New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 = 202486107 (0.060)248 (0.130) 73/250 29.6 68.2% intergenic (+264/‑411) JCVSYN2_00840/JCVSYN2_00845 hypothetical protein/lipoprotein
?CP016816 202490 = 124 (0.070)intergenic (+268/‑407) JCVSYN2_00840/JCVSYN2_00845 hypothetical protein/lipoprotein
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 248 total aligned reads displayed.

GTTAGTGTAAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP016816/202360‑202486
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAAAAT‑‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATATAATAC  >  CP016816/202490‑202612
                                                                                                                                                                                                                                                                   
GTTAGTGTAAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCACCTTA                                                                                                                                 >  2:3031355/1‑128
 TTAGTGTAAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTATATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCCTTAA                                                                                                                                >  2:3307103/1‑128
 TTAGTGTAAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATATGTTTATCTTCACAAATAAAAAAAAAACAATCCACTTAA                                                                                                                                >  2:3471055/1‑128
  TAGTGTAAATAATAGAGTTAAGCTTAATTAAAATACCATAAACTTAATAATTCTTATAAAGTATAACCTCGTGATCTATTTTTTTATTTTTTTATCTTCACAAATAAAAAAAAAAAAATCCACTAAAA                                                                                                                               >  2:1431182/1‑128
      GTAAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTTTTTATATTCACAAATAAAAAGAAAACAATACACTTAAAAATt                                                                                                                          >  1:937581/1‑127
      GTAAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTAAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTATTATTTTTTAATCATCACAAATAAAAAAAAAAAAATCACAATAAAAAT‑‑‑A                                                                                                                       >  2:933589/1‑128
         AATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCCTTAAAAAT‑‑‑TAAA                                                                                                                   >  2:3283262/1‑128
          ATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAAAAATCCCCATAAAAAT‑‑‑AAAAA                                                                                                                  >  2:2636064/1‑128
          ATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCATCGTGATCTATTTTTTTATTTGTTTATCTTAACAAATAAAAAAAAAAAAATACCAATAAAAAA‑‑‑TAAAA                                                                                                                  >  1:3163539/1‑128
           TAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTATTTATTTGTTTATCTACACAAATAAAAAAAAAACAAAACACTTAAAAAT‑‑‑AAAAAA                                                                                                                 >  1:3020097/1‑128
            AATAGAGTTAAGGTTAATTAAAATACCATAAACTAAATAATTCATATAATTTAGATCCTCTTGATCTATTTTTTTATTTTTTTATCTTCACAAATAAAAAAAAAACAATCCACTAAAAAAT‑‑‑TAAAAAA                                                                                                                >  2:1227820/1‑128
             ATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCTTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAAACCCCTAAAAAAT‑‑‑AAAAAAAA                                                                                                               >  1:3557281/1‑128
              TAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCCATAAAAAT‑‑‑TAAAAAAAA                                                                                                              >  2:3893631/1‑128
              TAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCACCTTAAAAAT‑‑‑TAAAAAAAA                                                                                                              >  2:3830344/1‑128
              TAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCACCTTAAAAAA‑‑‑TAAAAAAAA                                                                                                              >  2:961798/1‑128
              TAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAAACACCTTAAAAAT‑‑‑TAAAAAAAA                                                                                                              >  2:3379997/1‑128
              TAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAAACACATAAAAAAT‑‑‑AAAAAAAAA                                                                                                              >  2:2255460/1‑128
              TAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTATATTTGTTAATCTTCACAAATAAAAAAAAAACATACCCCTTAAAAAT‑‑‑TAAAAAAAA                                                                                                              >  2:2108062/1‑128
              TAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCAAATTTTTTATTTGTTTAACTTCAAAAATAAAAAAAAAAAAATAAACTAAAAAAA‑‑‑TAAAAAAAA                                                                                                              >  2:1961376/1‑128
              TAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATACTCGTGATCTATTTTTTTATTTTTTTATCTTCACAAATAAAAAAAAAACAATCAAAATAAAAAT‑‑‑TAAAAAAAA                                                                                                              >  1:210871/1‑128
                  GTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCCTTAAAAAT‑‑‑TAAAAAAAAAAAA                                                                                                          >  2:3123388/1‑128
                  GTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCCATAAAAAT‑‑‑TAAAAAAAAAAAA                                                                                                          >  2:3776981/1‑128
                  GTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAAACCCATTAAAAAA‑‑‑AAAAAAAAAAAAA                                                                                                          >  2:2567394/1‑128
