                                                                 aTAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑‑TTT‑TTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTATAATTTCAATTTCACAGATGAATTGATTTCTTCTAATTATTTGTCTATATAGaa                                >  2:5313355/1‑127 (MQ=255)
                                                                                                  tAAAATTTTTAAACTAAAATATT‑AAAA‑‑C‑‑TTT‑TTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATg                               <  2:4313946/128‑1 (MQ=255)
                                                                                                   aaaTTTTTTAAATAAAAATATT‑ACAA‑‑A‑ATTT‑TTTTTTTTTTT‑‑GAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGtt                             <  1:4979340/128‑1 (MQ=255)
                                                                                                    aaTTTTTTAAAGAAAAATATT‑ACAA‑‑C‑TTTT‑TTTTTTTTTTTTGGAAATAAAATATAATTTTACCAATTATTATAATTTAAATTTCAAAAATTAATTTATTAATTCTAATAAATTTTATatatatattt                              >  2:3806031/1‑126 (MQ=255)
                                                                                                             aataaaaaTATT‑AAAA‑‑A‑TTTT‑TTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTatat                     <  1:2684935/125‑1 (MQ=255)
                                                                                                             aaGAAAAATATT‑ACAA‑‑C‑‑TTT‑TTTTTTTTTTTTGGAACTAAAATTTATTTTTACCAATTATTAAAATTTCATTTTAAAATATTAATTTATTTATTCTAATAATTTTTATATATAGATGTTTTTtattta                    >  1:4862033/1‑125 (MQ=255)
                                                                                                                aaaaaTATT‑ACAA‑‑C‑‑ATT‑TTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTaa                 <  1:4596817/128‑1 (MQ=255)
                                                                                                                 aaaaTATT‑A‑AA‑‑A‑ATTT‑TTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTaaa                <  1:3961296/128‑1 (MQ=255)
                                                                                                                   aaTATT‑ACAA‑‑CTTTTT‑TTTTTTTTTTTTGGAACTAAAATATATTTTTACCAATTATTAGAATTTAAATTTAAAAGATTAATTTATTTGTTATAATATTTTTTATATATAGATTTTTTTTTTATCTaaa                >  2:4490633/1‑128 (MQ=255)
                                                                                                                    atatT‑TCAT‑‑C‑TTTT‑TTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATc              <  2:5388382/128‑1 (MQ=255)
                                                                                                                    atatT‑ACAA‑‑C‑‑TTT‑TTTTTTTTTTTTGGAACTAACATTTAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTAAAAAGATGTTTTTTATATCTAAATCa             >  2:4899406/1‑128 (MQ=255)
                                                                                                                      atT‑TCAA‑‑A‑TTTT‑TTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATCAg            <  1:1547101/128‑1 (MQ=255)
                                                                                                                        taatttaaaaattt‑ttttttttttttGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATc              <  1:3626604/117‑1 (MQ=255)
                                                                                                                        aatttttaaaattt‑ttttttttttttGGAACTAACATATAATTTTAACAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATc              <  2:891671/117‑1 (MQ=255)
                                                                                                                           attaatatttt‑ttttttttttttGTAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATCAGt           <  1:1106300/121‑1 (MQ=255)
                                                                                                                           attaaaaattt‑ttttttttttttGTAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATCAGt           <  1:3825719/120‑1 (MQ=255)
                                                                                                                            ttaagacttt‑ttttttttttttGGAACTAACATATAATTTTACAAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATCAGTg          <  1:1751807/121‑1 (MQ=255)
                                                                                                                            aa‑‑C‑TTTT‑TTTTTTTTTTTTGGAACTAACATAAAATTTTACCAATTATTAGAATTTCAATTTCACATATGAATTGATTTCTGCTAATAATTTGTATTTATTGATGTTTTTTATATCTAAATCAGTGTTc       >  1:910988/1‑128 (MQ=255)
                                                                                                                                 atttt‑ttttttttttttGGAACTAACATATAATTTTACCTATTATTAGAATTTCAAATTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATCAGTGATctt     <  2:2908723/127‑1 (MQ=255)
                                                                                                                                  actt‑ttttttttttttGGAACTAAAAAATAATTTTACCAATTATAAAAATTAAAATTAAACAGATCAATTGATTTGTGATAAAAATTTTTATATATATTTGTTTTTTATATATAAATCTGTGATcttt    >  2:2782243/3‑128 (MQ=255)
                                                                                                                                    |                                                                                                                                
TTTATATATATTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAA‑GATAAATTTTTTAAAGAAAAATATT‑ACAA‑‑C‑TTTT‑TTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATCAGTGATCTTTAC  >  CP016816/76768‑77022

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.