                   TTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCTTGATCTATTTTTTTATTTTTTTATCTTCACAAATAAAAAAAAAACAATCCCAATAAAAAA‑‑‑AAAAAAAAAAAAAA                                                                                                         >  2:320945/1‑128
                   TTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAAAAAAACCATAAAAAAA‑‑‑TAAAAAAAAAAAAA                                                                                                         >  2:1265363/1‑128
                   TTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTAACTTAACAAATAAAAAAAAAAAAAAACCATAAAAAAA‑‑‑TAAAAAAAAAAAAA                                                                                                         >  2:349852/1‑128
                    TAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCCTTAAAAAT‑‑‑TAAAAAAAAAAAAAA                                                                                                        >  2:3253134/1‑128
                     AAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATTTAGATCCTCGTGATCTATTTTTTTATTTTTTTATCATAACAAATAAAAAAAAAACAAACAAAAAAAAAAT‑‑‑AAAAAAAAAAAAAAAA                                                                                                       >  2:2499439/1‑128
                     AAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCCTTAAAAAT‑‑‑TAAAAAAAAAAAAAAA                                                                                                       >  2:1033698/1‑128
                     AAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCCTTAAAAAT‑‑‑TAAAAAAAAAAAAAAA                                                                                                       >  2:1297731/1‑128
                     AAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCCTTAAAAAT‑‑‑TAAAAAAAAAAAAAAA                                                                                                       >  2:3221976/1‑128
                     AAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCACCTTAAAAAT‑‑‑TAAAAAAAAAAAAAAA                                                                                                       >  2:845331/1‑128
                     AAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCAAAAATAAAAAAAAAAAATAACCCTAAAAAAT‑‑‑TAAAAAAAAAAAAAAA                                                                                                       >  2:3625316/1‑128
                     AAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATATTAACAAATAAAAAAAAACAATAAACTTAAAAAT‑‑‑AAAAAAAAAAAAAAAAA                                                                                                      >  2:2915/1‑128
                     AAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTAATTGTAAATCTTAACAAAAAAAAAAAAAACAAACCACTAAAAAAA‑‑‑TAAAAAAAAAAAAAAA                                                                                                       >  1:3094170/1‑128
                      AGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAACAATCCCCTTAAAAAT‑‑‑TAAAAAAAAAAAAAAAAA                                                                                                     >  1:3041044/1‑128
                      AGGTTAATTAAAATACCATAAACTTAATAATACTTATAATGTAGATCCTCGTGATCTATTATTTTATTTGTTTATCTTCACAAATAAAAAAAAAAAAATCACATAAAAAAA‑‑‑AAAAAAAAAAAAAAAAA                                                                                                      >  2:396462/1‑128
                       GGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTTTTTATCTTAACAAATAAAAAAAAAACAATACCATTAAAAAT‑‑‑AAAAAAAAAAAAAAAAAA                                                                                                     >  1:2551337/1‑128
                       GGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAAACCCCTTAAAAAT‑‑‑TAAAAAAAAAAAAAAAAA                                                                                                     >  2:3707136/1‑128
                       GGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAAAACACTAAAAAAT‑‑‑AAAAAAAAAAAAAAAAAA                                                                                                     >  2:2316245/1‑128
                       GGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCATCACAAATAAAAAAAAAAAAAACACCTAAAAAAA‑‑‑AAAAAAAAAAAAAAAAAA                                                                                                     >  2:2041705/1‑128
                        GTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAAAAATCACATAAAAAAT‑‑‑TAAAAAAAAAAAAAAAAAA                                                                                                    >  1:2266349/1‑128
                         TTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAATTAAAAAAAAAACAAAACCCTAAAAAAT‑‑‑AAAAAAAAAAAAAAAAAAAA                                                                                                   >  1:3396844/1‑128
                           AATTAAAATACCATAAACTTAATAATTCTTATAATGTATATCCTCGTGATCTATTTTTTTATTTTTTTATCTTCAAAAATAAAAAAAAAAAAAAAAACTTAAAAAT‑‑‑TAAAAAAAAAAAAAAAAAAAAa                                                                                                 >  1:2041202/1‑127
                           AATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCAAAAATAAAAAAAAAAAAATCACATTAAAAAT‑‑‑TAAAAAAAAAAAAAAAAAAAAa                                                                                                 >  1:3367581/1‑127
                           AATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTAACAAATAAAAAAAAAAACAAACCCATTAAAAAT‑‑‑TAAAAAAAAAAAAAAAAAAAA                                                                                                  >  1:3288389/1‑128
                            ATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCACTTAAAAAT‑‑‑TAAAAAAAAAAAAAAAAAAAAaa                                                                                                >  2:3807898/1‑126
                            ATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAAACCCCTTAAAAAT‑‑‑TAAAAAAAAAAAAAAAAAAAAaa                                                                                                >  2:1026002/1‑126
                             TTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCCTTAAAAAT‑‑‑TAAAAAAAAAAAAAAAAAAAAaaa                                                                                               >  2:352604/1‑125
                             TTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGAGATCTATTTTTATATTTGTTTATCTTCACAAATAAAAAAAAAAAAAAACCCTAAAAAAT‑‑‑TAAAAAAAAAAAAAAAAAAAAaaa                                                                                               >  2:435503/1‑125
                              TAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAAACCCCTTAAAAAT‑‑‑TAAAAAAAAAAAAAAAAAAAAaaaa                                                                                              >  2:449207/1‑124
                              TAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTAATTTATTAGATTATCTTCACAAATAAAAAAAAAAAAAAAACATAAAAAAT‑‑‑AAAAAAAAAAAAAAAAAAAAAaaaa                                                                                              >  2:2679465/1‑124
                                         aaaaaTAATAATTCTTATAATGTATATACTCGTTATATATTTTTTTATTTTTTTATCTTCACAAAAAAAAAAAAAAAAAACCCCTTAAAAAT‑‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCT                                                                                   <  1:3596006/123‑1
                                                    TTCTTATAATTTATATCCTCGTGTTCTATTTTTTTTTTTGTTTATATTAAAAAAAAAAAAAAAAAAAATACCCTTAAAAATT‑‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAA                                                                         <  1:2643029/128‑1
                                                               TAGATCCTGCTGATCTAATTTTTTTTTTGTTAATCTTAAAAAATAAAAAAAAAAAAATCCCCTTAAAAAT‑‑‑TAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATA                                                            <  2:500051/128‑1
                                                                   taatagttataTATTTTTTTATTTTTTTATATAAAAAAAAAAAAAAAAAAAAATCCCCTTAAAAATT‑‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACC                                                          <  1:320945/117‑1
                                                                        tataaattTTTTTTTATTTTTTTAATTTAAAAAAAAAAAAAAAAAAAATACCCTTAAAAATT‑‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATT                                                     <  1:648460/120‑1
                                                                         ttttaTATTTTTTTTTTTTTTTATATTTAAAAATAAAAAAAAAAAAATACACTTAAAAATT‑‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTT                                                    <  2:3648701/123‑1
                                                                         ttataaaaTTTTTTTTTTTTTTATTTTAAAAAAAAAAAAAAAAACAATCCCCTTAAAAAA‑‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTT                                                   <  1:850859/120‑1
                                                                         ttataTATTTTTTTATTTTTTTATAATAAAAAAAAAAAAAAAAAAAAAACCCTTAAAAAA‑‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTT                                                   <  1:3960216/123‑1
                                                                         gttttaATTTTTTAATTTTTTTATTTTCAAAAATAAAAAAAAAAAAAACCCCTAAAAAATTAAAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATT                                                     <  1:1265363/122‑1
                                                                          tataTATTTTTTTATTTTTTTATATTAAAAAAAAAAAAAAAAAAAATCCCCTTAAAAATTAAAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTT                                                    <  1:2499439/124‑1
                                                                              TATTTTTTTAATTTTTTATATTAAAAAAAAAAAAAAAAACAATCCCCTTAAAAAT‑‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTT                                              <  1:3106958/128‑1
                                                                                 TTTTTTATTTTTTTATTTTAAAAAATAAAAAAAAAAAAATCCCCTTAAAAAT‑‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAA                                           <  2:4014701/128‑1
                                                                                   TTTTTTTTTTTTTTTTTAAAAAATTAAAAAAAAAAAATTCCCTTAAAAATTAAAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAA                                           <  1:5655/128‑1
                                                                                    TTTATTTTTTTTTATTAAAAAAAAAAAAAAAAAAAATACCCTTAAAAATTAAAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAA                                          <  2:3464418/128‑1
                                                                                     tttaTTGTTTATATTACAAAAAAAATAAAAAAAAATCCCCTTAAAAAAT‑‑‑ATAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAAT                                        <  1:2053931/124‑1
                                                                                      TATTTTTTAAACTTAAAAAAAAAAAAAAAAACAATCCCCTTAAAAATT‑‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATA                                       <  1:3415340/128‑1
                                                                                       ATTTTTTTATTTTAAAAAATTAATAAAAAAAAATTCCCTTTAAAAA‑‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAG                                     <  1:1498689/128‑1
                                                                                       ATTTTTTTATATTAAAAAATAAAAAAAAAAAAATCCCCTTAAAAAT‑‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAG                                     <  1:2033044/128‑1
                                                                                        TTTTTTTATATTAAAAAATAAAAAAAAAACAATCCCCTTAAAAAT‑‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGA                                    <  1:1396057/128‑1
                                                                                        TTTTTTTATATTAAAAAAAAAAAAAAAAAAAAACCCCTTAAAAATTAAAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAA                                      <  1:1979354/128‑1
                                                                                         tttTTTATATTAAAAATTAAAAAAAAAAAAATACACTTTAAAAAT‑‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGA                                    <  1:1812115/125‑1
                                                                                            tatattaaaaaAAAAAAAAAAAAAAAAATCATTAAAAAAAT‑‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATT                                <  2:3444997/117‑1
                                                                                             ttttaataaaAAAAAAAAAAAAAAAAAAACCCTTAAAAATT‑‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATT                                <  2:3074780/118‑1
                                                                                             tttattaaaaAAAAAAAAAAAAAAAAAAAACATTAAAATT‑‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTG                               <  2:2126336/118‑1
                                                                                             tttaatttaaAAAAAAAAAAAAAAAAATACCAATAAAAATT‑‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATT                                <  1:3909282/118‑1
                                                                                             TTATATTAAAAAATAAAAAAAAAAAAATCCACTTAAAAATTAAAAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATA                                  <  1:3145997/128‑1
                                                                                              ttaattaaaAAATAAAAAAAAAAAAATAACCTTAAAAATT‑‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTG                               <  2:3904721/119‑1
                                                                                               atattaaaAAATAAAAAAAAAACAAAACCCTTAAAAAA‑‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGAC                             <  1:3660835/120‑1
                                                                                               aattaaaaAAAAAAAAAAAAAAAAAAACATTAAAAAATA‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGA                              <  1:1099202/120‑1
                                                                                               aaaataaaAAAAAAAAAAAAAAAAATACACATAAAAAAT‑‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGA                              <  1:794742/120‑1
                                                                                                aattaACAAAAAAAAAAAAAAAAAAACCCTTAAAAAA‑‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACA                            <  1:261589/123‑1
                                                                                                 attaaaAAAAAAAAAAAAAAAAAAACCCTTAAAAATT‑‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACA                            <  1:1339680/122‑1
                                                                                                 aataaaAAAAAAAAAAAAAAAAAAAACATTAAAAAT‑‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACAT                           <  1:1127967/122‑1
                                                                                                  ttaatAAATAAAAAAAAAAAAATAACCTTAAAAATT‑‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACAT                           <  1:449207/123‑1
                                                                                                  ataACAAAAAAAAAAAAAAAAATACCATTAAAAAATA‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACA                            <  1:3730128/125‑1
                                                                                                   taaaAAAAAAAAAAAAAAAAATACCCTTAAAA‑‑‑AATAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATA                       <  1:3578690/124‑1
                                                                                                       AAAAAAAAAAAAAAAAAACCATTAAAAATT‑‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATA                     <  1:492247/128‑1
                                                                                                       AAAAAAAAAAAAAAAAAACACTTAAAAATT‑‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATA                     <  1:3459231/128‑1
                                                                                                          aaAAAAAAAAAAAAAAACCCTTAAAAAT‑‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATA                   <  1:961798/126‑1
                                                                                                          TAAAAAAAAAAAAATACAAATTAAAAAT‑‑‑ATAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATAT                    <  1:1597874/128‑1
                                                                                                           aAAAAAAAAAAAAATCCCCTTAAAAATT‑‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATA                   <  1:2310918/127‑1
                                                                                                            AAAAAAAAAAAAATACCTTTTAAATT‑‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATC                 <  1:1026002/128‑1
                                                                                                               AAAAAAAAAAACCCATAAAAAAT‑‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAA              <  1:3501565/128‑1
                                                                                                               AAAAAAAAAAACACCTTAAAAATT‑‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTA               <  1:3823688/128‑1
                                                                                                                    AAAAAATACCCTTAAAAAT‑‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATA          <  1:3467963/128‑1
                                                                                                                       aaaatctatTTATAATT‑‑‑AAAAAAAAAAAAAAAAAAAAACTAAATACTAACTCTATTTCTTAATATTCCATATTATACCAAATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATA        <  1:1574941/119‑1
                                                                                                                       aAATACCCTTAAAAAT‑‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATAT       <  1:3257897/127‑1
                                                                                                                             acaTTAAAAAT‑‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATATAATAC  <  1:4000906/125‑1
                                                                                                                                                                                                                                                                   
GTTAGTGTAAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAATAAAAAAAAAACAATCCCCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP016816/202360‑202486
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAAAAT‑‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATATAATAC  >  CP016816/202490‑202612

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.